Clone BS17675 Report

Search the DGRC for BS17675

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:176
Well:75
Vector:pDNR-Dual
Associated Gene/TranscriptNaa60-RA
Protein status:BS17675.pep: full length peptide match
Sequenced Size:863

Clone Sequence Records

BS17675.complete Sequence

863 bp assembled on 2010-02-09

GenBank Submission: KX803517

> BS17675.complete
GAAGTTATCAGTCGACATGGCACAATTCACACTCTACAACAAACACAGTG
CGCCGCCCAGTAGCGAGAGTACGCGTGTGGACTGCGAACACGTACCGCTG
TGCTCGATTAACGATGTGCAGCTAAGGTTCCTGGTGCCCGACGATCTGAC
GGAGGTGCGACAGCTGTGCCAAGAATGGTTTCCAATCGACTATCCACTAT
CATGGTATGAGGATATTACCTCAAGCACGCGCTTCTTTGCGCTGGCAGCT
GTATATAATCTGGCCATAATTGGTTTAATCGTTGCCGAAATCAAACCCTA
TCGAAATGTGAACAAGGAGGTAATAGCCAATATGAGTGATAGTGATGAGT
TGTACACCAGGCTGAGCGGTTTTCCCATGCAGGACAAGGGCATCCTGCCG
GACTCGATGGGTCGTTCCGCCGATGTCGGTTATATACTGTCGCTGGGCGT
CCATCGTTCGCATCGACGCAATGGCATCGGATCGCTGCTGTTGGACGCGC
TAATGAACCACCTGACGACGGCCGAGCGGCATTCGGTGAAGGCGATCTTC
CTGCACACGCTGACCACCAATCAACCTGCCATATTTTTCTACGAGAAGAG
AAGATTTACGCTTCACTCATTCCTGCCCTACTACTACAATATACGGGGCA
AGGGCAAGGACGGATTCACCTATGTGAACTACATTAACGGCGGCCATCCA
CCCTGGACTTTATTAGATCACATCAAGCACTACGCGTCGATGGTGCGCCA
CACCAGCAGCCTTTGCGCCTGGCTGGCCGGACGAGTCCAGCAGGTGGTGC
GGTGGTTCTACCACAAGCTGCTCACTCGCTTCAACTTTATCGAGTGAAAG
CTTTCTAGACCAT

BS17675.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:08:11
Subject Length Description Subject Range Query Range Score Percent Strand
Naa60-RA 831 CG18177-PA 1..831 17..847 4155 100 Plus
Naa60-RB 768 CG18177-PB 302..768 381..847 2335 100 Plus
Naa60-RC 720 CG18177-PC 302..640 381..719 1680 99.7 Plus
Naa60-RB 768 CG18177-PB 1..304 17..320 1520 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:08:12
Subject Length Description Subject Range Query Range Score Percent Strand
Naa60-RA 2294 CG18177-RA 659..1490 17..848 4160 100 Plus
Naa60-RB 2231 CG18177-RB 960..1427 381..848 2340 100 Plus
Naa60-RC 1378 CG18177-RC 960..1298 381..719 1680 99.7 Plus
Naa60-RB 2231 CG18177-RB 659..962 17..320 1520 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:08:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9727983..9728433 153..603 2255 100 Plus
3L 28110227 3L 9728713..9728846 715..848 670 100 Plus
3L 28110227 3L 9727787..9727909 34..156 615 100 Plus
3L 28110227 3L 9728502..9728619 602..719 575 99.2 Plus
Blast to na_te.dros performed on 2014-11-28 03:08:10 has no hits.

BS17675.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:27:13 Download gff for BS17675.complete
Subject Subject Range Query Range Percent Splice Strand
CG18177-RA 1..831 17..847 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:15:31 Download gff for BS17675.complete
Subject Subject Range Query Range Percent Splice Strand
CG18177-RA 624..1453 17..846 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:16 Download gff for BS17675.complete
Subject Subject Range Query Range Percent Splice Strand
Naa60-RA 659..1488 17..846 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:27:13 Download gff for BS17675.complete
Subject Subject Range Query Range Percent Splice Strand
CG18177-RA 617..1458 9..852 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:39 Download gff for BS17675.complete
Subject Subject Range Query Range Percent Splice Strand
Naa60-RA 659..1488 17..846 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:39 Download gff for BS17675.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9727553..9727569 17..33 100 -> Plus
3L 9727787..9727907 34..154 100 -> Plus
3L 9727985..9728433 155..603 100 -> Plus
3L 9728504..9728616 604..716 99 -> Plus
3L 9728715..9728844 717..846 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:16 Download gff for BS17675.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9720653..9720669 17..33 100 -> Plus
arm_3L 9720887..9721007 34..154 100 -> Plus
arm_3L 9721085..9721533 155..603 100 -> Plus
arm_3L 9721604..9721716 604..716 99 -> Plus
arm_3L 9721815..9721944 717..846 100   Plus

BS17675.3prime Sequence

861 bp (825 high quality bases) assembled on 2007-05-29

> BS17675.3prime
ATGGTCTAGAAAGCTTTCACTCGATAAAGTTGAAGCGAGTGAGCAGCTTG
TGGTAGAACCACCGCACCACCTGCTGGACTCGTCCGGCCAGCCAGGCGCA
AAGGCTGCTGGTGTGGCGCACCATCGACGCGTAGTGCTTGATGTGATCTA
ATAAAGTCCAGGGTGGATGGCCGCCGTTAATGTAGTTCACATAGGTGAAT
CCGTCCTTGCCCTTGCCCCGTATATTGTAGTAGTAGGGCAGGAATGAGTG
AAGCGTAAATCTTCTCTTCTCGTAGAAAAATATGGCAGGTTGATTGGTGG
TCAGCGTGTGCAGGAAGATCGCCTTCACCGAATGCCGCTCGGCCGTCGTC
AGGTGGTTCATTAGCGCGTCCAACAGCAGCGATCCGATGCCATTGCGTCG
ATGCGAACGATGGACGCCCAGCGACAGTATATAACCGACATCGGCGGAAC
GACCCATCGAGTCCGGCAGGATGCCCTTGTCCTGCATGGGAAAACCGCTC
AGCCTGGTGTACAACTCATCACTATCACTCATATTGGCTATTACCTCCTT
GTTCACATTTCGATAGGGTTTGATTTCGGCAACGATTAAACCAATTATGG
CCAGATTATATACAGCTGCCAGCGCAAAGAAGCGCGTGCTTGAGGTAATA
TCCTCATACCATGATAGTGGATAGTCGATTGGAAACCATTCTTGGCACAG
CTGTCGCACCTCCGTCAGATCGTCGGGCACCAGGAACCTTAGCTGCACAT
CGTTAATCGAGCACAGCGGTACGTGTTCGCAGTCCACACGCGTACTCTCG
CTACTGGGCGGCGCACTGTGTTTGTTGTAGAGTGTGAATTGTGCCATGTC
GACTGATAACT

BS17675.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:18:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG18177-PA 831 CG18177-RA 1..831 847..17 4155 100 Minus
CG18177-PB 768 CG18177-RB 302..768 483..17 2335 100 Minus
CG18177-PB 768 CG18177-RB 1..304 847..544 1520 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:24:33
Subject Length Description Subject Range Query Range Score Percent Strand
Naa60-RA 2294 CG18177-RA 659..1490 847..16 4160 100 Minus
Naa60-RB 2231 CG18177-RB 960..1427 483..16 2340 100 Minus
Naa60-RC 1378 CG18177-RC 960..1298 483..145 1680 99.7 Minus
Naa60-RB 2231 CG18177-RB 659..962 847..544 1520 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:24:26
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9727983..9728433 711..261 2255 100 Minus
3L 28110227 3L 9728713..9728846 149..16 670 100 Minus
3L 28110227 3L 9727787..9727909 830..708 615 100 Minus
3L 28110227 3L 9728502..9728619 262..145 575 99.2 Minus
Blast to na_te.dros performed on 2015-02-10 17:24:29 has no hits.

BS17675.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:18:15 Download gff for BS17675.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18177-PA 1..831 17..847 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 16:39:44 Download gff for BS17675.3prime
Subject Subject Range Query Range Percent Splice Strand
Naa60-RA 652..1493 12..855 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:32:51 Download gff for BS17675.3prime
Subject Subject Range Query Range Percent Splice Strand
Naa60-RA 652..1493 12..855 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:32:51 Download gff for BS17675.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 9728715..9728849 12..147 98   Minus
3L 9727787..9727907 710..830 100 -> Minus
3L 9727985..9728433 261..709 100 -> Minus
3L 9728504..9728616 148..260 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 16:39:44 Download gff for BS17675.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9720887..9721007 710..830 100 -> Minus
arm_3L 9721085..9721533 261..709 100 -> Minus
arm_3L 9721604..9721716 148..260 99 -> Minus
arm_3L 9721815..9721949 12..147 98   Minus

BS17675.5prime Sequence

845 bp (780 high quality bases) assembled on 2007-05-29

> BS17675.5prime
GAAGTTATCAGTCGACATGGCACAATTCACACTCTACAACAAACACAGTG
CGCCGCCCAGTAGCGAGAGTACGCGTGTGGACTGCGAACACGTACCGCTG
TGCTCGATTAACGATGTGCAGCTAAGGTTCCTGGTGCCCGACGATCTGAC
GGAGGTGCGACAGCTGTGCCAAGAATGGTTTCCAATCGACTATCCACTAT
CATGGTATGAGGATATTACCTCAAGCACGCGCTTCTTTGCGCTGGCAGCT
GTATATAATCTGGCCATAATTGGTTTAATCGTTGCCGAAATCAAACCCTA
TCGAAATGTGAACAAGGAGGTAATAGCCAATATGAGTGATAGTGATGAGT
TGTACACCAGGCTGAGCGGTTTTCCCATGCAGGACAAGGGCATCCTGCCG
GACTCGATGGGTCGTTCCGCCGATGTCGGTTATATACTGTCGCTGGGCGT
CCATCGTTCGCATCGACGCAATGGCATCGGATCGCTGCTGTTGGACGCGC
TAATGAACCACCTGACGACGGCCGAGCGGCATTCGGTGAAGGCGATCTTC
CTGCACACGCTGACCACCAATCAACCTGCCATATTTTTCTACGAGAAGAG
AAGATTTACGCTTCACTCATTCCTGCCCTACTACTACAATATACGGGGCA
AGGGCAAGGACGGATTCACCTATGTGAACTACATTAACGGCGGCCATCCA
CCCTGGACTTTATTAGATCACATCAAGCACTACGCGTCGATGGTGCGCCA
CACCAGCAGCCTTTGCGCCTGGCTGGCCGGACGAGTCCAGCAGGTGGTGC
GGTGGTTCTACCACAAGCTGCTCACTCGCTTTCACTTTATCGAGT

BS17675.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:18:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG18177-PA 831 CG18177-RA 1..829 17..845 4095 99.7 Plus
CG18177-PB 768 CG18177-RB 302..766 381..845 2275 99.5 Plus
CG18177-PB 768 CG18177-RB 1..304 17..320 1520 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:57:44
Subject Length Description Subject Range Query Range Score Percent Strand
Naa60-RA 2294 CG18177-RA 659..1487 17..845 4115 99.8 Plus
Naa60-RB 2231 CG18177-RB 960..1424 381..845 2295 99.6 Plus
Naa60-RC 1378 CG18177-RC 960..1298 381..719 1680 99.7 Plus
Naa60-RB 2231 CG18177-RB 659..962 17..320 1520 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:57:37
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9727983..9728433 153..603 2255 100 Plus
3L 28110227 3L 9728713..9728843 715..845 625 98.5 Plus
3L 28110227 3L 9727787..9727909 34..156 615 100 Plus
3L 28110227 3L 9728502..9728619 602..719 575 99.2 Plus
Blast to na_te.dros performed on 2015-02-11 16:57:40 has no hits.

BS17675.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:18:20 Download gff for BS17675.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18177-PA 1..829 17..845 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 21:55:54 Download gff for BS17675.5prime
Subject Subject Range Query Range Percent Splice Strand
Naa60-RA 652..1487 9..845 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:01:34 Download gff for BS17675.5prime
Subject Subject Range Query Range Percent Splice Strand
Naa60-RA 652..1487 9..845 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:01:34 Download gff for BS17675.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 9727787..9727907 34..154 100 -> Plus
3L 9727985..9728433 155..603 100 -> Plus
3L 9728504..9728616 604..716 99 -> Plus
3L 9728715..9728843 717..845 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 21:55:54 Download gff for BS17675.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9720887..9721007 34..154 100 -> Plus
arm_3L 9721085..9721533 155..603 100 -> Plus
arm_3L 9721604..9721716 604..716 99 -> Plus
arm_3L 9721815..9721943 717..845 98   Plus

BS17675.pep Sequence

Translation from 16 to 846

> BS17675.pep
MAQFTLYNKHSAPPSSESTRVDCEHVPLCSINDVQLRFLVPDDLTEVRQL
CQEWFPIDYPLSWYEDITSSTRFFALAAVYNLAIIGLIVAEIKPYRNVNK
EVIANMSDSDELYTRLSGFPMQDKGILPDSMGRSADVGYILSLGVHRSHR
RNGIGSLLLDALMNHLTTAERHSVKAIFLHTLTTNQPAIFFYEKRRFTLH
SFLPYYYNIRGKGKDGFTYVNYINGGHPPWTLLDHIKHYASMVRHTSSLC
AWLAGRVQQVVRWFYHKLLTRFNFIE*

BS17675.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:03:29
Subject Length Description Subject Range Query Range Score Percent Strand
Naa60-PA 276 CG18177-PA 1..276 1..276 1476 100 Plus
Naa60-PB 255 CG18177-PB 1..255 1..276 1338 92.4 Plus
Naa60-PC 239 CG18177-PC 1..218 1..239 1102 89.1 Plus