Clone Sequence Records
BS17633.complete Sequence
2882 bp assembled on 2009-12-07
GenBank Submission: KX803977
> BS17633.complete
GAAGTTATCAGTCGACATGGCCGATGGAAATGGGCTGCCAGCGGGTGCAG
CTTCCGGCGGCATGGAAGCCGGGCAGACAGTGAATGGAGCGGGATCCGCC
AGCCCCACGCCCACCTCCAGCTCGGGGGCGGGGGCCAGTGGGAGTGCCAA
TCAAGGATATCATCAATTAAGCGTGACAATCGAGGAGGCTTCGCTGCGCA
ACAATGGCTTCCTCAAGCCAAATCCCTACGTGGAGCTCTTGATTGACAGC
AAAAGCAAGCGGAAAACGGACCTGGTGAAGAACAGCTATTTGCCCAAGTG
GAACGAGGAGTTCACAGTGCTGATTACACCCAATTCAACGCTGCACTTCA
AAGTGCTGGATCACTCCAGTTTCCGTAAAGATGCCATGCTTGGAGAGCGG
ATCATCAACCTGGCGCACATTCTGCAGCACTACAATGGGCGGTGCGAGTT
CCTTGAGCTGACCATCGACCTGTTCGTCACCAGCAAGTCGGACAATCGCC
AGACGAAGAGCGGCGAACTAGTGGCCATCCTCAATGGCCTCAAACTCGAT
ATGAGCAAGCTGCAGATTCAGCCAGTGGCTGGCCAACAGAATGGCAATCC
ACCCGTCCAGGCGGTCAATCCGTCGGTGGTCAGTGATGCGGCCGCCGGAC
GAAGTTGCATGATTTACGGTGGAGTACGGGCACGGATGCGACTACGCTCG
AGCAGTGGAAATAGCAACGGCGGAGAGACCCGCTCTCCTCTGCCGAATGG
AGGTGGAGATCACAGGAGATCTACGCAGGCGCCCCCGGTGTGGGAACAGC
AACAGCAGCAATCCCAGAATCAACAGCAGCCCCTGAGAATGGTCAATGGC
AGTGGGGCGGCCGTGCCGCAGACAGCTCCGTATCCTCAGCAGCCACCAGC
TCCCGCACTAGCTCGTCCTCTAACCCAAGTGTACGGAGCGCTGCCAGAGA
ATACACAACCAGCTGCTGTTTATTTGCCAGCTGGAGGAGGAGCAGCAGTA
GGACCACCTGGAGTAGCAGGCCCACCAATTGAACAGCCAGGAGTTGGACT
GCCCGTGAGCCAAAGCACAGATCCGCAACTGCAGACACAACCAGCGGATG
ATGAGCCGCTGCCTGCAGGGTGGGAAATCCGTCTGGACCAGTACGGTCGC
AGATACTACGTAGATCACAATACACGATCCACATACTGGGAGAAACCGAC
ACCGCTGCCCCCGGGCTGGGAGATCAGGAAGGATGGGCGCGGTCGAGTTT
ACTACGTAGACCACAACACAAGAAAAACTACCTGGCAGCGGCCGAACAGT
GAGCGTCTGATGCACTTCCAGCACTGGCAGGGTCAGCGGGCCCACGTCGT
GTCTCAAGGCAACCAGCGATACCTGTACTCCCAGCAGCAGCAGCAACCAA
CGGCGGTGACAGCCCAGGTGACGCAGGACGACGAGGATGCACTGGGTCCA
CTACCAGATGGCTGGGAGAAGAAGATCCAATCGGACAACAGAGTGTACTT
TGTTAACCACAAGAACCGAACCACCCAGTGGGAGGATCCACGCACGCAGG
GCCAGGAGGTGAGCTTGATCAACGAGGGCCCGCTTCCACCCGGCTGGGAA
ATCCGCTATACAGCCGCCGGTGAGCGCTTCTTCGTAGATCACAACACGAG
ACGAACCACCTTCGAAGATCCTCGACCCGGTGCTCCGAAGGGCGCCAAGG
GAGTGTACGGAGTGCCACGCGCCTACGAACGCAGCTTCCGCTGGAAGCTG
TCGCAGTTCCGGTACTTGTGCCAGAGCAACGCTTTGCCATCGCACATCAA
GATCACGGTGACGCGACAAACCCTGTTCGAGGATTCATACCACCAGATCA
TGCGTCTGCCAGCCTACGAACTGCGAAGGCGGCTCTATATCATATTCCGC
GGCGAGGAGGGACTGGATTATGGTGGTGTATCTCGCGAGTGGTTCTTCTT
GCTCTCCCACGAGGTTCTGAATCCCATGTACTGCTTGTTTGAGTACGCGA
ACAAGAACAACTACAGCCTGCAGATAAATCCCGCCTCGTACGTGAACCCC
GATCACCTGCAGTACTTCAAGTTCATCGGTCGCTTTATTGCGATGGCCCT
GTATCATGGAAGGTTTATCTACAGTGGATTCACAATGCCATTTTACAAGC
GCATGCTGAACAAGAAGTTGACCATCAAGGACATCGAAACGATCGATCCG
GAGTTCTACAACTCACTTATCTGGGTAAAAGATAACAACATCGATGAGTG
TGGATTGGAGCTCTGGTTTAGCGTGGACTTCGAAGTGCTCGGTCAGATAA
TCCATCATGAGTTGAAGGAGAACGGGGAAAAGGAGCGCGTCACGGAGGAG
AACAAGGAGGAGTACATCACCCTCATGACGGAGTGGCGGATGACACGTGG
CATTGAGCAGCAGACAAAGACGTTCCTGGAAGGCTTCAATGAGGTGGTGC
CCCTGGAATGGCTCAAGTACTTTGACGAGCGCGAGCTGGAGCTTATTCTG
TGCGGCATGCAGGACGTGGACGTGGAGGACTGGCAGCGCAACACCATCTA
CAGGCACTACAACCGCAACTCCAAGCAAGTTGTCTGGTTCTGGCAGTTTG
TTCGCGAGACGGATAACGAGAAGCGAGCTCGCCTGCTGCAGTTTGTGACG
GGCACGTGTCGCGTGCCGGTCGGAGGATTCGCCGAGCTGATGGGCTCCAA
CGGGCCGCAGCGCTTCTGCATCGAGAAGGTGGGCAAGGAGACGTGGCTGC
CGCGCTCGCACACCTGCTTCAATCGATTGGACCTGCCGCCGTACAAGAGC
TACGATCAGCTGGTGGAGAAGCTGACCTTTGCCATCGAGGAGACTGAGGG
CTTCTGCCAGGAATGAAAGCTTTCTAGACCAT
BS17633.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:01:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Su(dx)-RF | 2850 | CG4244-PF | 1..2850 | 17..2866 | 14250 | 100 | Plus |
Su(dx)-RE | 2850 | CG4244-PE | 1..2850 | 17..2866 | 14250 | 100 | Plus |
Su(dx)-RA | 2850 | CG4244-PA | 1..2850 | 17..2866 | 14250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:01:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Su(dx)-RF | 3701 | CG4244-RF | 358..3207 | 17..2866 | 14250 | 100 | Plus |
Su(dx)-RE | 3520 | CG4244-RE | 177..3026 | 17..2866 | 14250 | 100 | Plus |
Su(dx)-RA | 4612 | CG4244-RA | 574..3423 | 17..2866 | 14250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:01:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2040421..2041573 | 322..1474 | 5765 | 100 | Plus |
2L | 23513712 | 2L | 2041645..2042569 | 1473..2397 | 4625 | 100 | Plus |
2L | 23513712 | 2L | 2042911..2043183 | 2594..2866 | 1365 | 100 | Plus |
2L | 23513712 | 2L | 2042652..2042851 | 2397..2596 | 1000 | 100 | Plus |
2L | 23513712 | 2L | 2039992..2040154 | 17..179 | 815 | 100 | Plus |
2L | 23513712 | 2L | 2040217..2040359 | 180..322 | 715 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 02:01:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6778..7080 | 793..1110 | 145 | 55.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2378..2415 | 793..830 | 127 | 81.6 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1110..1142 | 798..830 | 120 | 84.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2336..2373 | 793..830 | 118 | 78.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2315..2554 | 793..1032 | 117 | 53.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6878 | 793..912 | 117 | 59.3 | Plus |
BS17633.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:44:41 Download gff for
BS17633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Su(dx)-RA | 268..3116 | 17..2865 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:04:03 Download gff for
BS17633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Su(dx)-RA | 574..3422 | 17..2865 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:05:57 Download gff for
BS17633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Su(dx)-RA | 268..3116 | 17..2865 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:02:21 Download gff for
BS17633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Su(dx)-RA | 574..3422 | 17..2865 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:02:21 Download gff for
BS17633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2039992..2040154 | 17..179 | 100 | -> | Plus |
2L | 2040217..2040359 | 180..322 | 100 | -> | Plus |
2L | 2040422..2041573 | 323..1474 | 100 | -> | Plus |
2L | 2041647..2042569 | 1475..2397 | 100 | -> | Plus |
2L | 2042653..2042851 | 2398..2596 | 100 | -> | Plus |
2L | 2042914..2043182 | 2597..2865 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:04:03 Download gff for
BS17633.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2039992..2040154 | 17..179 | 100 | -> | Plus |
arm_2L | 2040217..2040359 | 180..322 | 100 | -> | Plus |
arm_2L | 2040422..2041573 | 323..1474 | 100 | -> | Plus |
arm_2L | 2041647..2042569 | 1475..2397 | 100 | -> | Plus |
arm_2L | 2042653..2042851 | 2398..2596 | 100 | -> | Plus |
arm_2L | 2042914..2043182 | 2597..2865 | 100 | | Plus |
BS17633.3prime Sequence
893 bp (850 high quality bases) assembled on 2007-05-29
> BS17633.3prime
ATGGTCTAGAAAGCTTTCATTCCTGGCAGAAGCCCTCAGTCTCCTCGATG
GCAAAGGTCAGCTTCTCCACCAGCTGATCGTAGCTCTTGTACGGCGGCAG
GTCCAATCGATTGAAGCAGGTGTGCGAGCGCGGCAGCCACGTCTCCTTGC
CCACCTTCTCGATGCAGAAGCGCTGCGGCCCGTTGGAGCCCATCAGCTCG
GCGAATCCTCCGACCGGCACGCGACACGTGCCCGTCACAAACTGCAGCAG
GCGAGCTCGCTTCTCGTTATCCGTCTCGCGAACAAACTGCCAGAACCAGA
CAACTTGCTTGGAGTTGCGGTTGTAGTGCCTGTAGATGGTGTTGCGCTGC
CAGTCCTCCACGTCCACGTCCTGCATGCCGCACAGAATAAGCTCCAGCTC
GCGCTCGTCAAAGTACTTGAGCCATTCCAGGGGCACCACCTCATTGAAGC
CTTCCAGGAACGTCTTTGTCTGCTGCTCAATGCCACGTGTCATCCGCCAC
TCCGTCATGAGGGTGATGTACTCCTCCTTGTTCTCCTCCGTGACGCGCTC
CTTTTCCCCGTTCTCCTTCAACTCATGATGGATTATCTGACCGAGCACTT
CGAAGTCCACGCTAAACCAGAGCTCCAATCCACACTCATCGATGTTGTTA
TCTTTTACCCAGATAAGTGAGTTGTAGAACTCCGGATCGATCGTTTCGAT
GTCCTTGATGGTCAACTTCTTGTTCAGCATGCGCTTGTAAAATGGCATTG
TGAATCCACTGTAGATAAACCTTCCATGATACAGGGCCATCGCAATAAAG
CGACCGATGAACTTGAAGTACTGCAGGTGATCGGGGTTCACGTACGAGGC
GGGAATTATCTGCAGGCTGTAGTTGTTCTTGGTCGCGTACTCA
BS17633.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:13:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4244-PC | 2850 | Su(dx)-RC | 1974..2850 | 893..17 | 4335 | 99.7 | Minus |
CG4244-PB | 2850 | Su(dx)-RB | 1974..2850 | 893..17 | 4335 | 99.7 | Minus |
CG4244-PA | 2850 | Su(dx)-RA | 1974..2850 | 893..17 | 4335 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:06:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Su(dx)-RF | 3701 | CG4244-RF | 2331..3207 | 893..17 | 4355 | 99.8 | Minus |
Su(dx)-RE | 3520 | CG4244-RE | 2150..3026 | 893..17 | 4355 | 99.8 | Minus |
Su(dx)-RA | 4612 | CG4244-RA | 2547..3423 | 893..17 | 4355 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:06:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2042162..2042569 | 893..486 | 2010 | 99.5 | Minus |
2L | 23513712 | 2L | 2042911..2043183 | 289..17 | 1365 | 100 | Minus |
2L | 23513712 | 2L | 2042652..2042851 | 486..287 | 1000 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 07:06:18 has no hits.
BS17633.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:13:11 Download gff for
BS17633.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4244-PA | 1975..2850 | 17..892 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:13:59 Download gff for
BS17633.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Su(dx)-RA | 2548..3423 | 17..892 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:16:09 Download gff for
BS17633.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Su(dx)-RA | 2548..3423 | 17..892 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:16:09 Download gff for
BS17633.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2042914..2043183 | 17..286 | 100 | | Minus |
2L | 2042163..2042569 | 486..892 | 99 | -> | Minus |
2L | 2042653..2042851 | 287..485 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:13:59 Download gff for
BS17633.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2042163..2042569 | 486..892 | 99 | -> | Minus |
arm_2L | 2042653..2042851 | 287..485 | 100 | -> | Minus |
arm_2L | 2042914..2043183 | 17..286 | 100 | | Minus |
BS17633.5prime Sequence
911 bp (776 high quality bases) assembled on 2007-05-29
> BS17633.5prime
GAAGTTATCAGTCGACATGGCCGATGGAAATGGGCTGCCAGCGGGTGCAG
CTTCCGGCGGCATGGAAGCCGGGCAGACAGTGAATGGAGCGGGATCCGCC
AGCCCCACGCCCACCTCCAGCTCGGGGGCGGGGGCCAGTGGGAGTGCCAA
TCAAGGATATCATCAATTAAGCGTGACAATCGAGGAGGCTTCGCTGCGCA
ACAATGGCTTCCTCAAGCCAAATCCCTACGTGGAGCTCTTGATTGACAGC
AAAAGCAAGCGGAAAACGGACCTGGTGAAGAACAGCTATTTGCCCAAGTG
GAACGAGGAGTTCACAGTGCTGATTACACCCAATTCAACGCTGCACTTCA
AAGTGCTGGATCACTCCAGTTTCCGTAAAGATGCCATGCTTGGAGAGCGG
ATCATCAACCTGGCGCACATTCTGCAGCACTACAATGGGCGGTGCGAGTT
CCTTGAGCTGACCATCGACCTGTTCGTCACCAGCAAGTCGGACAATCGCC
AGACGAAGAGCGGCGAACTAGTGGCCATCCTCAATGGCCTCAAACTCGAT
ATGAGCAAGCTGCAGATTCAGCCAGTGGCTGGCCAACAGAATGGCAATCC
ACCCGTCCAGGCGGTCAATCCGTCGGTGGTCAGTGATGCGGCCGCCGGAC
GAAGTTGCATGATTTACGGTGGAGTACGGGCACGGATGCGACTACGCTCG
AGCAGTGGAAATAGCAACGGCGGAGAGACCCGCTCTCCTCTGCCGAATGG
AGGTGGAGATCACAGGAGATCTACGCAGGCGCCCCCGGTGTGGGAACAGC
AACAGCAGCAATCCCAGAATCAACAGCAGCCCCTGAGAATGGTCAATGGC
AGTGGGGGCGGCGTGCCGCAGACAGCTCCGTATCCTCAGCAGCCACCAGC
TCCCGCACTAG
BS17633.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:13:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4244-PC | 2850 | Su(dx)-RC | 1..841 | 17..857 | 4205 | 100 | Plus |
CG4244-PB | 2850 | Su(dx)-RB | 1..841 | 17..857 | 4205 | 100 | Plus |
CG4244-PA | 2850 | Su(dx)-RA | 1..841 | 17..857 | 4205 | 100 | Plus |
CG4244-PC | 2850 | Su(dx)-RC | 846..895 | 862..911 | 250 | 100 | Plus |
CG4244-PB | 2850 | Su(dx)-RB | 846..895 | 862..911 | 250 | 100 | Plus |
CG4244-PA | 2850 | Su(dx)-RA | 846..895 | 862..911 | 250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:42:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Su(dx)-RF | 3701 | CG4244-RF | 358..1252 | 17..911 | 4430 | 99.8 | Plus |
Su(dx)-RE | 3520 | CG4244-RE | 177..1071 | 17..911 | 4430 | 99.8 | Plus |
Su(dx)-RA | 4612 | CG4244-RA | 574..1468 | 17..911 | 4430 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:42:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2040421..2041010 | 322..911 | 2905 | 99.5 | Plus |
2L | 23513712 | 2L | 2039992..2040154 | 17..179 | 815 | 100 | Plus |
2L | 23513712 | 2L | 2040217..2040359 | 180..322 | 715 | 100 | Plus |
Blast to na_te.dros performed 2015-02-13 15:42:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6778..6891 | 793..907 | 131 | 60.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2378..2415 | 793..830 | 127 | 81.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6877 | 793..911 | 122 | 59 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1110..1142 | 798..830 | 120 | 84.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2336..2373 | 793..830 | 118 | 78.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6747..6855 | 795..907 | 113 | 61.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6768..6883 | 795..911 | 112 | 60.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2315..2352 | 793..830 | 109 | 76.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6761 | 793..830 | 109 | 76.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6773 | 793..830 | 109 | 76.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6799..6836 | 793..830 | 109 | 76.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2326..2361 | 795..830 | 108 | 77.8 | Plus |
BS17633.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:13:15 Download gff for
BS17633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4244-PA | 1..895 | 17..911 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 13:56:23 Download gff for
BS17633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Su(dx)-RA | 568..1468 | 9..911 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:10:36 Download gff for
BS17633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Su(dx)-RA | 568..1468 | 9..911 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:10:36 Download gff for
BS17633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2039986..2040154 | 9..179 | 97 | -> | Plus |
2L | 2040217..2040359 | 180..322 | 100 | -> | Plus |
2L | 2040422..2041010 | 323..911 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 13:56:23 Download gff for
BS17633.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2039986..2040154 | 9..179 | 97 | -> | Plus |
arm_2L | 2040217..2040359 | 180..322 | 100 | -> | Plus |
arm_2L | 2040422..2041010 | 323..911 | 99 | | Plus |
BS17633.pep Sequence
Translation from 16 to 2865
> BS17633.pep
MADGNGLPAGAASGGMEAGQTVNGAGSASPTPTSSSGAGASGSANQGYHQ
LSVTIEEASLRNNGFLKPNPYVELLIDSKSKRKTDLVKNSYLPKWNEEFT
VLITPNSTLHFKVLDHSSFRKDAMLGERIINLAHILQHYNGRCEFLELTI
DLFVTSKSDNRQTKSGELVAILNGLKLDMSKLQIQPVAGQQNGNPPVQAV
NPSVVSDAAAGRSCMIYGGVRARMRLRSSSGNSNGGETRSPLPNGGGDHR
RSTQAPPVWEQQQQQSQNQQQPLRMVNGSGAAVPQTAPYPQQPPAPALAR
PLTQVYGALPENTQPAAVYLPAGGGAAVGPPGVAGPPIEQPGVGLPVSQS
TDPQLQTQPADDEPLPAGWEIRLDQYGRRYYVDHNTRSTYWEKPTPLPPG
WEIRKDGRGRVYYVDHNTRKTTWQRPNSERLMHFQHWQGQRAHVVSQGNQ
RYLYSQQQQQPTAVTAQVTQDDEDALGPLPDGWEKKIQSDNRVYFVNHKN
RTTQWEDPRTQGQEVSLINEGPLPPGWEIRYTAAGERFFVDHNTRRTTFE
DPRPGAPKGAKGVYGVPRAYERSFRWKLSQFRYLCQSNALPSHIKITVTR
QTLFEDSYHQIMRLPAYELRRRLYIIFRGEEGLDYGGVSREWFFLLSHEV
LNPMYCLFEYANKNNYSLQINPASYVNPDHLQYFKFIGRFIAMALYHGRF
IYSGFTMPFYKRMLNKKLTIKDIETIDPEFYNSLIWVKDNNIDECGLELW
FSVDFEVLGQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQT
KTFLEGFNEVVPLEWLKYFDERELELILCGMQDVDVEDWQRNTIYRHYNR
NSKQVVWFWQFVRETDNEKRARLLQFVTGTCRVPVGGFAELMGSNGPQRF
CIEKVGKETWLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEETEGFCQE*
BS17633.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:36:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Su(dx)-PF | 949 | CG4244-PF | 1..949 | 1..949 | 5106 | 100 | Plus |
Su(dx)-PE | 949 | CG4244-PE | 1..949 | 1..949 | 5106 | 100 | Plus |
Su(dx)-PA | 949 | CG4244-PA | 1..949 | 1..949 | 5106 | 100 | Plus |
Su(dx)-PB | 949 | CG4244-PB | 1..949 | 1..949 | 5106 | 100 | Plus |
Su(dx)-PC | 949 | CG4244-PC | 1..949 | 1..949 | 5106 | 100 | Plus |