Clone Sequence Records
BS17582.complete Sequence
1877 bp assembled on 2009-12-07
GenBank Submission: KX802510
> BS17582.complete
GAAGTTATCAGTCGACATGGCAACCTCAGCGATCGGCGGGGCGGGCGTGG
GCGTGGCTGCCTCCGGTCCAGTGCGACGACCCACTGCCAGAGCCACCGCC
GGAATCCAGAGACGCAGGGTGGTCAAGAAGCACATCCAGCAAAAGTATAT
GCTCTGCGGCTTCGCCATACACGCTTTCCTGGCCACACCCGCCTATCTGT
ACGGGAACGTGGTGGAGTCCGACAAGGATCTGGTGTTGAGGATATGGCCG
GCGATCGTTTACCAGGCCACAGGCGAGCTCTGCCGCTCGATCATGGAGCA
CTTGGACACAGAGTACAGTGGCAGATCGAGGGAGACGACGCAGTACCGAC
GGGTCTTCCTCCTGGCCACGCTCATTGCCTGCGTATCGCTGATGGTCAGC
GGGATCCTGTTCTCCTCCGCCTGGATCGTGGTCACAACCACCACACAGGT
GGTAGCTATTGTCTTCTACGGATTCTTTGCAGGTATCGGCTCCAGCTTGT
ACCTGTGGAAGACGCACGTCATTCTGGAGGCAGTGCGTCCGCGGGAGGAC
AAGTACGTCCGCAAGACGATCCACCTGTGCGGCGAGGCCTTCTGCCAGCT
GTTCCTCTCGTTCGTGTTCACCAGCCTGCGCACCTTGTACGGCACCGCCC
AGTCCATCGTACTGATGTCCGCCCTGCTGGTGAACCTCATCCCGCTGAGC
CTGATCATTACCAAGCATCGCGAGGATGCCTTCACCACGAAGCGGATATC
GGTGATCAAGGCGGAAACGGGATTCGCTGCACTGCCGCTGCGAGCCGCAC
TGGCGGCCAACTTGGTGGCGGACCAGCTGGACGGATTGGACACGCTCTCA
TGGCGGAATCCGGCCACCACCGAAATGGCCACGCCCAGTGGTGCCGTCGC
CGCCGCTGTGGTGGTGGACACGCACAGCAACTACATGCTGGCCACCGATG
AGGCGTATGTGACGTATGTGAATCCCAACGGGGTGGAGATTATGGAGATC
ATACCCGAGGAGGACGAGACGGTGTCCATGATGCGGTCGAGCAATGCGAC
CATCGACAATTATGCCATGTCCGCCTCGCAGATGTCGCACAAGTCCCTGT
CCAATGGACGTCTCTATCCACTGACGCCCCAGCATCCTTTGGGCACAGGA
ACGGGAACTGGTACAGGTAGCTCCTCACCCCTACCTCCCGATTATGCCAA
CCTGCGCCGCATCCGGCGGATGTCGCGTGCGGTAACCACGCACCTGTGGT
GGAATCTGCTGGACAAGATCGCCATGCCGCTGCAGCAGGCGCTGCTGGTG
CCGCAGCTGTACGCCACCACGCTGCTCCTCTCGGCGGACATCTTTAGCTA
CGTGATGTGCCTGACGGTGCTACCCGGACTGGCGGTCAGCCACCATGCGC
TGAAGAACGCCGAGATCCCGTTCCTCTTCTCGCTGCTGGCCTTCCCATGG
ATGTGCTTCTCCCTGATGACTCCGCGCTTCGGCACGAGCCTCTATAAGCG
GAAGCTCCAGTGGCACACGCTGGGCAGCATCTGCAAGTGCCTGGCGCTGA
TCTTCATCAGCTTCTCCACCTCCAAGCTGCTGCTCAGTGTGTCCGCCGTG
CTGCTGGGATTTGGCCAGGTGGTGACCGCCTTTCTGCAGGAGCTGGTCTT
CCAGATGGGCATGACGCGGGCCAACTGGACGGCCATCCGCCGTCCGGTGC
ACTTCACCAACGGCCTGCTGGTTCTCCTCTGGGGCGCGCTGGCCCACTGG
GTGGTGGAGCGGTACTCCTTCCAGGCCACCGTGGGACTGGCCGGCGCCCT
TTACGGAACTACCACGCTGCTCTGGAACTTCCTCTTCTTCTGCTGCCAGA
GCAAGGATTGAAAGCTTTCTAGACCAT
BS17582.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:06:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14195-RB | 1845 | CG14195-PB | 1..1845 | 17..1861 | 9225 | 100 | Plus |
| CG14195-RA | 1845 | CG14195-PA | 1..1845 | 17..1861 | 9225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:06:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14195-RB | 2696 | CG14195-RB | 725..2569 | 17..1861 | 9225 | 100 | Plus |
| CG14195-RA | 2123 | CG14195-RA | 152..1996 | 17..1861 | 9225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:06:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19209619..19210342 | 1204..481 | 3620 | 100 | Minus |
| X | 23542271 | X | 19209198..19209547 | 1553..1204 | 1750 | 100 | Minus |
| X | 23542271 | X | 19210836..19211148 | 485..173 | 1565 | 100 | Minus |
| X | 23542271 | X | 19208821..19209128 | 1861..1554 | 1540 | 100 | Minus |
| X | 23542271 | X | 19211202..19211358 | 173..17 | 785 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:06:26 has no hits.
BS17582.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:45:40 Download gff for
BS17582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14195-RA | 1..1844 | 17..1860 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:06:03 Download gff for
BS17582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14195-RA | 152..1995 | 17..1860 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:01:38 Download gff for
BS17582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14195-RA | 1..1844 | 17..1860 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:06 Download gff for
BS17582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14195-RA | 152..1995 | 17..1860 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:06 Download gff for
BS17582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19208822..19209128 | 1554..1860 | 100 | <- | Minus |
| X | 19209198..19209546 | 1205..1553 | 100 | <- | Minus |
| X | 19209619..19210340 | 483..1204 | 100 | <- | Minus |
| X | 19210839..19211148 | 173..482 | 100 | <- | Minus |
| X | 19211203..19211358 | 17..172 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:06:03 Download gff for
BS17582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19105236..19105391 | 17..172 | 100 | | Minus |
| arm_X | 19102855..19103161 | 1554..1860 | 100 | <- | Minus |
| arm_X | 19103231..19103579 | 1205..1553 | 100 | <- | Minus |
| arm_X | 19103652..19104373 | 483..1204 | 100 | <- | Minus |
| arm_X | 19104872..19105181 | 173..482 | 100 | <- | Minus |
BS17582.3prime Sequence
867 bp (779 high quality bases) assembled on 2007-05-15
> BS17582.3prime
ATGGTCTAGAAAGCTTTCAATCCTTGCTCTGGCAGCAGAAGAAGAGGAAG
TTCCAGAGCAGCGTGGTAGTTCCGTAAAGGGCGCCGGCCAGTCCCACGGT
GGCCTGGAAGGAGTACCGCTCCACCACCCAGTGGGCCAGCGCGCCCCAGA
GGAGAACCAGCAGGCCGTTGGTGAAGTGCACCGGACGGCGGATGGCCGTC
CAGTTGGCCCGCGTCATGCCCATCTGGAAGACCAGCTCCTGCAGAAAGGC
GGTCACCACCTGGCCAAATCCCAGCAGCACGGCGGACACACTGAGCAGCA
GCTTGGAGGTGGAGAAGCTGATGAAGATCAGCGCCAGGCACTTGCAGATG
CTGCCCAGCGTGTGCCACTGGAGCTTCCGCTTATAGAGGCTCGTGCCGAA
GCGCGGAGTCATCAGGGAGAAGCACATCCATGGGAAGGCCAGCAGCGAGA
AGAGGAACGGGATCTCGGCGTTCTTCAGCGCATGGTGGCTGACCGCCAGT
CCGGGTAGCACCGTCAGGCACATCACGTAGCTAAAGATGTCCGCCGAGAG
GAGCAGCGTGGTGGCGTACAGCTGCGGCACCAGCAGCGCCTGCTGCAGCG
GCATGGCGATCTTGTCCAGCAGATTCCACCACAGGTGCGTGGTTACCGCA
CGCGACATCCGCCGGATGCGGCGCAGGTTGGCATAATCGGGAGGTAGGGG
TGAGGAGCTACCTGTACCAGTTCCCGTTCCTGTGCCCAAAGGATGCTGGG
GCGTCAGTGGATAGAGACGTCCATTGGACAGGGACTTGTGCGACATCTGC
GAGGCGGACATGGCATAATTGTCGATGGTCGCATTGCTCGACCGCATCAT
GGACCCCGTCTCGTCCT
BS17582.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:53:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14195-PA | 1845 | CG14195-RA | 995..1845 | 867..17 | 4230 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:01:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14195-RB | 2696 | CG14195-RB | 1719..2569 | 867..17 | 4240 | 99.9 | Minus |
| CG14195-RA | 2123 | CG14195-RA | 1146..1996 | 867..17 | 4240 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:01:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19209198..19209547 | 325..674 | 1750 | 100 | Plus |
| X | 23542271 | X | 19208821..19209128 | 17..324 | 1540 | 100 | Plus |
| X | 23542271 | X | 19209619..19209812 | 674..867 | 955 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-02-13 12:01:42 has no hits.
BS17582.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:53:23 Download gff for
BS17582.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14195-PA | 995..1845 | 17..867 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:56:29 Download gff for
BS17582.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14195-RA | 1146..1996 | 17..867 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:22:25 Download gff for
BS17582.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14195-RA | 1146..1996 | 17..867 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:22:25 Download gff for
BS17582.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19208821..19209128 | 17..324 | 100 | <- | Plus |
| X | 19209198..19209546 | 325..673 | 100 | <- | Plus |
| X | 19209619..19209812 | 674..867 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:56:29 Download gff for
BS17582.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19102854..19103161 | 17..324 | 100 | <- | Plus |
| arm_X | 19103231..19103579 | 325..673 | 100 | <- | Plus |
| arm_X | 19103652..19103845 | 674..867 | 99 | | Plus |
BS17582.5prime Sequence
754 bp (753 high quality bases) assembled on 2007-05-15
> BS17582.5prime
GAAGTTATCAGTCGACATGGCAACCTCAGCGATCGGCGGGGCGGGCGTGG
GCGTGGCTGCCTCCGGTCCAGTGCGACGACCCACTGCCAGAGCCACCGCC
GGAATCCAGAGACGCAGGGTGGTCAAGAAGCACATCCAGCAAAAGTATAT
GCTCTGCGGCTTCGCCATACACGCTTTCCTGGCCACACCCGCCTATCTGT
ACGGGAACGTGGTGGAGTCCGACAAGGATCTGGTGTTGAGGATATGGCCG
GCGATCGTTTACCAGGCCACAGGCGAGCTCTGCCGCTCGATCATGGAGCA
CTTGGACACAGAGTACAGTGGCAGATCGAGGGAGACGACGCAGTACCGAC
GGGTCTTCCTCCTGGCCACGCTCATTGCCTGCGTATCGCTGATGGTCAGC
GGGATCCTGTTCTCCTCCGCCTGGATCGTGGTCACAACCACCACACAGGT
GGTAGCTATTGTCTTCTACGGATTCTTTGCAGGTATCGGCTCCAGCTTGT
ACCTGTGGAAGACGCACGTCATTCTGGAGGCAGTGCGTCCGCGGGAGGAC
AAGTACGTCCGCAAGACGATCCACCTGTGCGGCGAGGCCTTCTGCCAGCT
GTTCCTCTCGTTCGTGTTCACCAGCCTGCGCACCTTGTACGGCACCGCCC
AGTCCATCGTACTGATGTCCGCCCTGCTGGTGAACCTCATCCCGCTGAGC
CTGATCATTACCAAGCATCGCGAGGATGCCTTCACCACGAAGCGGATATC
GGTG
BS17582.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:46:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14195-PA | 1845 | CG14195-RA | 1..738 | 17..754 | 3690 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:49:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14195-RB | 2696 | CG14195-RB | 725..1462 | 17..754 | 3690 | 100 | Plus |
| CG14195-RA | 2123 | CG14195-RA | 152..889 | 17..754 | 3690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:49:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19210836..19211148 | 485..173 | 1565 | 100 | Minus |
| X | 23542271 | X | 19210069..19210342 | 754..481 | 1370 | 100 | Minus |
| X | 23542271 | X | 19211202..19211358 | 173..17 | 785 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:49:48 has no hits.
BS17582.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:46:59 Download gff for
BS17582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14195-PA | 1..738 | 17..754 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:51:15 Download gff for
BS17582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14195-RA | 145..889 | 9..754 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:25:06 Download gff for
BS17582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14195-RA | 145..889 | 9..754 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:25:06 Download gff for
BS17582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19210069..19210340 | 483..754 | 100 | <- | Minus |
| X | 19210839..19211148 | 173..482 | 100 | <- | Minus |
| X | 19211203..19211365 | 9..172 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:51:15 Download gff for
BS17582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19104102..19104373 | 483..754 | 100 | <- | Minus |
| arm_X | 19104872..19105181 | 173..482 | 100 | <- | Minus |
| arm_X | 19105236..19105398 | 9..172 | 98 | | Minus |
BS17582.pep Sequence
Translation from 16 to 1860
> BS17582.pep
MATSAIGGAGVGVAASGPVRRPTARATAGIQRRRVVKKHIQQKYMLCGFA
IHAFLATPAYLYGNVVESDKDLVLRIWPAIVYQATGELCRSIMEHLDTEY
SGRSRETTQYRRVFLLATLIACVSLMVSGILFSSAWIVVTTTTQVVAIVF
YGFFAGIGSSLYLWKTHVILEAVRPREDKYVRKTIHLCGEAFCQLFLSFV
FTSLRTLYGTAQSIVLMSALLVNLIPLSLIITKHREDAFTTKRISVIKAE
TGFAALPLRAALAANLVADQLDGLDTLSWRNPATTEMATPSGAVAAAVVV
DTHSNYMLATDEAYVTYVNPNGVEIMEIIPEEDETVSMMRSSNATIDNYA
MSASQMSHKSLSNGRLYPLTPQHPLGTGTGTGTGSSSPLPPDYANLRRIR
RMSRAVTTHLWWNLLDKIAMPLQQALLVPQLYATTLLLSADIFSYVMCLT
VLPGLAVSHHALKNAEIPFLFSLLAFPWMCFSLMTPRFGTSLYKRKLQWH
TLGSICKCLALIFISFSTSKLLLSVSAVLLGFGQVVTAFLQELVFQMGMT
RANWTAIRRPVHFTNGLLVLLWGALAHWVVERYSFQATVGLAGALYGTTT
LLWNFLFFCCQSKD*
BS17582.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:35:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14195-PB | 614 | CG14195-PB | 1..614 | 1..614 | 3149 | 100 | Plus |
| CG14195-PA | 614 | CG14195-PA | 1..614 | 1..614 | 3149 | 100 | Plus |
