Clone Sequence Records
BS17734.complete Sequence
1055 bp assembled on 2010-02-09
GenBank Submission: KX803221
> BS17734.complete
GAAGTTATCAGTCGACATGAACCTCACAGAGCAAAACCCATATGGAAACG
GGCTGCTCTACGCAGCCTTCAATCAAGACCAAGGATGCTTCGCGTGCGCG
ACGGACACCGGATTCCGGGTCTACAACTGTGATCCGCTGAAGGAGAAGGA
GCGCCAATACTTTCCAGAGGGTGGTCTCAGCCATGTGGAGATGCTGTTTC
GTTGCAATTACTTAGCCCTGGTTGGAGGCGGCATCCGGCCGCTGTACCCG
CCCAACAAGGTGATCGTGTGGGATGACCTGAAGAAGTCCCCGGCCATATC
GCTGGACTTCAATCAGCCCGTGCGGGCGGTACGACTGCGTCGGGATCGCA
TCGTGGTCGTGTTGGAGGGCGTGATTAAGGTGTTCACCTTCACTCAGCAA
CCACAGCAGCTGCACGTCTTTGAGACCAGCTCAAATCCCAACGGGCTGTG
TGTGCTGTGCCCGCACAGCAATAAGAGCCTCCTCGCATTCCCCGGCCGTC
GAACTGGCCACGTTCAAATTGTTGATCTGGCCAACACAGAGCGGGCGCCG
CTTGAGGTGATCGCCCACGAGGCTGGTATCAGCTGTATTGCCCTTAATCT
GCAAGGCACGCGACTAGCCACCGCCGGGGAAAAGGGCACCCTCATCCGTA
TCTTCGATACGGAAAGTGGCAAGAAGGTATCAGAGCTGAGGCGCGGAAGC
AACCACGCCAACATATTCTGCATCAACTTTAACCACCAGTCCACAATGGT
GGTCGTCGCCTCCGATCATGGCACCATACACGTCTTCAACCTGGAGGACA
ACAAGCCCCGTGAATCCTCGCTGCCCATAATACCCAAGTATTTCTCGAGC
CAGTGGAGTTTTGTCAAGTTTTCAATACCCCAGGGACCTCGATGTGTATG
TGCCTTTGGCGCCGATCCTAATTCGGTTGTGGCCATTTGTGCAGACGGCC
ACTATTATAAATTCCTATTTAACAATAAAGGCGAGTGCAGTCGAGACATC
TGCACACAATTCCTTGAGCTGCAAGACGATGAGACCTAGAAGCTTTCTAG
ACCAT
BS17734.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:08:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11975-RB | 1023 | CG11975-PB | 1..1023 | 17..1039 | 5115 | 100 | Plus |
CG11975-RA | 1023 | CG11975-PA | 1..1023 | 17..1039 | 5115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:08:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11975-RB | 1733 | CG11975-RB | 132..1156 | 17..1041 | 5125 | 100 | Plus |
CG11975-RA | 1360 | CG11975-RA | 132..1156 | 17..1041 | 5125 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:08:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8993698..8994460 | 170..932 | 3815 | 100 | Plus |
3R | 32079331 | 3R | 8994526..8994635 | 932..1041 | 550 | 100 | Plus |
3R | 32079331 | 3R | 8993534..8993624 | 82..172 | 455 | 100 | Plus |
3R | 32079331 | 3R | 8993384..8993451 | 17..84 | 340 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 03:08:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 5793..5840 | 239..286 | 141 | 77.1 | Plus |
BS17734.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:27:06 Download gff for
BS17734.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11975-RA | 1..1023 | 17..1039 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:15:28 Download gff for
BS17734.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11975-RA | 128..1150 | 17..1039 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:11 Download gff for
BS17734.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11975-RA | 132..1154 | 17..1039 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:27:06 Download gff for
BS17734.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11975-RA | 122..1152 | 10..1041 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:35 Download gff for
BS17734.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11975-RA | 132..1154 | 17..1039 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:35 Download gff for
BS17734.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8993384..8993450 | 17..83 | 100 | -> | Plus |
3R | 8993536..8993622 | 84..170 | 100 | -> | Plus |
3R | 8993699..8994460 | 171..932 | 100 | -> | Plus |
3R | 8994527..8994633 | 933..1039 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:11 Download gff for
BS17734.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4819106..4819172 | 17..83 | 100 | -> | Plus |
arm_3R | 4819258..4819344 | 84..170 | 100 | -> | Plus |
arm_3R | 4819421..4820182 | 171..932 | 100 | -> | Plus |
arm_3R | 4820249..4820355 | 933..1039 | 100 | | Plus |
BS17734.3prime Sequence
901 bp (824 high quality bases) assembled on 2007-05-29
> BS17734.3prime
ATGGTCTAGAAAGCTTCTAGGTCTCATCGTCTTGCAGCTCAAGGAATTGT
GTGCAGATGTCTCGACTGCACTCGCCTTTATTGTTAAATAGGAATTTATA
ATAGTGGCCGTCTGCACAAATGGCCACAACCGAATTAGGATCGGCGCCAA
AGGCACATACACATCGAGGTCCCTGGGGTATTGAAAACTTGACAAAACTC
CACTGGCTCGAGAAATACTTGGGTATTATGGGCAGCGAGGATTCACGGGG
CTTGTTGTCCTCCAGGTTGAAGACGTGTATGGTGCCATGATCGGAGGCGA
CGACCACCATTGTGGACTGGTGGTTAAAGTTGATGCAGAATATGTTGGCG
TGGTTGCTTCCGCGCCTCAGCTCTGATACCTTCTTGCCACTTTCCGTATC
GAAGATACGGATGAGGGTGCCCTTTTCCCCGGCGGTGGCTAGTCGCGTGC
CTTGCAGATTAAGGGCAATACAGCTGATACCAGCCTCGTGGGCGATCACC
TCAAGCGGCGCCCGCTCTGTGTTGGCCAGATCAACAATTTGAACGTGGCC
AGTTCGACGGCCGGGGAATGCGAGGAGGCTCTTATTGCTGTGCGGGCACA
GCACACACAGCCCGTTGGGATTTGAGCTGGTCTCAAAGACGTGCAGCTGC
TGTGGTTGCTGAGTGAAGGTGAACACCTTAATCACGCCCTCCAACACGAC
CACGATGCGATCCCGACGCAGTCGTACCGCCCGCACGGGCTGATTGAAGT
CCAGCGATATGGCCGGGGACTTCTTCAGGTCATCCCACACGATCACCTTG
TTGGGCGGGTACAGCGGCCGGATGCCGCCTCAACCAGGGCTAAGTAATTG
CAACGAAACAGCATCTCCACATGGCTGAGACCACCCTCTGGAAAGTATTG
G
BS17734.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:26:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11975-PA | 1023 | CG11975-RA | 209..1023 | 831..17 | 4075 | 100 | Minus |
CG11975-PA | 1023 | CG11975-RA | 138..208 | 901..831 | 355 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:48:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11975-RB | 1733 | CG11975-RB | 269..1156 | 901..15 | 4415 | 99.9 | Minus |
CG11975-RA | 1360 | CG11975-RA | 269..1156 | 901..15 | 4415 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:48:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8993698..8994460 | 885..124 | 3765 | 99.9 | Minus |
3R | 32079331 | 3R | 8994526..8994635 | 124..15 | 550 | 100 | Minus |
Blast to na_te.dros performed 2015-02-13 13:48:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 5793..5840 | 817..770 | 141 | 77.1 | Minus |
BS17734.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:26:07 Download gff for
BS17734.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11975-PA | 138..1023 | 17..901 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 19:01:50 Download gff for
BS17734.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11975-RA | 269..1156 | 15..901 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:07:35 Download gff for
BS17734.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11975-RA | 269..1156 | 15..901 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:07:35 Download gff for
BS17734.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8993606..8993622 | 885..901 | 100 | -> | Minus |
3R | 8993699..8994460 | 124..884 | 99 | -> | Minus |
3R | 8994527..8994635 | 15..123 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 19:01:50 Download gff for
BS17734.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4819328..4819344 | 885..901 | 100 | -> | Minus |
arm_3R | 4819421..4820182 | 124..884 | 99 | -> | Minus |
arm_3R | 4820249..4820357 | 15..123 | 100 | | Minus |
BS17734.5prime Sequence
862 bp (796 high quality bases) assembled on 2007-05-29
> BS17734.5prime
GAAGTTATCAGTCGACATGAACCTCACAGAGCAAAACCCATATGGAAACG
GGCTGCTCTACGCAGCCTTCAATCAAGACCAAGGATGCTTCGCGTGCGCG
ACGGACACCGGATTCCGGGTCTACAACTGTGATCCGCTGAAGGAGAAGGA
GCGCCAATACTTTCCAGAGGGTGGTCTCAGCCATGTGGAGATGCTGTTTC
GTTGCAATTACTTAGCCCTGGTTGGAGGCGGCATCCGGCCGCTGTACCCG
CCCAACAAGGTGATCGTGTGGGATGACCTGAAGAAGTCCCCGGCCATATC
GCTGGACTTCAATCAGCCCGTGCGGGCGGTACGACTGCGTCGGGATCGCA
TCGTGGTCGTGTTGGAGGGCGTGATTAAGGTGTTCACCTTCACTCAGCAA
CCACAGCAGCTGCACGTCTTTGAGACCAGCTCAAATCCCAACGGGCTGTG
TGTGCTGTGCCCGCACAGCAATAAGAGCCTCCTCGCATTCCCCGGCCGTC
GAACTGGCCACGTTCAAATTGTTGATCTGGCCAACACAGAGCGGGCGCCG
CTTGAGGTGATCGCCCACGAGGCTGGTATCAGCTGTATTGCCCTTAATCT
GCAAGGCACGCGACTAGCCACCGCCGGGGAAAAGGGCACCCTCATCCGTA
TCTTCGATACGGAAAGTGGCAAGAAGGTATCAGAGCTGAGGCGCGGAAGC
AACCACGCCAACATATTCTGCATCAACTTTAACCACCAGTCCACAATGGT
GGTCGTCGCCTCCGATCATGGCACCATACACGTCTTCAACCTGGAGGACA
AACAGCCCCGTGAATCCTCGCTGCCCATAATACCCAAGTATTTCTCGAGC
CAGTGGAGTTTT
BS17734.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:26:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11975-PA | 1023 | CG11975-RA | 1..846 | 17..862 | 4180 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:57:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11975-RB | 1733 | CG11975-RB | 132..977 | 17..862 | 4200 | 99.8 | Plus |
CG11975-RA | 1360 | CG11975-RA | 132..977 | 17..862 | 4200 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:57:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8993698..8994390 | 170..862 | 3435 | 99.7 | Plus |
3R | 32079331 | 3R | 8993534..8993624 | 82..172 | 455 | 100 | Plus |
3R | 32079331 | 3R | 8993384..8993451 | 17..84 | 340 | 100 | Plus |
Blast to na_te.dros performed 2015-02-11 23:57:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 5793..5840 | 239..286 | 141 | 77.1 | Plus |
BS17734.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:26:12 Download gff for
BS17734.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11975-PA | 1..846 | 17..862 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 03:43:00 Download gff for
BS17734.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11975-RA | 126..977 | 10..862 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:59:19 Download gff for
BS17734.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11975-RA | 126..977 | 10..862 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:59:19 Download gff for
BS17734.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8993378..8993450 | 10..83 | 96 | -> | Plus |
3R | 8993536..8993622 | 84..170 | 100 | -> | Plus |
3R | 8993699..8994390 | 171..862 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 03:43:00 Download gff for
BS17734.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4819100..4819172 | 10..83 | 96 | -> | Plus |
arm_3R | 4819258..4819344 | 84..170 | 100 | -> | Plus |
arm_3R | 4819421..4820112 | 171..862 | 99 | | Plus |
BS17734.pep Sequence
Translation from 16 to 1038
> BS17734.pep
MNLTEQNPYGNGLLYAAFNQDQGCFACATDTGFRVYNCDPLKEKERQYFP
EGGLSHVEMLFRCNYLALVGGGIRPLYPPNKVIVWDDLKKSPAISLDFNQ
PVRAVRLRRDRIVVVLEGVIKVFTFTQQPQQLHVFETSSNPNGLCVLCPH
SNKSLLAFPGRRTGHVQIVDLANTERAPLEVIAHEAGISCIALNLQGTRL
ATAGEKGTLIRIFDTESGKKVSELRRGSNHANIFCINFNHQSTMVVVASD
HGTIHVFNLEDNKPRESSLPIIPKYFSSQWSFVKFSIPQGPRCVCAFGAD
PNSVVAICADGHYYKFLFNNKGECSRDICTQFLELQDDET*
BS17734.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:03:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11975-PB | 340 | CG11975-PB | 1..340 | 1..340 | 1816 | 100 | Plus |
CG11975-PA | 340 | CG11975-PA | 1..340 | 1..340 | 1816 | 100 | Plus |
Atg18a-PG | 377 | CG7986-PG | 2..286 | 1..285 | 291 | 29.8 | Plus |
Atg18a-PC | 377 | CG7986-PC | 2..286 | 1..285 | 291 | 29.8 | Plus |
Atg18a-PB | 377 | CG7986-PB | 2..286 | 1..285 | 291 | 29.8 | Plus |