Clone BS17585 Report

Search the DGRC for BS17585

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:175
Well:85
Vector:pDNR-Dual
Associated Gene/TranscriptCG6053-RB
Protein status:BS17585.pep: full length peptide match
Sequenced Size:1763

Clone Sequence Records

BS17585.3prime Sequence

847 bp (720 high quality bases) assembled on 2007-05-15

> BS17585.3prime
ATGGTCTAGAAAGCTTTCACCCTCCTCCGCATCCTCTACGCTTTCCGCCT
GGCAGCCGCCTTTGGCGTTCCTGTTCCACGGCCGCAAAGTATTCCGAGGC
AGCTTGCTCGCAAGCTGCTTCAAACGGAGCCATGTTGATCTTTCCGTTGA
CCATCATTGTGTCCCCCTGATCCTGGCCATGGTTGGCCTTGACTTTCAGC
TTGCTTTCCCGGGACTTGGCCTCCAGGATCTTCTCGCGACGGTTCTCGCG
CTCGAACATGGCTGTTAGTAGGGGTTTGTCGTTCTTGGCTGACATGACCA
TGTTGTCGGAGACTTCGACGAGAAAAGTGGCTCCCAGCTGGCTGCCACAG
CTCACGAATTTCCCGTTCTCGTTGGTCCGGACACAATAAAGAGGTTCATC
GCACACCTTGACCGTGAGAACGGGCTCGTTCTGCTGCTGCAGCAGATCCC
AGGTGTCCAAGACGCCATCCATGCGAGTGATAAAGAACTGGGAGACTTTC
GTGTAACTCCAAGCGCCATCGGTCAGCATCGAGCTGCTGCTCTTGGTCCA
GATGATGGAGCTCTCTCTGCAATCCTCCGACCAGATTCGGGCACACCAGT
CGCCCACAGTTAGGAAATTCTTAACAAACGCCGGATTTCGGGTAATGGCA
TACACCGGGCCGAGGTGGCACATCATCCGTATCTGAATCTTCTCCGTGGG
CGTCTTGCCCTTTCGATTGCAGGAGAAGAGCATGCCCATCTCAGTTCCCG
CCATGAATCTTGTAGGTATGGTGGTCTCGTACTCTAGCACTGATATTCCA
TAGGATCTGGAGAGATCCTGATCGTCACTCTTCACCGGATCCATGAG

BS17585.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:50:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG6053-PA 1716 CG6053-RA 901..1712 847..36 4060 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:06:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG6053-RB 1885 CG6053-RB 938..1768 847..17 4140 99.9 Minus
CG6053-RC 1881 CG6053-RC 938..1764 847..17 4070 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:06:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11697625..11697862 260..497 1190 100 Plus
3L 28110227 3L 11697342..11697565 36..259 1120 100 Plus
3L 28110227 3L 11697918..11698097 498..677 900 100 Plus
3L 28110227 3L 11698156..11698326 677..847 855 100 Plus
Blast to na_te.dros performed on 2015-02-13 06:06:43 has no hits.

BS17585.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:50:20 Download gff for BS17585.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6053-PA 901..1716 32..847 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:49:15 Download gff for BS17585.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6053-RB 938..1774 9..847 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:04:51 Download gff for BS17585.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6053-RB 938..1774 9..847 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:04:51 Download gff for BS17585.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 11697625..11697862 260..497 100 <- Plus
3L 11697918..11698096 498..676 100 <- Plus
3L 11698156..11698326 677..847 100   Plus
3L 11697342..11697565 36..259 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:49:15 Download gff for BS17585.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11690442..11690665 36..259 100 <- Plus
arm_3L 11690725..11690962 260..497 100 <- Plus
arm_3L 11691018..11691196 498..676 100 <- Plus
arm_3L 11691256..11691426 677..847 100   Plus

BS17585.5prime Sequence

847 bp (816 high quality bases) assembled on 2007-05-15

> BS17585.5prime
GAAGTTATCAGTCGACATGGAATATATATTCAAGAAGGAGCGACGCTCCT
TTGGAGCCCGTGTTCACTTCGAGGACAAAGATGAGGTGGTGTTCACCGAG
AACTCGAATCCGGAGCTAGTCAAGAGCTACATTCTCAAAAACCCCGTGGA
CCGGGTGACGCAATACGCCGGACAAACCTCACTGAGTGTGGCCAATACGG
AAAGGGCAACGTACAAGAGTACGGGAATCACCCACAATGAGGGCGGATGG
CCAAAGGACATCAACATGCATGACCCGGAGCAGACGGTGCGATACAAGCG
GAAAATCGAGAAAGACGAGAATTATATCACCCAGGTGATGAATCTGACCA
AGCCCATGGAGCACTACATCCACCAAAACAATGCGGTCAACATCTATGAG
AACTACTTCGAAAATCTCGATCCAGCTCCACTGCCCGAGCCTTGTAAGTC
GCGCACGGTCAATGTGTACAGGGATCCCAATCCCATAAAGGTGCCAGTGA
AGCATTTGTCCTGGTCACCGGATGGCGGCATCAAAATGGCCGTCAGTCAT
TGCGACATGCGGTTCCAGGGCGACAAGTCCAACCAGAAGTGCAACTCGTA
CATATGGGAGGTGGAGAATCCCAACGAACCCTTCCTCACCCTGGAACCGA
AGGTGCCGTGCGTGTGTCTCGAGTACAACCAGAAGGATCCAACCAGTCTC
GTGAGTGGCATGTACAATGGTCAGGTGGCCGCCTGGGACACGCGACATGG
CAAACTACCAGTTATGATCAGCGAACGGGAGGTGTGCCATCGGGATCCGG
TTAACTCGGTGCTTTGGAACATTTCCAAGAGTGGCACAGAGTTCTTC

BS17585.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:44:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG6053-PA 1716 CG6053-RA 1..831 17..847 4130 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:44:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG6053-RC 1881 CG6053-RC 38..868 17..847 4140 99.9 Plus
CG6053-RB 1885 CG6053-RB 38..868 17..847 4140 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:44:44
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11698396..11699226 847..17 4140 99.9 Minus
Blast to na_te.dros performed on 2015-02-10 17:44:47 has no hits.

BS17585.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 18:44:17 Download gff for BS17585.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6053-PA 1..831 17..847 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:17:17 Download gff for BS17585.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6053-RB 23..868 2..847 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:41:36 Download gff for BS17585.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6053-RB 23..868 2..847 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:41:36 Download gff for BS17585.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 11698396..11699241 2..847 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:17:17 Download gff for BS17585.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11691496..11692341 2..847 99   Minus

BS17585.complete Sequence

1763 bp assembled on 2012-04-25

GenBank Submission: KX800363

> BS17585.complete
GAAGTTATCAGTCGACATGGAATATATATTCAAGAAGGAGCGACGCTCCT
TTGGAGCCCGTGTTCACTTCGAGGACAAAGATGAGGTGGTGTTCACCGAG
AACTCGAATCCGGAGCTAGTCAAGAGCTACATTCTCAAAAACCCCGTGGA
CCGGGTGACGCAATACGCCGGACAAACCTCACTGAGTGTGGCCAATACGG
AAAGGGCAACGTACAAGAGTACGGGAATCACCCACAATGAGGGCGGATGG
CCAAAGGACATCAACATGCATGACCCGGAGCAGACGGTGCGATACAAGCG
GAAAATCGAGAAAGACGAGAATTATATCACCCAGGTGATGAATCTGACCA
AGCCCATGGAGCACTACATCCACCAAAACAATGCGGTCAACATCTATGAG
AACTACTTCGAAAATCTCGATCCAGCTCCACTGCCCGAGCCTTGTAAGTC
GCGCACGGTCAATGTGTACAGGGATCCCAATCCCATAAAGGTGCCAGTGA
AGCATTTGTCCTGGTCACCGGATGGCGGCATCAAAATGGCCGTCAGTCAT
TGCGACATGCGGTTCCAGGGCGACAAGTCCAACCAGAAGTGCAACTCGTA
CATATGGGAGGTGGAGAATCCCAACGAACCCTTCCTCACCCTGGAACCGA
AGGTGCCGTGCGTGTGTCTCGAGTACAACCAGAAGGATCCAACCAGTCTC
GTGAGTGGCATGTACAATGGTCAGGTGGCCGCCTGGGACACGCGACATGG
CAAACTACCAGTTATGATCAGCGAACGGGAGGTGTGCCATCGGGATCCGG
TTAACTCGGTGCTTTGGAACAATTCCAAGAGTGGCACAGAGTTCTTCTCC
GGCGGTTCCGATGGTCAGGTGCTGTGGTGGGATACCAGGAAGCTTACCGA
ACCGCTGGACCGCCTGCTCATGGATCCGGTGAAGAGTGACGATCAGGATC
TCTCCAGATCCTATGGAATATCAGTGCTAGAGTACGAGACCACCATACCT
ACAAGATTCATGGCGGGAACTGAGATGGGCATGCTCTTCTCCTGCAATCG
AAAGGGCAAGACGCCCACGGAGAAGATTCAGATACGGATGATGTGCCACC
TCGGCCCGGTGTATGCCATTACCCGAAATCCGGCGTTTGTTAAGAATTTC
CTAACTGTGGGCGACTGGTGTGCCCGAATCTGGTCGGAGGATTGCAGAGA
GAGCTCCATCATCTGGACCAAGAGCAGCAGCTCGATGCTGACCGATGGCG
CTTGGAGTTACACGAAAGTCTCCCAGTTCTTTATCACTCGCATGGATGGC
GTCTTGGACACCTGGGATCTGCTGCAGCAGCAGAACGAGCCCGTTCTCAC
GGTCAAGGTGTGCGATGAACCTCTTTATTGTGTCCGGACCAACGAGAACG
GGAAATTCGTGAGCTGTGGCAGCCAGCTGGGAGCCACTTTTCTCGTCGAA
GTCTCCGACAACATGGTCATGTCAGCCAAGAACGACAAACCCCTACTAAC
AGCCATGTTCGAGCGCGAGAACCGTCGCGAGAAGATCCTGGAGGCCAAGT
CCCGGGAAAGCAAGCTGAAAGTCAAGGCCAACCATGGCCAGGATCAGGGG
GACACAATGATGGTCAACGGAAAGATCAACATGGCTCCGTTTGAAGCAGC
TTGCGAGCAAGCTGCCTCGGAATACTTTGCGGCCGTGGAACAGGAACGCC
AAAGGCGGCTGCCAGGCGGAAAGCGTAGAGGATGCGGAGGAGGCTGAAAG
CTTTCTAGACCAT

BS17585.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:11:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG6053-RB 1731 CG6053-PB 1..1731 17..1747 8655 100 Plus
CG6053-RC 1758 CG6053-PC 1..1727 17..1747 8560 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:11:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG6053-RB 1885 CG6053-RB 38..1768 17..1747 8655 100 Plus
CG6053-RC 1881 CG6053-RC 38..1764 17..1747 8560 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:11:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11698156..11699226 1087..17 5355 100 Minus
3L 28110227 3L 11697625..11697862 1504..1267 1190 100 Minus
3L 28110227 3L 11697342..11697565 1728..1505 1120 100 Minus
3L 28110227 3L 11697918..11698097 1266..1087 900 100 Minus
Blast to na_te.dros performed on 2014-11-28 12:11:09 has no hits.

BS17585.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:17:00 Download gff for BS17585.complete
Subject Subject Range Query Range Percent Splice Strand
CG6053-RA 23..1753 2..1732 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 15:17:30 Download gff for BS17585.complete
Subject Subject Range Query Range Percent Splice Strand
CG6053-RB 38..1767 17..1746 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:27 Download gff for BS17585.complete
Subject Subject Range Query Range Percent Splice Strand
CG6053-RB 38..1767 17..1746 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:06:16 Download gff for BS17585.complete
Subject Subject Range Query Range Percent Splice Strand
CG6053-RA 38..1753 17..1732 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:58:58 Download gff for BS17585.complete
Subject Subject Range Query Range Percent Splice Strand
CG6053-RB 38..1767 17..1746 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:58:58 Download gff for BS17585.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11697625..11697862 1267..1504 100 <- Minus
3L 11697918..11698096 1088..1266 100 <- Minus
3L 11697342..11697565 1505..1728 100 <- Minus
3L 11697244..11697261 1729..1746 100 <- Minus
3L 11698156..11699226 17..1087 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:27 Download gff for BS17585.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11690442..11690665 1505..1728 100 <- Minus
arm_3L 11690725..11690962 1267..1504 100 <- Minus
arm_3L 11691018..11691196 1088..1266 100 <- Minus
arm_3L 11690344..11690361 1729..1746 100 <- Minus
arm_3L 11691256..11692326 17..1087 100   Minus

BS17585.pep Sequence

Translation from 16 to 1746

> BS17585.pep
MEYIFKKERRSFGARVHFEDKDEVVFTENSNPELVKSYILKNPVDRVTQY
AGQTSLSVANTERATYKSTGITHNEGGWPKDINMHDPEQTVRYKRKIEKD
ENYITQVMNLTKPMEHYIHQNNAVNIYENYFENLDPAPLPEPCKSRTVNV
YRDPNPIKVPVKHLSWSPDGGIKMAVSHCDMRFQGDKSNQKCNSYIWEVE
NPNEPFLTLEPKVPCVCLEYNQKDPTSLVSGMYNGQVAAWDTRHGKLPVM
ISEREVCHRDPVNSVLWNNSKSGTEFFSGGSDGQVLWWDTRKLTEPLDRL
LMDPVKSDDQDLSRSYGISVLEYETTIPTRFMAGTEMGMLFSCNRKGKTP
TEKIQIRMMCHLGPVYAITRNPAFVKNFLTVGDWCARIWSEDCRESSIIW
TKSSSSMLTDGAWSYTKVSQFFITRMDGVLDTWDLLQQQNEPVLTVKVCD
EPLYCVRTNENGKFVSCGSQLGATFLVEVSDNMVMSAKNDKPLLTAMFER
ENRREKILEAKSRESKLKVKANHGQDQGDTMMVNGKINMAPFEAACEQAA
SEYFAAVEQERQRRLPGGKRRGCGGG*

BS17585.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:21:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG6053-PB 576 CG6053-PB 1..576 1..576 3099 100 Plus
CG6053-PC 585 CG6053-PC 1..570 1..570 3057 99.8 Plus
CG1571-PA 651 CG1571-PA 5..533 2..520 894 35 Plus
CG10859-PB 627 CG10859-PB 7..538 2..518 751 32.6 Plus
CG10859-PA 627 CG10859-PA 7..538 2..518 751 32.6 Plus