Clone Sequence Records
BS17681.complete Sequence
437 bp assembled on 2010-02-09
GenBank Submission: KX802887
> BS17681.complete
GAAGTTATCAGTCGACATGTTCCGCTACATGCTCGTCGCCTCCGCCGTCC
TGGCCTGCGCCTACGGTGCCGCCACCTACAACCAGGAAGCTGGTGCCTAC
ATCACCAAGATCGGCTCCGACATCCAGCCCGAGGGCAACTACAACTACCA
GTACGAGACCAGCAACGGCATCGCCGCCCAGGAGTCCGGAATTGGTGGAA
ACCACGCCAACGGAGGCTTCTCGTGGTACTCGCCAGAGGGTGAGCTCGTC
CAGATCTCGTACGTGGCCGACGAGAACGGCTACCAGCCACAGGGAGCTCT
CCTGCCCACTCCTCCCCCAATCCCAGCTGCCATCCTTAGGAGCTTGGAGT
ACATCCGTACCCATCCCCAGTATGTCGAGCAGGAGTACCGCAGGCCCGCC
CTCAAGAAGGTCTTTGGTTAAAAGCTTTCTAGACCAT
BS17681.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:30:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr67Fa2-RA | 405 | CG18349-PA | 1..405 | 17..421 | 2025 | 100 | Plus |
| Cpr67Fa1-RA | 405 | CG7941-PA | 1..405 | 17..421 | 1815 | 96.5 | Plus |
| Lcp4-RB | 339 | CG2044-PB | 225..296 | 265..336 | 225 | 87.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:30:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr67Fa2-RA | 565 | CG18349-RA | 45..459 | 7..421 | 2030 | 99.3 | Plus |
| Cpr67Fa1-RA | 554 | CG7941-RA | 60..464 | 17..421 | 1815 | 96.5 | Plus |
| Lcp4-RB | 527 | CG2044-RB | 274..345 | 265..336 | 225 | 87.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:30:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10892014..10892410 | 25..421 | 1970 | 99.7 | Plus |
| 3L | 28110227 | 3L | 10890219..10890610 | 30..421 | 1765 | 96.7 | Plus |
| 2R | 25286936 | 2R | 8437977..8438048 | 265..336 | 225 | 87.5 | Plus |
| 2R | 25286936 | 2R | 8435769..8435840 | 265..336 | 210 | 86.1 | Plus |
| 3L | 28110227 | 3L | 7093638..7093706 | 302..370 | 180 | 84.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:30:07 has no hits.
BS17681.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:47 Download gff for
BS17681.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fa2-RA | 31..428 | 22..419 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:32 Download gff for
BS17681.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fa2-RA | 60..457 | 22..419 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:16:59 Download gff for
BS17681.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fa2-RA | 31..428 | 22..419 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:30:24 Download gff for
BS17681.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fa2-RA | 60..457 | 22..419 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:30:24 Download gff for
BS17681.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10892011..10892408 | 22..419 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:32 Download gff for
BS17681.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10885111..10885508 | 22..419 | 99 | | Plus |
BS17681.3prime Sequence
434 bp (434 high quality bases) assembled on 2007-05-29
> BS17681.3prime
ATGGTCTAGAAAGCTTTTAACCTTGACCTTCTTGAGGGCGGGCCTGCGGT
ACTCCTGCTCGACATACTGGGGATGGGTACGGATGTACTCCAAGCTCCTA
AGGATGGCAGCTGGGATTGGGGGAGGAGTGGGCAGGAGAGCTCCCTGTGG
CTGGTAGCCGTTCTCGTCGGCCACGTACGAGATCTGGACGAGCTCACCCT
CTGGCGAGTACCACGAGAAGCCTCCGTTGGCGTGGTTTCCACCAATTCCG
GACTCCTGGGCGGCGATGCCGTTGCTGGTCTCGTACTGGTAGTTGTAGTT
GCCCTCGGGCTGGATGTCGGAGCCGATCTTGGTGATGTAGGCACCAGCTT
CCTGGTTGTAGGTGGCGGCACCGTAGGCGCAGGCCAGGACGGCGGAGGCG
ACGAGCATGTAGCGGAACATGTCGACTGATAACT
BS17681.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:18:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18349-PA | 405 | CG18349-RA | 1..396 | 420..25 | 1980 | 100 | Minus |
| CG7941-PA | 405 | CG7941-RA | 1..396 | 420..25 | 1630 | 96.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:15:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr67Fa2-RA | 565 | CG18349-RA | 45..450 | 430..25 | 1985 | 99.3 | Minus |
| Cpr67Fa1-RA | 554 | CG7941-RA | 60..455 | 420..25 | 1770 | 96.5 | Minus |
| Lcp4-RB | 527 | CG2044-RB | 274..345 | 172..101 | 225 | 87.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:15:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10892014..10892401 | 412..25 | 1925 | 99.7 | Minus |
| 3L | 28110227 | 3L | 10890219..10890601 | 407..25 | 1720 | 96.6 | Minus |
| 2R | 25286936 | 2R | 8437977..8438048 | 172..101 | 225 | 87.5 | Minus |
| 2R | 25286936 | 2R | 8435769..8435840 | 172..101 | 210 | 86.1 | Minus |
| 3L | 28110227 | 3L | 7093638..7093706 | 135..67 | 180 | 84.1 | Minus |
Blast to na_te.dros performed on 2015-02-11 05:15:12 has no hits.
BS17681.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:18:54 Download gff for
BS17681.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18349-PA | 1..405 | 17..420 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 09:48:01 Download gff for
BS17681.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fa2-RA | 45..459 | 17..430 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:40:49 Download gff for
BS17681.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fa2-RA | 45..459 | 17..430 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:40:49 Download gff for
BS17681.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10892018..10892410 | 17..408 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 09:48:01 Download gff for
BS17681.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10885118..10885510 | 17..408 | 99 | | Minus |
BS17681.5prime Sequence
435 bp (435 high quality bases) assembled on 2007-05-29
> BS17681.5prime
GAAGTTATCAGTCGACATGTTCCGCTACATGCTCGTCGCCTCCGCCGTCC
TGGCCTGCGCCTACGGTGCCGCCACCTACAACCAGGAAGCTGGTGCCTAC
ATCACCAAGATCGGCTCCGACATCCAGCCCGAGGGCAACTACAACTACCA
GTACGAGACCAGCAACGGCATCGCCGCCCAGGAGTCCGGAATTGGTGGAA
ACCACGCCAACGGAGGCTTCTCGTGGTACTCGCCAGAGGGTGAGCTCGTC
CAGATCTCGTACGTGGCCGACGAGAACGGCTACCAGCCACAGGGAGCTCT
CCTGCCCACTCCTCCCCCAATCCCAGCTGCCATCCTTAGGAGCTTGGAGT
ACATCCGTACCCATCCCCAGTATGTCGAGCAGGAGTACCGCAGGCCCGCC
CTCAAGAAGGTCTTTGGTTAAAAGCTTTCTAGACC
BS17681.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:18:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18349-PA | 405 | CG18349-RA | 1..405 | 17..421 | 2025 | 100 | Plus |
| CG7941-PA | 405 | CG7941-RA | 1..405 | 17..421 | 1675 | 96.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:15:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr67Fa2-RA | 565 | CG18349-RA | 45..459 | 7..421 | 2030 | 99.3 | Plus |
| Cpr67Fa1-RA | 554 | CG7941-RA | 60..464 | 17..421 | 1815 | 96.5 | Plus |
| Lcp4-RB | 527 | CG2044-RB | 274..345 | 265..336 | 225 | 87.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:15:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10892014..10892410 | 25..421 | 1970 | 99.7 | Plus |
| 3L | 28110227 | 3L | 10890219..10890610 | 30..421 | 1765 | 96.7 | Plus |
| 2R | 25286936 | 2R | 8437977..8438048 | 265..336 | 225 | 87.5 | Plus |
| 2R | 25286936 | 2R | 8435769..8435840 | 265..336 | 210 | 86.1 | Plus |
| 3L | 28110227 | 3L | 7093638..7093706 | 302..370 | 180 | 84.1 | Plus |
Blast to na_te.dros performed on 2015-02-11 05:15:17 has no hits.
BS17681.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:18:59 Download gff for
BS17681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18349-PA | 1..405 | 17..421 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 09:48:04 Download gff for
BS17681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fa2-RA | 45..459 | 7..421 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:40:59 Download gff for
BS17681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fa2-RA | 45..459 | 7..421 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:40:59 Download gff for
BS17681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10892018..10892410 | 29..421 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 09:48:04 Download gff for
BS17681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10885118..10885510 | 29..421 | 100 | | Plus |
BS17681.pep Sequence
Translation from 371 to 437
> BS17681.pep
MSSRSTAGPPSRRSLVKSFLDH
Sequence BS17681.pep has no blast hits.
