Clone BS17714 Report

Search the DGRC for BS17714

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:177
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptCG12728-RA
Protein status:BS17714.pep: full length peptide match
Sequenced Size:1466

Clone Sequence Records

BS17714.complete Sequence

1466 bp assembled on 2009-12-07

GenBank Submission: KX805168

> BS17714.complete
GAAGTTATCAGTCGACATGCTATTGAAAGTAGTGAATATAAATGGCTTGC
AGCACCTGTTCGCCTGCACTGAGGGGCAGCATGATGAAACCCTAACTATT
CACGTTTTCCGTCCTCGCGAGAAGTGGACTTACTCCGAGACTTTGATGAA
ACGCGATTACCAGCAGCGTTTGAAAACGCTCAACGCGCGTGTGAAGTTTC
CCGAGGAATTGGTGCGCCAGGTCCTGCTCAACAAGGATCCATTGCATGTC
GAACAGGATTACCAGCACCCATTGAACGTCCTGAAACTGAAGTATGCCAT
GGCGAATTTCAAAGTTTTCCTCAAGTGGGAATGGCACCTGAGACCCATGG
ATGCCGCACAGTTGTATAGCCAAATGTTCTTGAACACAATGTCCACGGCT
TTGGGACTACGGGTTCAGATACCCCTTCTGCTAGGGATTATCCATGCCAA
GGACAAGGAGCTGAACCAGTATCGCACCGAGGGATGCCAGCTGCGCAAAG
TGACTGTGGAAACCAAGCCCTTTGATCTCGAGGCTTTTATGAATAAGCAC
AAGCAATTGCTGGACTGTTCCGCTGCCTACCAGAAGGCGCAGAGTACTTT
TTTTGCTGATAAGCCATCGCCTAATTGGACATCGCTTTCTTCGCCATGGG
CACGGGATGTCGCGCCCTATTCTTCGTCAAACGGCTACTTTGCTTCTTCG
AAGGCATCAAGCCCAAAAGAAGCTCCTCGCATTAGGAAGCGCAAGGCTCT
TGAAATCAATACCAATCATATGGAGCGCAAGGTAATGCAGCGCCGCTCCA
ATCCGCTTGTCGAGTACAAAAGCTCGCAGAGTTCCCAAGAGACAAACGTA
AATTTAATCTTAAAAGTAGAGCTAGCGCCAATGGACACCAAGAATGATCT
CACTGATGATGACGAAGAGTCATCCACATCTTCGGGGCTTTCCCAAGGAT
GGTCGGCCAAACTAACCAAATTTAATCCAACCGTCGGAAGTGGTGTATAT
GAACTTGCATCTCAGGAACAGTATGCTTCTTCTGAAGATGAGGATGCTTC
TTCTAAAAATGGGGATACTTCTTCTAAATATGAGGATGCTTCTTCTAAAG
ATGAGGATGCTTCTTCCAAAGATGAGAATACTTCTTCTAAAGATGAGGAT
GCTCCGTCTAAAGATGAGGATACTTCTTCTAAAGATGAGGATGCTTCTTC
TGAATATGAAGAGGTCACTAGGGAGGCATCGAACGCTTTCAATTTCGTCA
TAAAGAAGGTTGAATCTTTAAAAGAGTTTTACGATGCCCCAAGGGAACTC
ATCCAAGAACCCAAAGTCGGAAAGTCCGATCAGAATTGGGATTTAATTCT
TCGAACTGTGCTGGAAGATATCAAAGCCGTACTGATTTACTCAACTGAAC
GCATCGAAAAAGCGATCCAGAGCTATATCAATAAGTTAGCGCAAAAATAA
AAGCTTTCTAGACCAT

BS17714.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:45:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG12728-RB 1434 CG12728-PB 1..1434 17..1450 7170 100 Plus
CG12728-RA 1434 CG12728-PA 1..1434 17..1450 7170 100 Plus
CG32756-RB 1380 CG32756-PB 1..1175 17..1191 5325 97.2 Plus
CG12728-RB 1434 CG12728-PB 1010..1151 1068..1209 455 88 Plus
CG12728-RB 1434 CG12728-PB 1052..1193 1026..1167 455 88 Plus
CG12728-RA 1434 CG12728-PA 1010..1151 1068..1209 455 88 Plus
CG12728-RA 1434 CG12728-PA 1052..1193 1026..1167 455 88 Plus
CG12728-RB 1434 CG12728-PB 1007..1130 1086..1209 410 88.7 Plus
CG12728-RB 1434 CG12728-PB 1070..1193 1023..1146 410 88.7 Plus
CG12728-RA 1434 CG12728-PA 1007..1130 1086..1209 410 88.7 Plus
CG12728-RA 1434 CG12728-PA 1070..1193 1023..1146 410 88.7 Plus
CG12728-RB 1434 CG12728-PB 1007..1100 1107..1200 305 88.3 Plus
CG12728-RB 1434 CG12728-PB 1091..1184 1023..1116 305 88.3 Plus
CG12728-RA 1434 CG12728-PA 1007..1100 1107..1200 305 88.3 Plus
CG12728-RA 1434 CG12728-PA 1091..1184 1023..1116 305 88.3 Plus
CG12728-RB 1434 CG12728-PB 1010..1088 1131..1209 275 89.9 Plus
CG12728-RB 1434 CG12728-PB 1115..1193 1026..1104 275 89.9 Plus
CG12728-RA 1434 CG12728-PA 1010..1088 1131..1209 275 89.9 Plus
CG12728-RA 1434 CG12728-PA 1115..1193 1026..1104 275 89.9 Plus
CG12728-RB 1434 CG12728-PB 1007..1067 1149..1209 185 86.9 Plus
CG12728-RB 1434 CG12728-PB 1133..1193 1023..1083 185 86.9 Plus
CG12728-RA 1434 CG12728-PA 1007..1067 1149..1209 185 86.9 Plus
CG12728-RA 1434 CG12728-PA 1133..1193 1023..1083 185 86.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:45:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG12728-RB 2374 CG12728-RB 78..1511 17..1450 7170 100 Plus
CG12728-RA 1746 CG12728-RA 78..1511 17..1450 7170 100 Plus
CG32756-RB 2397 CG32756-RB 80..1254 17..1191 5325 97.2 Plus
CG12728-RB 2374 CG12728-RB 1087..1228 1068..1209 455 88 Plus
CG12728-RB 2374 CG12728-RB 1129..1270 1026..1167 455 88 Plus
CG12728-RA 1746 CG12728-RA 1087..1228 1068..1209 455 88 Plus
CG12728-RA 1746 CG12728-RA 1129..1270 1026..1167 455 88 Plus
CG12728-RB 2374 CG12728-RB 1084..1207 1086..1209 410 88.7 Plus
CG12728-RB 2374 CG12728-RB 1147..1270 1023..1146 410 88.7 Plus
CG12728-RA 1746 CG12728-RA 1084..1207 1086..1209 410 88.7 Plus
CG12728-RA 1746 CG12728-RA 1147..1270 1023..1146 410 88.7 Plus
CG12728-RB 2374 CG12728-RB 1084..1177 1107..1200 305 88.3 Plus
CG12728-RB 2374 CG12728-RB 1168..1261 1023..1116 305 88.3 Plus
CG12728-RA 1746 CG12728-RA 1084..1177 1107..1200 305 88.3 Plus
CG12728-RA 1746 CG12728-RA 1168..1261 1023..1116 305 88.3 Plus
CG12728-RB 2374 CG12728-RB 1087..1165 1131..1209 275 89.9 Plus
CG12728-RB 2374 CG12728-RB 1192..1270 1026..1104 275 89.9 Plus
CG12728-RA 1746 CG12728-RA 1087..1165 1131..1209 275 89.9 Plus
CG12728-RA 1746 CG12728-RA 1192..1270 1026..1104 275 89.9 Plus
CG12728-RB 2374 CG12728-RB 1084..1144 1149..1209 185 86.9 Plus
CG12728-RB 2374 CG12728-RB 1210..1270 1023..1083 185 86.9 Plus
CG12728-RA 1746 CG12728-RA 1084..1144 1149..1209 185 86.9 Plus
CG12728-RA 1746 CG12728-RA 1210..1270 1023..1083 185 86.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:45:45
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5943671..5944387 734..1450 3585 100 Plus
X 23542271 X 5946753..5947210 734..1191 1815 93.9 Plus
X 23542271 X 5943375..5943612 499..736 1190 100 Plus
X 23542271 X 5946457..5946694 499..736 1145 98.7 Plus
X 23542271 X 5945981..5946166 176..361 930 100 Plus
X 23542271 X 5942903..5943088 176..361 930 100 Plus
X 23542271 X 5942683..5942841 17..175 795 100 Plus
X 23542271 X 5945761..5945919 17..175 795 100 Plus
X 23542271 X 5943153..5943293 360..500 705 100 Plus
X 23542271 X 5946231..5946368 360..497 675 99.3 Plus
X 23542271 X 5943963..5944104 1068..1209 455 88 Plus
X 23542271 X 5944005..5944146 1026..1167 455 88 Plus
X 23542271 X 5947045..5947157 1086..1198 415 91.2 Plus
X 23542271 X 5943960..5944083 1086..1209 410 88.7 Plus
X 23542271 X 5944023..5944146 1023..1146 410 88.7 Plus
X 23542271 X 5947048..5947394 1068..1417 390 75 Plus
X 23542271 X 5947085..5947210 1021..1149 325 85.3 Plus
X 23542271 X 5947045..5947147 1107..1209 320 87.4 Plus
X 23542271 X 5943960..5944053 1107..1200 305 88.3 Plus
X 23542271 X 5944044..5944137 1023..1116 305 88.3 Plus
X 23542271 X 5947048..5947126 1131..1209 275 89.9 Plus
X 23542271 X 5943963..5944041 1131..1209 275 89.9 Plus
X 23542271 X 5944068..5944146 1026..1104 275 89.9 Plus
X 23542271 X 5943960..5944020 1149..1209 185 86.9 Plus
X 23542271 X 5944086..5944146 1023..1083 185 86.9 Plus
X 23542271 X 5947045..5947105 1149..1209 185 86.9 Plus
Blast to na_te.dros performed on 2014-11-28 01:45:47 has no hits.

BS17714.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:27:02 Download gff for BS17714.complete
Subject Subject Range Query Range Percent Splice Strand
CG12728-RA 1..1434 17..1450 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:39:20 Download gff for BS17714.complete
Subject Subject Range Query Range Percent Splice Strand
CG12728-RA 76..1501 17..1442 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:57:02 Download gff for BS17714.complete
Subject Subject Range Query Range Percent Splice Strand
CG12728-RA 78..1503 17..1442 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:27:02 Download gff for BS17714.complete
Subject Subject Range Query Range Percent Splice Strand
CG12728-RA 71..1509 12..1450 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:56:14 Download gff for BS17714.complete
Subject Subject Range Query Range Percent Splice Strand
CG12728-RA 78..1503 17..1442 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:56:14 Download gff for BS17714.complete
Subject Subject Range Query Range Percent Splice Strand
X 5942683..5942841 17..175 100 -> Plus
X 5942903..5943088 176..361 100 -> Plus
X 5943155..5943293 362..500 100 -> Plus
X 5943377..5943611 501..735 100 -> Plus
X 5943673..5944379 736..1442 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:57:02 Download gff for BS17714.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 5836936..5837121 176..361 100 -> Plus
arm_X 5837188..5837326 362..500 100 -> Plus
arm_X 5837410..5837644 501..735 100 -> Plus
arm_X 5836716..5836874 17..175 100 -> Plus
arm_X 5837706..5838412 736..1442 100   Plus

BS17714.3prime Sequence

886 bp (797 high quality bases) assembled on 2007-05-29

> BS17714.3prime
ATGGTCTAGAAAGCTTTTATTTTTGCGCTAACTTATTGATATAGCTCTGG
ATCGCTTTTTCGATGCGTTCAGTTGAGTAAATCAGTACGGCTTTGATATC
TTCCAGCACAGTTCGAAGAATTAAATCCCAATTCTGATCGGACTTTCCGA
CTTTGGGTTCTTGGATGAGTTCCCTTGGGGCATCGTAAAACTCTTTTAAA
GATTCAACCTTCTTTATGACGAAATTGAAAGCGTTCGATGCCTCCCTAGT
GACCTCTTCATATTCAGAAGAAGCATCCTCATCTTTAGAAGAAGTATCCT
CATCTTTAGACGGAGCATCCTCATCTTTAGAAGAAGTATTCTCATCTTTG
GAAGAAGCATCCTCATCTTTAGAAGAAGCATCCTCATATTTAGAAGAAGT
ATCCCCATTTTTAGAAGAAGCATCCTCATCTTCAGAAGAAGCATACTGTT
CCTGAGATGCAAGTTCATATACACCACTTCCGACGGTTGGATTAAATTTG
GTTAGTTTGGCCGACCATCCTTGGGAAAGCCCCGAAGATGTGGATGACTC
TTCGTCATCATCAGTGAGATCATTCTTGGTGTCCATTGGCGCTAGCTCTA
CTTTTAAGATTAAATTTACGTTTGTCTCTTGGGAACTCTGCGAGCTTTTG
TACTCGACAAGCGGATTGGAGCGGCGCTGCATTACCTTGCGCTCCATATG
ATTGGTATTGATTTCAAGAGCCTTGCGCTTCCTAATGCGAGGAGCTTCTT
TTGGGCTTGATGCCTTCGAAGAAGCAAAGTAGCCGTTTGACGAAGAATAG
GGCGCGACATCCCGTGCCCATGGCGAAGAAAGCGATGTCCAATTAGGCGA
TGGCTTATCAGCAAAAAAAGTACTTCTGCGCCTTCT

BS17714.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:23:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG12728-PA 1434 CG12728-RA 577..1434 874..17 4290 100 Minus
CG32756-PA 1380 CG32756-RA 577..938 874..513 1785 99.7 Minus
CG32756-PA 1380 CG32756-RA 947..1112 507..342 705 96.9 Minus
CG32756-PA 1380 CG32756-RA 1010..1118 381..273 320 91.7 Minus
CG32756-PA 1380 CG32756-RA 1013..1112 399..300 225 89 Minus
CG32756-PA 1380 CG32756-RA 1010..1118 423..315 220 88 Minus
CG32756-PA 1380 CG32756-RA 1031..1118 444..357 215 89.7 Minus
CG32756-PA 1380 CG32756-RA 1013..1083 336..266 205 91.5 Minus
CG32756-PA 1380 CG32756-RA 1120..1202 310..228 190 89.1 Minus
CG32756-PA 1380 CG32756-RA 1060..1104 310..266 175 95.5 Minus
CG32756-PA 1380 CG32756-RA 1302..1339 107..70 140 94.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:45:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG12728-RB 2374 CG12728-RB 643..1511 886..17 4325 99.9 Minus
CG12728-RA 1746 CG12728-RA 643..1511 886..17 4325 99.9 Minus
CG32756-RB 2397 CG32756-RB 645..1438 886..50 2655 88.7 Minus
CG12728-RB 2374 CG12728-RB 1087..1228 399..258 455 88 Minus
CG12728-RB 2374 CG12728-RB 1129..1270 441..300 455 88 Minus
CG12728-RA 1746 CG12728-RA 1087..1228 399..258 455 88 Minus
CG12728-RA 1746 CG12728-RA 1129..1270 441..300 455 88 Minus
CG12728-RB 2374 CG12728-RB 1084..1207 381..258 410 88.7 Minus
CG12728-RB 2374 CG12728-RB 1147..1270 444..321 410 88.7 Minus
CG12728-RA 1746 CG12728-RA 1147..1270 444..321 410 88.7 Minus
CG12728-RA 1746 CG12728-RA 1084..1207 381..258 410 88.7 Minus
CG12728-RB 2374 CG12728-RB 1084..1177 360..267 305 88.3 Minus
CG12728-RB 2374 CG12728-RB 1168..1261 444..351 305 88.3 Minus
CG12728-RA 1746 CG12728-RA 1084..1177 360..267 305 88.3 Minus
CG12728-RA 1746 CG12728-RA 1168..1261 444..351 305 88.3 Minus
CG12728-RB 2374 CG12728-RB 1087..1165 336..258 275 89.9 Minus
CG12728-RB 2374 CG12728-RB 1192..1270 441..363 275 89.9 Minus
CG12728-RA 1746 CG12728-RA 1087..1165 336..258 275 89.9 Minus
CG12728-RA 1746 CG12728-RA 1192..1270 441..363 275 89.9 Minus
CG12728-RB 2374 CG12728-RB 1084..1144 318..258 185 86.9 Minus
CG12728-RB 2374 CG12728-RB 1210..1270 444..384 185 86.9 Minus
CG12728-RA 1746 CG12728-RA 1084..1144 318..258 185 86.9 Minus
CG12728-RA 1746 CG12728-RA 1210..1270 444..384 185 86.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:45:31
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5943671..5944387 733..17 3585 100 Minus
X 23542271 X 5946753..5947210 733..276 1815 93.9 Minus
X 23542271 X 5943458..5943612 886..731 730 99.4 Minus
X 23542271 X 5946540..5946694 886..731 730 99.4 Minus
X 23542271 X 5943963..5944104 399..258 455 88 Minus
X 23542271 X 5944005..5944146 441..300 455 88 Minus
X 23542271 X 5947045..5947157 381..269 415 91.2 Minus
X 23542271 X 5943960..5944083 381..258 410 88.7 Minus
X 23542271 X 5944023..5944146 444..321 410 88.7 Minus
X 23542271 X 5947048..5947394 399..50 390 75 Minus
X 23542271 X 5947085..5947210 446..318 325 85.3 Minus
X 23542271 X 5947045..5947147 360..258 320 87.4 Minus
X 23542271 X 5943960..5944053 360..267 305 88.3 Minus
X 23542271 X 5944044..5944137 444..351 305 88.3 Minus
X 23542271 X 5943963..5944041 336..258 275 89.9 Minus
X 23542271 X 5944068..5944146 441..363 275 89.9 Minus
X 23542271 X 5947048..5947126 336..258 275 89.9 Minus
X 23542271 X 5943960..5944020 318..258 185 86.9 Minus
X 23542271 X 5944086..5944146 444..384 185 86.9 Minus
X 23542271 X 5947045..5947105 318..258 185 86.9 Minus
Blast to na_te.dros performed 2015-02-12 23:45:34
Subject Length Description Subject Range Query Range Score Percent Strand
invader1 4032 invader1 INVADER 4032bp 409..437 543..571 109 86.2 Plus

BS17714.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:23:40 Download gff for BS17714.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12728-PA 566..1434 17..886 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:21:35 Download gff for BS17714.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12728-RA 643..1514 10..886 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:23:14 Download gff for BS17714.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12728-RA 643..1514 10..886 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:23:14 Download gff for BS17714.3prime
Subject Subject Range Query Range Percent Splice Strand
X 5943458..5943611 732..886 99 -> Minus
X 5943673..5944390 10..731 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:21:35 Download gff for BS17714.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 5837491..5837644 732..886 99 -> Minus
arm_X 5837706..5838423 10..731 99   Minus

BS17714.5prime Sequence

827 bp (753 high quality bases) assembled on 2007-05-29

> BS17714.5prime
GAAGTTATCAGTCGACATGCTATTGAAAGTAGTGAATATAAATGGCTTGC
AGCACCTGTTCGCCTGCACTGAGGGGCAGCATGATGAAACCCTAACTATT
CACGTTTTCCGTCCTCGCGAGAAGTGGACTTACTCCGAGACTTTGATGAA
ACGCGATTACCAGCAGCGTTTGAAAACGCTCAACGCGCGTGTGAAGTTTC
CCGAGGAATTGGTGCGCCAGGTCCTGCTCAACAAGGATCCATTGCATGTC
GAACAGGATTACCAGCACCCATTGAACGTCCTGAAACTGAAGTATGCCAT
GGCGAATTTCAAAGTTTTCCTCAAGTGGGAATGGCACCTGAGACCCATGG
ATGCCGCACAGTTGTATAGCCAAATGTTCTTGAACACAATGTCCACGGCT
TTGGGACTACGGGTTCAGATACCCCTTCTGCTAGGGATTATCCATGCCAA
GGACAAGGAGCTGAACCAGTATCGCACCGAGGGATGCCAGCTGCGCAAAG
TGACTGTGGAAACCAAGCCCTTTGATCTCGAGGCTTTTATGAATAAGCAC
AAGCAATTGCTGGACTGTTCCGCTGCCTACCAGAAGGCGCAGAGTACTTT
TTTTGCTGATAAGCCATCGCCTAATTGGACATCGCTTTCTTCGCCATGGG
CACGGGATGTCGCGCCCTATTCTTCGTCAAACGGCTACTTTGCTTCTTCG
AAGGCATCAAGCCCAAAAGAAGCTCCTCGCATTANGAAGCGCAAGGCTCT
TGAAATCAATACCAATCATATGGAGCGCAAGGTAATGCAGCGCCGCTCCA
ATCCGCTTGTCGAGTACAAAAGCTCGC

BS17714.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:23:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG12728-PA 1434 CG12728-RA 1..811 17..827 4036 99.8 Plus
CG32756-PA 1380 CG32756-RA 1..811 17..827 3911 99.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:43:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG12728-RB 2374 CG12728-RB 78..888 17..827 4044 99.9 Plus
CG12728-RA 1746 CG12728-RA 78..888 17..827 4044 99.9 Plus
CG32756-RB 2397 CG32756-RB 80..890 17..827 3969 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:43:17
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5943375..5943610 499..734 1180 100 Plus
X 23542271 X 5946457..5946692 499..734 1135 98.7 Plus
X 23542271 X 5942903..5943088 176..361 930 100 Plus
X 23542271 X 5945981..5946166 176..361 930 100 Plus
X 23542271 X 5942683..5942841 17..175 795 100 Plus
X 23542271 X 5945761..5945919 17..175 795 100 Plus
X 23542271 X 5943153..5943293 360..500 705 100 Plus
X 23542271 X 5946231..5946368 360..497 675 99.3 Plus
X 23542271 X 5943673..5943764 736..827 460 100 Plus
X 23542271 X 5946755..5946846 736..827 460 100 Plus
Blast to na_te.dros performed on 2015-02-13 15:43:20 has no hits.

BS17714.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:23:45 Download gff for BS17714.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12728-PA 1..811 17..827 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 13:56:44 Download gff for BS17714.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12728-RA 73..888 12..827 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:16:40 Download gff for BS17714.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12728-RA 73..888 12..827 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:16:40 Download gff for BS17714.5prime
Subject Subject Range Query Range Percent Splice Strand
X 5942678..5942841 12..175 98 -> Plus
X 5942903..5943088 176..361 100 -> Plus
X 5943155..5943293 362..500 100 -> Plus
X 5943377..5943611 501..735 99 -> Plus
X 5943673..5943764 736..827 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 13:56:44 Download gff for BS17714.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 5836711..5836874 12..175 98 -> Plus
arm_X 5836936..5837121 176..361 100 -> Plus
arm_X 5837188..5837326 362..500 100 -> Plus
arm_X 5837410..5837644 501..735 99 -> Plus
arm_X 5837706..5837797 736..827 100   Plus

BS17714.pep Sequence

Translation from 16 to 1449

> BS17714.pep
MLLKVVNINGLQHLFACTEGQHDETLTIHVFRPREKWTYSETLMKRDYQQ
RLKTLNARVKFPEELVRQVLLNKDPLHVEQDYQHPLNVLKLKYAMANFKV
FLKWEWHLRPMDAAQLYSQMFLNTMSTALGLRVQIPLLLGIIHAKDKELN
QYRTEGCQLRKVTVETKPFDLEAFMNKHKQLLDCSAAYQKAQSTFFADKP
SPNWTSLSSPWARDVAPYSSSNGYFASSKASSPKEAPRIRKRKALEINTN
HMERKVMQRRSNPLVEYKSSQSSQETNVNLILKVELAPMDTKNDLTDDDE
ESSTSSGLSQGWSAKLTKFNPTVGSGVYELASQEQYASSEDEDASSKNGD
TSSKYEDASSKDEDASSKDENTSSKDEDAPSKDEDTSSKDEDASSEYEEV
TREASNAFNFVIKKVESLKEFYDAPRELIQEPKVGKSDQNWDLILRTVLE
DIKAVLIYSTERIEKAIQSYINKLAQK*

BS17714.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:55:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG12728-PB 477 CG12728-PB 1..477 1..477 2449 100 Plus
CG12728-PA 477 CG12728-PA 1..477 1..477 2449 100 Plus
CG32756-PB 459 CG32756-PB 1..459 1..473 2037 85.7 Plus
CG32756-PA 459 CG32756-PA 1..459 1..473 2037 85.7 Plus
CG14692-PE 2851 CG14692-PE 1136..1386 182..442 164 26.3 Plus