Clone BS17606 Report

Search the DGRC for BS17606

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:176
Well:6
Vector:pDNR-Dual
Associated Gene/Transcriptena-RD
Protein status:BS17606.pep: full length peptide match
Sequenced Size:2096

Clone Sequence Records

BS17606.complete Sequence

2096 bp assembled on 2009-12-07

GenBank Submission: KX800375

> BS17606.complete
GAAGTTATCAGTCGACATGACTGAGCAGAGTATTATCGGGGCGCGGGCCT
CTGTGATGGTGTACGATGACAACCAGAAGAAGTGGGTGCCATCGGGCAGC
TCGTCGGGATTGAGCAAGGTGCAGATCTACCACCACCAGCAGAACAACAC
GTTCCGTGTGGTGGGACGAAAGCTGCAGGATCACGAGGTGGTCATCAACT
GCTCCATTCTGAAGGGACTGAAGTACAATCAGGCCACGGCAACATTTCAT
CAGTGGCGCGATTCGAAATTCGTTTACGGCTTGAACTTCTCGAGCCAAAA
TGATGCGGAGAACTTTGCTAGGGCCATGATGCATGCCCTGGAAGTGCTCA
GTGGTCGCGTGGCGAACAACCCAGGTGGACCGCCCACAAATGGCAATGGC
TATGAGGAGGACATGGGCTATCGCACGATGACCAGCGAGGATGCAGCCAT
ACTGCGTCAGAACAACAGCATAGGTGGGCACGTCACGCCCTCGGCCCAGA
CGCCCACCTCGCAGACCAACCAGAATAACATCCCCCAGAGCCCGCCGACG
CCCCAGGGTCATCATCGCACCAGCAGGAATTCCCTCAGCGCCCCACCGGC
ACCACAGCCCCAACAGCAGCAGCAGCAGCAGCAGGCGCAGCAAATGGGTC
AGCCAGGATCCCACTATGGACCCACTGGAAATGGACCCACTTCGAATGGC
CTGCCACAGCAGGTGAACTCACAGATTCCGCCGGCACCGCAGCAGCAGCC
ACAACAGCAACAGTTTCAGCAGCAGCAGCAGCAACAGCAATATCAGCAAA
TGGTCCAGGCGGGCTATGCGCCCTCTCAGTATCAGCAACCCCACTACGTG
CTCTCCAATTCTAATCCCAATCTAACTGTGCACCAATACCCGACACAGCA
GGCGCAGCAGCAGCCACCGCAAGCGCCACAGCCGCCGCTCCAGAACGGTG
GAATGTACATGGTGGGTCATGGTCATCTACCGAGCTCCGCGAGCGCCAAC
AGTGTTGTGTACGCCAGCCAGCAGCAGATGCTCCCGCAGGCGCATCCACA
GGCACCTCAGGCGCCGACGATGCCAGGTCCGGGCTACGGTGGTCCACCAG
TACCTCCGCCCCAGCAGCAGGCAGAGAATCCGTACGGTCAGGTACCCATG
CCGCCGCCAATGAATCCGTCACAGCAACAGCAGCCAGGTCAGGTGCCTCT
AAACCGGATGAGCAGCCAGGGTGGTCCAGGTGGCCCACCGGCTCCTGCTC
CGCCCCCGCCACCACCCAGTTTTGGTGGAGCTGCTGGAGGAGGACCACCA
CCACCAGCCCCGCCACAGATGTTCAACGGCGCACCGCCGCCGCCAGCCAT
GGGCGGTGGACCACCGCCGGCTCCACCGGCACCGCCAGCAATGGGTGGCG
GACCACCGCCAGCACCGGGCGGACCAGGGGCACCACCACCACCGCCTCCG
CCGCCGGGATTGGGAGGAGCGCCTAAGAAGGAAGATCCCCAGGCAGATCT
CATGGGCTCGCTGGCCTCCCAGCTGCAGCAGATCAAGCTCAAAAAGAATA
AGGTCACCACCTCTGCTCCGGAGAATAGCGGCAGCAGCACGTCCAGTGGC
GGCAGCGGCAACTATGGAACCATAGGACGAAGCTCTAATGGCATGGCCTC
CATGATGGACGAGATGGCCAAGACGCTGGCACGACGACGCGCCCAAGCAG
AAAAGAAGGATCCCGATCCTGAAGCCGAAGTGAAAAAACGCCCCTGGGAA
AAGTCCAATACACTGCCCCATAAGCTAAGCGGCGGAGCTGGCAGCGGATC
TGCTGGAAGTGGCCATGAAGGAGCGAATGGTAACTCGGGCGGTGCTGGTA
GCAACACAACGAACAGTGGCGGCGAGTCCCCGCGACCCATGCGCAAACGA
TTCGGTAGTGCCAGCGAAGAGACCATTCTCAAGGTCAATGGCGATGGCCT
GTCGCTGGCGCTTTCCAATGGCGACTTGGACACACTGAAGGCTGAGATTG
TGCGCGAAATGCGATTGGAGATTCAGAAAGTCAAGAACGAGATAATAGAT
GCTATCAAATCGGAGTTTAATCGCAGATAGAAGCTTTCTAGACCAT

BS17606.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:17:48
Subject Length Description Subject Range Query Range Score Percent Strand
ena-RD 2064 CG15112-PD 1..2064 17..2080 10320 100 Plus
ena-RB 2505 CG15112-PB 441..2505 22..2080 10165 99.7 Plus
ena-RE 2055 CG15112-PE 1..2055 17..2080 10040 99.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:17:50
Subject Length Description Subject Range Query Range Score Percent Strand
ena-RD 2878 CG15112-RD 406..2470 17..2081 10325 100 Plus
ena-RB 3669 CG15112-RB 695..2760 22..2081 10170 99.7 Plus
ena-RE 3446 CG15112-RE 482..2537 17..2081 10045 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:17:46
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19160177..19160904 827..1554 3640 100 Plus
2R 25286936 2R 19158734..19159057 22..345 1620 100 Plus
2R 25286936 2R 19159781..19160035 575..829 1275 100 Plus
2R 25286936 2R 19159120..19159353 344..577 1170 100 Plus
2R 25286936 2R 19161194..19161417 1712..1935 1120 100 Plus
2R 25286936 2R 19160972..19161132 1551..1711 805 100 Plus
2R 25286936 2R 19161474..19161593 1932..2051 600 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:17:47 has no hits.

BS17606.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:47:59 Download gff for BS17606.complete
Subject Subject Range Query Range Percent Splice Strand
ena-RD 393..2456 17..2080 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:10:52 Download gff for BS17606.complete
Subject Subject Range Query Range Percent Splice Strand
ena-RD 406..2469 17..2080 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:05:15 Download gff for BS17606.complete
Subject Subject Range Query Range Percent Splice Strand
ena-RD 393..2456 17..2080 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:08:22 Download gff for BS17606.complete
Subject Subject Range Query Range Percent Splice Strand
ena-RD 406..2469 17..2080 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:08:22 Download gff for BS17606.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19159783..19160035 577..829 100 -> Plus
2R 19159120..19159352 344..576 100 -> Plus
2R 19158728..19159055 17..343 99 -> Plus
2R 19160180..19160902 830..1552 100 -> Plus
2R 19160974..19161132 1553..1711 100 -> Plus
2R 19161194..19161415 1712..1933 100 -> Plus
2R 19161476..19161593 1934..2051 100 -> Plus
2R 19161660..19161688 2052..2080 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:10:52 Download gff for BS17606.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15046625..15046857 344..576 100 -> Plus
arm_2R 15046233..15046560 17..343 99 -> Plus
arm_2R 15047288..15047540 577..829 100 -> Plus
arm_2R 15047685..15048407 830..1552 100 -> Plus
arm_2R 15048479..15048637 1553..1711 100 -> Plus
arm_2R 15048699..15048920 1712..1933 100 -> Plus
arm_2R 15048981..15049098 1934..2051 100 -> Plus
arm_2R 15049165..15049193 2052..2080 100   Plus

BS17606.3prime Sequence

885 bp (807 high quality bases) assembled on 2007-05-29

> BS17606.3prime
ATGGTCTAGAAAGCTTCTATCTGCGATTAAACTCCGATTTGATAGCATCT
ATTATCTCGTTCTTGACTTTCTGAATCTCCAATCGCATTTCGCGCACAAT
CTCAGCCTTCAGTGTGTCCAAGTCGCCATTGGAAAGCGCCAGCGACAGGC
CATCGCCATTGACCTTGAGAATGGTCTCTTCGCTGGCACTACCGAATCGT
TTGCGCATGGGTCGCGGGGACTCGCCGCCACTGTTCGTTGTGTTGCTACC
AGCACCGCCCGAGTTACCATTCGCTCCTTCATGGCCACTTCCAGCAGATC
CGCTGCCAGCTCCGCCGCTTAGCTTATGGGGCAGTGTATTGGACTTTTCC
CAGGGGCGTTTTTTCACTTCGGCTTCAGGATCGGGATCCTTCTTTTCTGC
TTGGGCGCGTCGTCGTGCCAGCGTCTTGGCCATCTCGTCCATCATGGAGG
CCATGCCATTAGAGCTTCGTCCTATGGTTCCATAGTTGCCGCTGCCGCCA
CTGGACGTGCTGCTGCCGCTATTCTCCGGAGCAGAGGTGGTGACCTTATT
CTTTTTGAGCTTGATCTGCTGCAGCTGGGAGGCCAGCGAGCCCATGAGAT
CTGCCTGGGGATCTTCCTTCTTAGGCGCTCCTCCCAATCCCGGCGGCGGA
GGCGGTGGTGGTGGTGCCCCTGGTCCGCCCGGTGCTGGCGGTGGTCCGCC
ACCCATTGCTGGCGGTGCCGGTGGAGCCGGCGGTGGTCCACCGCCCATGG
CTGGCGGCGGCGGTGCGCCGTTGAACATCTGTGGCGGGGCTGGTGGTGGT
GGTCCTCCTCCAGCAGCTCCACAAAACTGGGTGGTGGCGGGAGCGGAGCA
GGAGCCGGTGGGCCACCTGGACCACCCTGGCTGCT

BS17606.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:09:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG15112-PB 2490 ena-RB 1685..2490 822..17 4030 100 Minus
CG15112-PA 2055 ena-RA 1250..2055 822..17 4030 100 Minus
CG15112-PC 2055 ena-RC 1250..2055 822..17 4030 100 Minus
CG15112-PD 2064 ena-RD 1259..2064 822..17 4030 100 Minus
CG15112-PE 2055 ena-RE 1250..2055 822..17 4030 100 Minus
CG15112-PB 2490 ena-RB 1621..1684 885..822 295 98.4 Minus
CG15112-PA 2055 ena-RA 1186..1249 885..822 295 98.4 Minus
CG15112-PC 2055 ena-RC 1186..1249 885..822 295 98.4 Minus
CG15112-PD 2064 ena-RD 1195..1258 885..822 295 98.4 Minus
CG15112-PE 2055 ena-RE 1186..1249 885..822 295 98.4 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:43:29
Subject Length Description Subject Range Query Range Score Percent Strand
ena-RG 4417 CG15112-RG 1531..2401 885..16 4315 99.8 Minus
ena-RF 4107 CG15112-RF 2328..3198 885..16 4315 99.8 Minus
ena-RE 3446 CG15112-RE 1667..2537 885..16 4315 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:43:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19160561..19160904 885..543 1655 99.4 Minus
2R 25286936 2R 19161194..19161417 385..162 1120 100 Minus
2R 25286936 2R 19160972..19161132 546..386 805 100 Minus
2R 25286936 2R 19161474..19161593 165..46 600 100 Minus
Blast to na_te.dros performed on 2015-02-12 23:43:27 has no hits.

BS17606.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:09:46 Download gff for BS17606.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15112-PA 1186..2055 17..885 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:21:16 Download gff for BS17606.3prime
Subject Subject Range Query Range Percent Splice Strand
ena-RE 1667..2537 16..885 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:22:43 Download gff for BS17606.3prime
Subject Subject Range Query Range Percent Splice Strand
ena-RE 1667..2537 16..885 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:22:43 Download gff for BS17606.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 19160974..19161132 386..544 100 -> Minus
2R 19161194..19161415 164..385 100 -> Minus
2R 19161476..19161593 46..163 100 -> Minus
2R 19161660..19161689 16..45 100   Minus
2R 19160561..19160902 545..885 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:21:16 Download gff for BS17606.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15048699..15048920 164..385 100 -> Minus
arm_2R 15048981..15049098 46..163 100 -> Minus
arm_2R 15049165..15049194 16..45 100   Minus
arm_2R 15048066..15048407 545..885 99 -> Minus
arm_2R 15048479..15048637 386..544 100 -> Minus

BS17606.5prime Sequence

905 bp (832 high quality bases) assembled on 2007-05-29

> BS17606.5prime
GAAGTTATCAGTCGACATGACTGAGCAGAGTATTATCGGGGCGCGGGCCT
CTGTGATGGTGTACGATGACAACCAGAAGAAGTGGGTGCCATCGGGCAGC
TCGTCGGGATTGAGCAAGGTGCAGATCTACCACCACCAGCAGAACAACAC
GTTCCGTGTGGTGGGACGAAAGCTGCAGGATCACGAGGTGGTCATCAACT
GCTCCATTCTGAAGGGACTGAAGTACAATCAGGCCACGGCAACATTTCAT
CAGTGGCGCGATTCGAAATTCGTTTACGGCTTGAACTTCTCGAGCCAAAA
TGATGCGGAGAACTTTGCTAGGGCCATGATGCATGCCCTGGAAGTGCTCA
GTGGTCGCGTGGCGAACAACCCAGGTGGACCGCCCACAAATGGCAATGGC
TATGAGGAGGACATGGGCTATCGCACGATGACCAGCGAGGATGCAGCCAT
ACTGCGTCAGAACAACAGCATAGGTGGGCACGTCACGCCCTCGGCCCAGA
CGCCCACCTCGCAGACCAACCAGAATAACATCCCCCAGAGCCCGCCGACG
CCCCAGGGTCATCATCGCACCAGCAGGAATTCCCTCAGCGCCCCACCGGC
ACCACAGCCCCAACAGCAGCAGCAGCAGCAGCAGGCGCAGCAAATGGGTC
AGCCAGGATCCCACTATGGACCCACTGGAAATGGACCCACTTCGAATGGC
CTGCCACAGCAGGTGAACTCACAGATTCCGCCGGCACCGCAGCAGCAGCC
ACAACAGCAACAGTTTCAGCAGCAGCAGCAGCAACAGCAATATCAGCAAA
TGGTCCAGGCGGGCTATGCGCCCTCTCAGTATCAGCAACCCCACTACGTG
CTCTCCAATTTCTATCCCAATCTAACTGTGCACCAATACCCGACACAGCA
GGCGC

BS17606.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:09:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG15112-PD 2064 ena-RD 1..844 17..860 4220 100 Plus
CG15112-PA 2055 ena-RA 1..560 17..576 2800 100 Plus
CG15112-PC 2055 ena-RC 1..560 17..576 2800 100 Plus
CG15112-PE 2055 ena-RE 1..560 17..576 2800 100 Plus
CG15112-PB 2490 ena-RB 441..995 22..576 2775 100 Plus
CG15112-PA 2055 ena-RA 558..801 586..829 1220 100 Plus
CG15112-PC 2055 ena-RC 558..801 586..829 1220 100 Plus
CG15112-PE 2055 ena-RE 558..801 586..829 1220 100 Plus
CG15112-PB 2490 ena-RB 993..1236 586..829 1220 100 Plus
CG15112-PD 2064 ena-RD 848..889 864..905 210 100 Plus
CG15112-PA 2055 ena-RA 839..880 864..905 210 100 Plus
CG15112-PC 2055 ena-RC 839..880 864..905 210 100 Plus
CG15112-PE 2055 ena-RE 839..880 864..905 210 100 Plus
CG15112-PB 2490 ena-RB 1274..1315 864..905 210 100 Plus
CG15112-PA 2055 ena-RA 802..835 827..860 170 100 Plus
CG15112-PC 2055 ena-RC 802..835 827..860 170 100 Plus
CG15112-PE 2055 ena-RE 802..835 827..860 170 100 Plus
CG15112-PB 2490 ena-RB 1237..1270 827..860 170 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:43:53
Subject Length Description Subject Range Query Range Score Percent Strand
ena-RD 2878 CG15112-RD 406..1294 17..905 4400 99.8 Plus
ena-RB 3669 CG15112-RB 695..1581 22..905 4335 99.4 Plus
ena-RE 3446 CG15112-RE 482..1361 17..905 4170 98.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:43:51
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19158734..19159057 22..345 1620 100 Plus
2R 25286936 2R 19159781..19160035 575..829 1275 100 Plus
2R 25286936 2R 19159120..19159353 344..577 1170 100 Plus
2R 25286936 2R 19160177..19160255 827..905 350 96.2 Plus
Blast to na_te.dros performed on 2015-02-13 06:43:52 has no hits.

BS17606.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:09:54 Download gff for BS17606.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15112-PD 1..889 17..905 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 00:02:32 Download gff for BS17606.5prime
Subject Subject Range Query Range Percent Splice Strand
ena-RD 406..1294 17..905 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:10:46 Download gff for BS17606.5prime
Subject Subject Range Query Range Percent Splice Strand
ena-RD 406..1294 17..905 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:10:46 Download gff for BS17606.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 19158734..19159055 22..343 100 -> Plus
2R 19159120..19159352 344..576 100 -> Plus
2R 19159783..19160035 577..829 100 -> Plus
2R 19160180..19160255 830..905 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 00:02:32 Download gff for BS17606.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15046625..15046857 344..576 100 -> Plus
arm_2R 15046239..15046560 22..343 100 -> Plus
arm_2R 15047288..15047540 577..829 100 -> Plus
arm_2R 15047685..15047760 830..905 97   Plus

BS17606.pep Sequence

Translation from 16 to 2079

> BS17606.pep
MTEQSIIGARASVMVYDDNQKKWVPSGSSSGLSKVQIYHHQQNNTFRVVG
RKLQDHEVVINCSILKGLKYNQATATFHQWRDSKFVYGLNFSSQNDAENF
ARAMMHALEVLSGRVANNPGGPPTNGNGYEEDMGYRTMTSEDAAILRQNN
SIGGHVTPSAQTPTSQTNQNNIPQSPPTPQGHHRTSRNSLSAPPAPQPQQ
QQQQQQAQQMGQPGSHYGPTGNGPTSNGLPQQVNSQIPPAPQQQPQQQQF
QQQQQQQQYQQMVQAGYAPSQYQQPHYVLSNSNPNLTVHQYPTQQAQQQP
PQAPQPPLQNGGMYMVGHGHLPSSASANSVVYASQQQMLPQAHPQAPQAP
TMPGPGYGGPPVPPPQQQAENPYGQVPMPPPMNPSQQQQPGQVPLNRMSS
QGGPGGPPAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPP
PAPPAPPAMGGGPPPAPGGPGAPPPPPPPPGLGGAPKKEDPQADLMGSLA
SQLQQIKLKKNKVTTSAPENSGSSTSSGGSGNYGTIGRSSNGMASMMDEM
AKTLARRRAQAEKKDPDPEAEVKKRPWEKSNTLPHKLSGGAGSGSAGSGH
EGANGNSGGAGSNTTNSGGESPRPMRKRFGSASEETILKVNGDGLSLALS
NGDLDTLKAEIVREMRLEIQKVKNEIIDAIKSEFNRR*

BS17606.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:18:48
Subject Length Description Subject Range Query Range Score Percent Strand
ena-PD 687 CG15112-PD 1..687 1..687 3694 100 Plus
ena-PB 834 CG15112-PB 146..834 1..687 3663 99.6 Plus
ena-PE 684 CG15112-PE 1..684 1..687 3648 99.3 Plus
ena-PC 684 CG15112-PC 1..684 1..687 3648 99.3 Plus
ena-PA 684 CG15112-PA 1..684 1..687 3648 99.3 Plus