Clone Sequence Records
BS17603.complete Sequence
2945 bp assembled on 2009-12-07
GenBank Submission: KX803697
> BS17603.complete
GAAGTTATCAGTCGACATGGGCGACTATCACGAGTTCACGGACCAGTACA
AGGTGCCGGTGATAGCGAAGCTACTCCACGCCCTGCCCCACTATAACATC
ACGTTCCACAAGATCAACAGCACGTTCCGGCCCAACGATGAGATCTACCT
GGAGAGCCTGGGCATTCTGGGCTCGGTTCCGGCTGCCCTGCTGATCGTCT
CGCTGCTGGGACTGCTCTTCTATCTCATGACCCGCTGCTGTGACCGGAAG
CCCCGGCCAGCCCACTCGATCACTAGCCTGAAGGTGGCCCTGTCCATTGT
GACGGTGATGTGCTGCGCGGCGATTGGATTGGGATTATATGGGAACGATG
ATCTGCACAACGGACTGCTGGAGGTGCTGACGGCGGGCAGGAAGGTGGAC
AATCTAGTCACGACCATCCGCAATCAGACGCACATCTTGGAGAACACGCT
GACGAATCGCATACGGCCGCAGCTGGTGGAACTGGCGGACATCTTCGATC
AGCCGGTGTCGAACCAAACTGCCCTCTCCAAGCTCTTTGTGTCGCTCAAT
ATTGTCCAGGGAAATGTTACCCTAGCCACCAATGCGGCCAGCGATATCAG
ACGACCCCTGATGGGCATTTCCATGACGCACTTCCTCACGCGCGGCGACC
AATGGGAACTCATCCGCTGGCCGGGCACGGTGGCCACCTTGGCCCTGCTA
CTTGTCTTGTGTGCCGTGCTGCTGGTGGGCGTGGCCCGGCACTCGCGATG
CGCCCTAATCCTGTTCAGCGTGTGCGGCTTGCTAGCCGTCACCGGTTCGT
GGCTCATGTCCGGTCTGTATCTCTCCTCCTCGGTGGCTGTCGGCGATCTG
TGCATCTCACCAGCGGATTTTCTGGTGTCCACGGCACCCAGGGATCTGCC
CACGAATGTGCTGCTGCATTACACCCAATGCGAACCAGGCCACACGAATC
CGTTTACCCAACGCCTGAGGGAATCGCAGAATTCCCTAAACAATGCTCGC
AGTGCCATGGCCACGGTTATGAAGATATCGCTGGTGCTCTTCAAATCCTC
GGGGCTGCAGCCCAAGCTGGGTGCTGTAAATGCAGATCTGAATAGCAGTG
AGAGATTGCTGACCCAGCTGACGGCGCTCGTGGATTGCAAGGCAGTGCAT
CACAATTTTTTGGCCGCCGCCCGAGGACTTTGCGAGGGAGGATTATTGGG
ACTGGTACTGATGCTAATAGCCAGCTTCATTGCCGCCATTCTGCTAACCA
TCATGGTGTGGGTGGACTCGCACACGTGGATTTATATACGGAAACGGAAT
GACTATGCCCAGGTGGACGAGCCGTCGTATATTTCGCATCCGGCACCGCA
GAACCACCAGCAGATGATGAACGCCGCCAGGACATTGCCGCGAAATCATA
ATGGGCACTTCAGTCCGCCGGTGATCAGCGGCTCCCACACGCTCCAGCAT
CCCAGCAAGCGCCAGCAGCACGAGATGATGGCCCACGCCCACATCCAGCA
GAACATGCGCGCCATGGGCACCCACACGCTGGGCCGGCTGCCATCGCATA
ACCACAGCCCCACCCACATGACCGGTCCCAATAATGCAGCAGCAGTCGCA
GCAGCAGCAAACGCCGCCGCCAACATGCCGCCGACCACGCAGGCCGCCCA
ACAGCAACAGCAGCAGCAGGCGCAACAGCAACAGCAGCAGGCACAGCAAC
AGCTGGGAGGACCACAGCCCATCTACTGCCATCATCCCCACCAGCATCCG
CATCCCCATCCGCACCAGCATCCGCATTCGCACTCGGCTGCCGCCGTGGC
CGCTGCAGTGCAGCACCAGCATGCGATCTACCACCAACAGCAGGCGCAGC
AATATGGCACCTATACCACTGCGGCCCACCACGCACCGCATCATCTGGGG
CCGGGCCAGAGCCAGATCTACCAGCAGATTCCGGCGCACTTGGCGCCGCA
ACTGGCGGCCAATGGCAATCCCCACTCCATTTATCAGCCGCTAGTTGCTG
TTAGCCAGGGCTCCATATATGTATCCAATATGGCGACAATGCGTCGCCAG
AACAGTCAGGGCGGCCCACAGATACCGGCGCACCAGCATCCACCCAGCTT
GCATCAGCAACAGCAGCAACCACCGCCCCCCTCGCAGCAGCAGCAACAGC
TGCATCAGCTCAAGTCCCCGCAACAGCACCAGCAACAGCTGCAGCAGCAC
CAGCAGCAGCAGCAGCAGCAACACCACCAGCAGCAACATCACCAGCAGCA
ACACCAGCAGCAACAGCAGCAACACCATCAGCAGCAACAGCCAAACGAAT
CGGATGTCGTGCCCATTAGCACGGCCATGGATACCGCCATCTATGATCGG
GATAAGCAGATCTACAAGTGCTCCACTTTGCGGCAGGGCGGCAAGTTTGA
TCCCAAGTACAAGCCATCGATTCTCAACTGCCCACTGCCGGAGATCCCCA
AAGATGCGGAGCAGCCTAAGGTGGAGTCCATCTACGAGCAGCGTCAGCAG
GCCCACCACCAAAACTACTCCAAGACCCTGCAGCGTCCACCGATGATGTT
GCCGCCCCAGATGAAGGCGATTCCACCGCCGCGCATTGGTACGCCCACTT
CGCCGCCACCGCCCGTCGCCCAGCCGCTCAACGAGTCCAACGGAGGAGTG
CCGTCGGGTCTACAGAATGGAGGAGCTGTTGTGGGAGGAGGAGGAGCAAA
CGCCAACGAGGACACCTCGTTGCCGCCGCCGCCGCTGGAAGCGCAAACGG
AGGCGACAAAGGCCCGAATGGGAGCAGGACCGGCGGCCAATGGCAAGGTG
CTGCACAATGGCGGAGGCGGTGGAAGCGTGGGCGGTGGGGGCGGAGGAGC
GGTGGACGACGATGATGATCTGCCGCCGCCGCCGCCAGCGATAACCGACG
AAAGCAACTATGCGGTGACGGAGCTGTAAAAGCTTTCTAGACCAT
BS17603.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:13:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tty-RD | 2913 | CG1693-PD | 1..2913 | 17..2929 | 14565 | 100 | Plus |
| tty-RA | 2913 | CG1693-PA | 1..2913 | 17..2929 | 14565 | 100 | Plus |
| tty-RG | 2904 | CG1693-PG | 1..2904 | 17..2929 | 14395 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:13:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tty-RD | 7199 | CG1693-RD | 995..3907 | 17..2929 | 14565 | 100 | Plus |
| tty-RA | 3927 | CG1693-RA | 397..3309 | 17..2929 | 14565 | 100 | Plus |
| tty-RG | 3757 | CG1693-RG | 236..3139 | 17..2929 | 14395 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:13:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21333020..21333958 | 2524..1586 | 4695 | 100 | Minus |
| X | 23542271 | X | 21335166..21335931 | 1405..640 | 3830 | 100 | Minus |
| X | 23542271 | X | 21335995..21336482 | 640..153 | 2440 | 100 | Minus |
| X | 23542271 | X | 21331960..21332370 | 2929..2519 | 2040 | 99.8 | Minus |
| X | 23542271 | X | 21334870..21335042 | 1576..1404 | 865 | 100 | Minus |
| X | 23542271 | X | 21336775..21336912 | 154..17 | 690 | 100 | Minus |
| X | 23542271 | X | 10466597..10466689 | 2271..2179 | 195 | 80.6 | Minus |
Blast to na_te.dros performed 2014-11-28 02:13:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6926 | 2101..2302 | 509 | 74.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2343..2965 | 1649..2298 | 506 | 57.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2236..2513 | 2007..2293 | 503 | 67.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..3005 | 1587..2296 | 497 | 57.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6923 | 2082..2282 | 482 | 73.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2302..2494 | 2103..2295 | 452 | 70.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2319..2544 | 2047..2276 | 392 | 65.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6755..6952 | 2081..2284 | 385 | 67.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6764..6956 | 2066..2261 | 361 | 65.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6803..7026 | 2069..2295 | 299 | 60.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2747..2824 | 2218..2295 | 228 | 76.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6842..7060 | 2066..2287 | 219 | 58.5 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1105..1169 | 2101..2166 | 183 | 77.3 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1072..1163 | 2101..2195 | 171 | 66.3 | Plus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3224..3458 | 2041..2271 | 147 | 56.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1520..1602 | 2101..2181 | 139 | 67.9 | Plus |
BS17603.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:47:06 Download gff for
BS17603.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tty-RA | 338..3248 | 17..2927 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:09:00 Download gff for
BS17603.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tty-RA | 397..3307 | 17..2927 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:53:02 Download gff for
BS17603.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tty-RA | 338..3248 | 17..2927 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:06:41 Download gff for
BS17603.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tty-RA | 397..3307 | 17..2927 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:06:41 Download gff for
BS17603.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21336775..21336912 | 17..154 | 100 | | Minus |
| X | 21331962..21332365 | 2524..2927 | 100 | <- | Minus |
| X | 21333021..21333966 | 1575..2523 | 99 | <- | Minus |
| X | 21334872..21335041 | 1405..1574 | 100 | <- | Minus |
| X | 21335167..21335930 | 641..1404 | 100 | <- | Minus |
| X | 21335995..21336480 | 155..640 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:09:00 Download gff for
BS17603.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21202989..21203392 | 2524..2927 | 100 | <- | Minus |
| arm_X | 21204048..21204993 | 1575..2523 | 99 | <- | Minus |
| arm_X | 21205899..21206068 | 1405..1574 | 100 | <- | Minus |
| arm_X | 21206194..21206957 | 641..1404 | 100 | <- | Minus |
| arm_X | 21207022..21207507 | 155..640 | 100 | <- | Minus |
| arm_X | 21207802..21207939 | 17..154 | 100 | | Minus |
BS17603.3prime Sequence
845 bp (770 high quality bases) assembled on 2007-05-29
> BS17603.3prime
ATGGTCTAGAAAGCTTTTACAGCTCCGTCACCGCATAGTTGCTTTCGTCG
GTTATCGCTGGCGGCGGCGGCGGCAGATCATCATCGTCGTCCACCGCTCC
TCCGCCCCCACCGCCCACGCTTCCACCGCCTCCGCCATTGTGCAGCACCT
TGCCATTGGCCGCCGGTCCTGCTCCCATTCGGGCCTTTGTCGCCTCCGTT
TGCGCTTCCAGCGGCGGCGGCGGCAACGAGGTGTCCTCGTTGGCGTTTGC
TCCTCCTCCTCCCACAACAGCTCCTCCATTCTGTAGACCCGACGGCACTC
CTCCGTTGGACTCGTTGAGCGGCTGGGCGACGGGCGGTGGCGGCGAAGTG
GGCGTACCAATGCGCGGCGGTGGAATCGCCTTCATCTGGGGCGGCAACAT
CATCGGTGGACGCTGCAGGGTCTTGGAGTAGTTTTGGTGGTGGGCCTGCT
GACGCTGCTCGTAGATGGACTCCACCTTAGGCTGCTCCGCATCTTTGGGG
ATCTCCGGCAGTGGGCAGTTGAGAATCGATGGCTTGTACTTGGGATCAAA
CTTGCCGCCCTGCCGCAAAGTGGAGCACTTGTAGATCTGCTTATCCCGAT
CATAGATGGCGGTATCCATGGCCGTGCTAATGGGCACGACATCCGATTCG
TTTGGCTGTTGCTGCTGATGGTGTTGCTGCTGTTGCTGCTGGTGTTGCTG
CTGGTGATGTTGCTGCTGGTGGTGTTGCTGCTGCTGCTGCTGCTGGTGCT
GCTGCAGCTGTTGCTGGTGCTGTTGCGGGGACTTGAGCTGATGCAGCTGT
TGCTGCTGCTGCGAGGGGGGCGGTGGTTGCTGCTGTTGCTGATGC
BS17603.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:09:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1693-PA | 2913 | tty-RA | 2085..2913 | 845..17 | 4145 | 100 | Minus |
| CG1693-PB | 2511 | tty-RB | 2085..2508 | 845..422 | 2120 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:43:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tty-RF | 6642 | CG1693-RF | 2467..3295 | 845..17 | 4145 | 100 | Minus |
| tty-RE | 3853 | CG1693-RE | 2407..3235 | 845..17 | 4145 | 100 | Minus |
| tty-RD | 7199 | CG1693-RD | 3079..3907 | 845..17 | 4145 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:43:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21333020..21333443 | 422..845 | 2120 | 100 | Plus |
| X | 23542271 | X | 21331960..21332370 | 17..427 | 2040 | 99.8 | Plus |
| 2L | 23513712 | 2L | 13272691..13272815 | 776..655 | 215 | 80 | Minus |
| X | 23542271 | X | 10466597..10466689 | 675..767 | 195 | 80.6 | Plus |
Blast to na_te.dros performed 2015-02-12 23:43:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6926 | 845..644 | 509 | 74.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2513 | 844..653 | 494 | 74 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6923 | 845..664 | 476 | 74.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2302..2494 | 843..651 | 452 | 70.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2357..2546 | 845..653 | 427 | 69.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6952 | 844..662 | 379 | 69.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2372..2544 | 845..670 | 369 | 68.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2378..2539 | 845..681 | 368 | 70.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2813..3005 | 845..650 | 343 | 64.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2783..2965 | 845..648 | 336 | 66.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6835..7026 | 845..651 | 283 | 62.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6811..6996 | 845..657 | 281 | 64.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2747..2824 | 728..651 | 228 | 76.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6877..7060 | 845..659 | 207 | 59 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1105..1169 | 845..780 | 183 | 77.3 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1072..1163 | 845..751 | 171 | 66.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1520..1602 | 845..765 | 139 | 67.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6983..7170 | 838..655 | 128 | 56.5 | Minus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7955..8027 | 844..772 | 113 | 61.6 | Minus |
| TART-C | 11124 | TART-C TARTC 11124bp | 9399..9471 | 844..772 | 113 | 61.6 | Minus |
BS17603.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:09:12 Download gff for
BS17603.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1693-PA | 2085..2913 | 17..845 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:21:14 Download gff for
BS17603.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tty-RD | 3079..3917 | 8..845 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:22:39 Download gff for
BS17603.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tty-RD | 3079..3917 | 8..845 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:22:39 Download gff for
BS17603.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21331950..21332365 | 8..422 | 99 | <- | Plus |
| X | 21333021..21333443 | 423..845 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:21:14 Download gff for
BS17603.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21202977..21203392 | 8..422 | 99 | <- | Plus |
| arm_X | 21204048..21204470 | 423..845 | 100 | | Plus |
BS17603.5prime Sequence
856 bp (755 high quality bases) assembled on 2007-05-29
> BS17603.5prime
GAAGTTATCAGTCGACATGGGCGACTATCACGAGTTCACGGACCAGTACA
AGGTGCCGGTGATAGCGAAGCTACTCCACGCCCTGCCCCACTATAACATC
ACGTTCCACAAGATCAACAGCACGTTCCGGCCCAACGATGAGATCTACCT
GGAGAGCCTGGGCATTCTGGGCTCGGTTCCGGCTGCCCTGCTGATCGTCT
CGCTGCTGGGACTGCTCTTCTATCTCATGACCCGCTGCTGTGACCGGAAG
CCCCGGCCAGCCCACTCGATCACTAGCCTGAAGGTGGCCCTGTCCATTGT
GACGGTGATGTGCTGCGCGGCGATTGGATTGGGATTATATGGGAACGATG
ATCTGCACAACGGACTGCTGGAGGTGCTGACGGCGGGCAGGAAGGTGGAC
AATCTAGTCACGACCATCCGCAATCAGACGCACATCTTGGAGAACACGCT
GACGAATCGCATACGGCCGCAGCTGGTGGAACTGGCGGACATCTTCGATC
AGCCGGTGTCGAACCAAACTGCCCTCTCCAAGCTCTTTGTGTCGCTCAAT
ATTGTCCAGGGAAATGTTACCCTAGCCACCAATGCGGCCAGCGATATCAG
ACGACCCCTGATGGGCATTTCCATGACGCACTTCCTCACGCGCGGCGACC
AATGGGAACTCATCCGCTGGCCGGGCACGGTGGCCACCTTGGCCCTGCTA
CTTGTCTTGTGTGCCGTGCTGCTGGTGGGCGTGGCCCGGCACTCGCGATG
CGCCCTAATCCTGTTCAGCGTGTGCGGCTTGCTAGCCGTCACCGGTTCGT
GGCTCATGTCCGGTCTGTATCTCTCCTCTTCGGTGGCTGTCGGCGATCTG
TGCATC
BS17603.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:09:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1693-PA | 2913 | tty-RA | 1..840 | 17..856 | 4175 | 99.8 | Plus |
| CG1693-PB | 2511 | tty-RB | 1..840 | 17..856 | 4175 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:58:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tty-RF | 6642 | CG1693-RF | 395..1234 | 17..856 | 4185 | 99.9 | Plus |
| tty-RE | 3853 | CG1693-RE | 335..1174 | 17..856 | 4185 | 99.9 | Plus |
| tty-RD | 7199 | CG1693-RD | 995..1834 | 17..856 | 4185 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:58:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21335995..21336482 | 640..153 | 2440 | 100 | Minus |
| X | 23542271 | X | 21335715..21335931 | 856..640 | 1070 | 99.5 | Minus |
| X | 23542271 | X | 21336775..21336912 | 154..17 | 690 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 06:58:53 has no hits.
BS17603.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:09:16 Download gff for
BS17603.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1693-PB | 1..840 | 17..856 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:13:46 Download gff for
BS17603.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tty-RD | 986..1834 | 9..856 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:31:09 Download gff for
BS17603.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tty-RD | 986..1834 | 9..856 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:31:09 Download gff for
BS17603.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21335715..21335930 | 641..856 | 99 | <- | Minus |
| X | 21335995..21336480 | 155..640 | 100 | <- | Minus |
| X | 21336775..21336916 | 9..154 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:13:46 Download gff for
BS17603.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21206742..21206957 | 641..856 | 99 | <- | Minus |
| arm_X | 21207022..21207507 | 155..640 | 100 | <- | Minus |
| arm_X | 21207802..21207943 | 9..154 | 97 | | Minus |
BS17603.pep Sequence
Translation from 16 to 2928
> BS17603.pep
MGDYHEFTDQYKVPVIAKLLHALPHYNITFHKINSTFRPNDEIYLESLGI
LGSVPAALLIVSLLGLLFYLMTRCCDRKPRPAHSITSLKVALSIVTVMCC
AAIGLGLYGNDDLHNGLLEVLTAGRKVDNLVTTIRNQTHILENTLTNRIR
PQLVELADIFDQPVSNQTALSKLFVSLNIVQGNVTLATNAASDIRRPLMG
ISMTHFLTRGDQWELIRWPGTVATLALLLVLCAVLLVGVARHSRCALILF
SVCGLLAVTGSWLMSGLYLSSSVAVGDLCISPADFLVSTAPRDLPTNVLL
HYTQCEPGHTNPFTQRLRESQNSLNNARSAMATVMKISLVLFKSSGLQPK
LGAVNADLNSSERLLTQLTALVDCKAVHHNFLAAARGLCEGGLLGLVLML
IASFIAAILLTIMVWVDSHTWIYIRKRNDYAQVDEPSYISHPAPQNHQQM
MNAARTLPRNHNGHFSPPVISGSHTLQHPSKRQQHEMMAHAHIQQNMRAM
GTHTLGRLPSHNHSPTHMTGPNNAAAVAAAANAAANMPPTTQAAQQQQQQ
QAQQQQQQAQQQLGGPQPIYCHHPHQHPHPHPHQHPHSHSAAAVAAAVQH
QHAIYHQQQAQQYGTYTTAAHHAPHHLGPGQSQIYQQIPAHLAPQLAANG
NPHSIYQPLVAVSQGSIYVSNMATMRRQNSQGGPQIPAHQHPPSLHQQQQ
QPPPPSQQQQQLHQLKSPQQHQQQLQQHQQQQQQQHHQQQHHQQQHQQQQ
QQHHQQQQPNESDVVPISTAMDTAIYDRDKQIYKCSTLRQGGKFDPKYKP
SILNCPLPEIPKDAEQPKVESIYEQRQQAHHQNYSKTLQRPPMMLPPQMK
AIPPPRIGTPTSPPPPVAQPLNESNGGVPSGLQNGGAVVGGGGANANEDT
SLPPPPLEAQTEATKARMGAGPAANGKVLHNGGGGGSVGGGGGGAVDDDD
DLPPPPPAITDESNYAVTEL*
BS17603.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:49:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tty-PD | 970 | CG1693-PD | 1..970 | 1..970 | 5143 | 100 | Plus |
| tty-PA | 970 | CG1693-PA | 1..970 | 1..970 | 5143 | 100 | Plus |
| tty-PG | 967 | CG1693-PG | 1..967 | 1..970 | 5111 | 99.7 | Plus |
| tty-PF | 966 | CG1693-PF | 1..966 | 1..970 | 5103 | 99.6 | Plus |
| tty-PE | 966 | CG1693-PE | 1..966 | 1..970 | 5103 | 99.6 | Plus |
