Clone Sequence Records
BS17750.3prime Sequence
905 bp (833 high quality bases) assembled on 2007-05-29
> BS17750.3prime
ATGGTCTAGAAAGCTTTCACGTCTGGCGCTTCAAGAGTTTCTGAGCCTGC
AGGCTACTGCGCACGGCACCGCCGCGTTGGATCGAGTTATCCAGCAAATC
CCGCTGCAGACTCTGGCGGAGCGGGACATTCCTCTGGAGCAGGTGCGTGT
CGGAGGCAATGGACAGTGGCTCCTCATTGCTATTATCCGACTCATTGCCG
CCTGACTCGGAACCGATCACGAACTGGGAATTGGTACGGGCGTCATCTAC
CCAAGATCGACGGTTTCGACTGGGCACCTTGTTCATTAGATCCGAGCTAG
CCTTCTTCACTCTTCTAACCAGCATGCTGGCAAATGGTTTTTTCTTGTGC
ACTGTGGTTTCTGACTTCTTGTAATGCTCCATAATTTTCTCCTCCAGTTT
TTCCTTCTGCCGCTTGAGGCTGTGCACCCGTTCGGTGTAGTTCTTCTCCT
CCTCATGGAAGTGCTTTTTGTCCTCCAGGGATATGGCCAATAGTTCCTGA
TATTGAGAGAGCAATTGGGACACGTTGTCCATCAGAGCCTTGCGCTCCGA
GTCCAGTTCAGCATTGTTTTGTATCAACATCTCACAACGCTGCTGAACCT
TGCTATACTCCATCTGTAGGCAACGGACCTGATCGCTCTTAGCATTTAGC
TCGCCGGAGAGTTCTGTGTTTTGTAGCTTAAGGCTGGAGTGCTCCATGCG
TACCATCTTGTACTGCTCCTGGATGTTTTTGTATTCGTTCTTGAAGCGAT
CGCTGGTGGCGAACAGATTGCGGAAGTCGTCTGTCAGTTTGGAGTGCTCC
GTACGCANGATTGACAGATCCTCGCTGCATGTTTTCATGTTGCTGTTCTG
AATAGTCAACTCCTCAATGCGTTGCTCCAATGCCGACTGCTGTTCACGGG
TATCT
BS17750.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:28:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12734-PB | 3708 | CG12734-RB | 2820..3708 | 905..17 | 4426 | 99.8 | Minus |
| CG12734-PA | 4146 | CG12734-RA | 2820..3688 | 905..37 | 4326 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:19:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Girdin-RB | 5147 | CG12734-RB | 3243..4131 | 905..17 | 4434 | 99.9 | Minus |
| Girdin-RD | 5150 | CG12734-RD | 3243..4134 | 905..17 | 4394 | 99.6 | Minus |
| Girdin-RC | 5187 | CG12734-RC | 3243..4111 | 905..37 | 4334 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:19:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3182820..3183144 | 905..581 | 1614 | 99.7 | Minus |
| 3L | 28110227 | 3L | 3183198..3183438 | 582..342 | 1205 | 100 | Minus |
| 3L | 28110227 | 3L | 3183636..3183800 | 265..101 | 825 | 100 | Minus |
| 3L | 28110227 | 3L | 3183499..3183574 | 341..266 | 380 | 100 | Minus |
| 3L | 28110227 | 3L | 3183932..3183997 | 102..37 | 330 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 07:19:48 has no hits.
BS17750.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:28:32 Download gff for
BS17750.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12734-PB | 2820..3708 | 17..905 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:14:40 Download gff for
BS17750.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Girdin-RB | 3243..4131 | 17..905 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:45:47 Download gff for
BS17750.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Girdin-RB | 3243..4131 | 17..905 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:45:47 Download gff for
BS17750.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3184252..3184271 | 17..36 | 100 | | Minus |
| 3L | 3182820..3183144 | 581..905 | 99 | -> | Minus |
| 3L | 3183200..3183438 | 342..580 | 100 | -> | Minus |
| 3L | 3183499..3183574 | 266..341 | 100 | -> | Minus |
| 3L | 3183636..3183799 | 102..265 | 100 | -> | Minus |
| 3L | 3183933..3183997 | 37..101 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:14:40 Download gff for
BS17750.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3182820..3183144 | 581..905 | 99 | -> | Minus |
| arm_3L | 3183200..3183438 | 342..580 | 100 | -> | Minus |
| arm_3L | 3183499..3183574 | 266..341 | 100 | -> | Minus |
| arm_3L | 3183636..3183799 | 102..265 | 100 | -> | Minus |
| arm_3L | 3183933..3183997 | 37..101 | 100 | -> | Minus |
| arm_3L | 3184252..3184271 | 17..36 | 100 | | Minus |
BS17750.5prime Sequence
858 bp (752 high quality bases) assembled on 2007-05-29
> BS17750.5prime
GAAGTTATCAGTCGACATGGCTGGCACTGCGACCGCGACGCCAATGGAAA
TTGATGAGTTTGTTAATTCGTCCATAATTTCTTGGCTGGAATCATGTCTG
CCACGTGCCGAGCTTCTCGCCGGATACACCTCCCTGCTGGATGGCCACAT
AATTCACAGCGTCTGGCTGCAAATCGACCCCGAGCCGCAAAATAATCCCA
GCGAGCTGAACGATCTTAACGGGAAATCTCTCAGCATTGCGAGGGCCAAG
AACTTCGAGTGCGTCGTGAGGAATCTAAAGTCTTTCTTTGAGGAGGAGCT
TGGTCAAACCATACTGGTCCTACCCGATGCCTTCACCCTGGGTCATCATC
CGGAGAGTAAGAACGGGCTCGAACAGATGAAGACCTTGCTGACCCTGTTG
CTCGGCGCAGCTGTGCAATGTCCCAACAAGGAGCTATTTATTGCTCGCAT
CAAGGAGCTGGACTTAGAAACGCAACACGCTATTGTTGGACTGATCAAAC
AAGTGACCGACAGCCATAGTTTGGTGCTCACCGAGGACTCCTTGGAGCGA
CTTACGCCGCAGAGCATGTACACGCACATTTTGCGCCTGACCAAGGAGCG
GGACGTCATGTATCTCAAGTGGATCGATTTGGCGTGCGTAGAGACCGAAA
TGACAGCCAGCGATAATTTGGTGGAATGTGGCCAAGGTGTCAGCGTTACA
CGTTCCCCTTCGAACGGAACTGCCACCTCGACACCTTCATCTTCTTCCAA
TTCGGAAAGCAATCACCTTGCCGTAGAATGTGCCGATCTGCGTTCGAAGA
ACCGCAAGCTGCGTCAGGAACTCGAGGAAAAGTCCGAGAAATCTTTGGAG
CTACGTGA
BS17750.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:28:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12734-PA | 4146 | CG12734-RA | 1..824 | 17..840 | 4120 | 100 | Plus |
| CG12734-PB | 3708 | CG12734-RB | 1..824 | 17..840 | 4120 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:49:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Girdin-RE | 5085 | CG12734-RE | 424..1265 | 17..858 | 4165 | 99.8 | Plus |
| Girdin-RD | 5150 | CG12734-RD | 424..1265 | 17..858 | 4165 | 99.8 | Plus |
| Girdin-RC | 5187 | CG12734-RC | 424..1265 | 17..858 | 4165 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:49:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3179943..3180680 | 85..822 | 3690 | 100 | Plus |
| 3L | 28110227 | 3L | 3179353..3179421 | 17..85 | 345 | 100 | Plus |
Blast to na_te.dros performed 2015-02-13 13:49:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cr1a | 4470 | Cr1a DMCR1A 4470bp | 1422..1490 | 719..788 | 113 | 64.3 | Plus |
BS17750.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:28:37 Download gff for
BS17750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12734-PB | 1..841 | 17..857 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 19:01:57 Download gff for
BS17750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Girdin-RC | 418..1264 | 9..857 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:08:28 Download gff for
BS17750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Girdin-RC | 418..1264 | 9..857 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:08:28 Download gff for
BS17750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3179347..3179421 | 9..85 | 94 | -> | Plus |
| 3L | 3179944..3180680 | 86..822 | 100 | -> | Plus |
| 3L | 3180742..3180776 | 823..857 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 19:01:57 Download gff for
BS17750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3179347..3179421 | 9..85 | 94 | -> | Plus |
| arm_3L | 3179944..3180680 | 86..822 | 100 | -> | Plus |
| arm_3L | 3180742..3180776 | 823..857 | 94 | | Plus |
BS17750.complete Sequence
3740 bp assembled on 2010-06-09
GenBank Submission: KX800858
> BS17750.complete
GAAGTTATCAGTCGACATGGCTGGCACTGCGACCGCGACGCCAATGGAAA
TTGATGAGTTTGTTAATTCGTCCATAATTTCTTGGCTGGAATCATGTCTG
CCACGTGCCGAGCTTCTCGCCGGATACACCTCCCTGCTGGATGGCCACAT
AATTCACAGCGTCTGGCTGCAAATCGACCCCGAGCCGCAAAATAATCCCA
GCGAGCTGAACGATCTTAACGGGAAATCTCTCAGCATTGCGAGGGCCAAG
AACTTCGAGTGCGTCGTGAGGAATCTAAAGTCTTTCTTTGAGGAGGAGCT
TGGTCAAACCATACTGGTCCTACCCGATGCCTTCACCCTGGGTCATCATC
CGGAGAGTAAGAACGGGCTCGAACAGATGAAGACCTTGCTGACCCTGTTG
CTCGGCGCAGCTGTGCAATGTCCCAACAAGGAGCTATTTATTGCTCGCAT
CAAGGAGCTGGACTTAGAAACGCAACACGCTATTGTTGGACTGATCAAAC
AAGTGACCGACAGCCATAGTTTGGTGCTCACCGAGGACTCCTTGGAGCGA
CTTACGCCGCAGAGCATGTACACGCACATTTTGCGCCTGACCAAGGAGCG
GGACGTCATGTATCTCAAGTGGATCGATTTGGCGTGCGTAGAGACCGAAA
TGACAGCCAGCGATAATTTGGTGGAATGTGGCCAAGGTGTCAGCGTTACA
CGTTCCCCTTCGAACGGAACTGCCACCTCGACACCTTCATCTTCTTCCAA
TTCGGAAAGCAATCACCTTGCCGTAGAATGTGCCGATCTGCGTTCGAAGA
ACCGCAAGCTGCGTCAGGAACTCGAGGAAAAGTCCGAGAATCTTTTGGAG
CTACGTGAGGAGTTGGATGACAAGAAGGCTCGCTTTGACAAGCTGCGCCA
GGAAAGCCAAGAATGGTTTACGGAGGCCAAGCGGGCATCTGCATATCGTG
ACGAGGTGGACATCCTCCGGGAACGGGCTGAAAGAGCTGATCGCCTGGAG
GTGGAAGTTCAGAAGTACCGCGAGAAACTCGGAGACTCCGACTTTTACAA
ATCCCGCGTTGAGGAACTGCGGGAGGATAACCGTGTGCTGCTTGAATCCA
AGGAAATGCTGGAGGAGCAGTTGCAGCGTTACCGAAAAAGGTCTGAGCAT
GCCATCTCTCTGGAATCCGAGATTATTAAATACAAACAGAAGATAAACGA
CATGGCTCTCGAACGGGACGTGGATCGCTCCAAGCTAGAAGAGTTGCTGG
AGGAGAACTCGCAACTGCAACTGGTAGCCAGGAATCTCAACTCCACGATG
GATTTGGATAAATCCTTTTCCGAAAACGAAGACGATTGCAACTCAGGCGA
CAATAGTCTTTCGGAACAGCTAACGAACAATGCTCAGACCCGTGCACTCA
AGCTCGAGCTGGAGAACCGTCGTTTGACCGCCGCTCTGGAACAATTAAAA
GAGAGTAGCTTCCACGAATCCACCAGCAAGATGCTAGAACTGGAAAAGGA
GAAGAAAAAGCTGTCTCTAAAAATCGAACAGATGCAAGAAAACATCAATC
GTCTGACTCAGCAGAATGTCGAACTGGAAGGGGTCTTTAAAAATGCCCTG
GAGGAGAACAAAAAGTTACAGGATGCCGTGGATAATCGCCAAAAAAGCTA
CGATCGACAGAGCCTGGAACGCGAAGCTGACCGTCAAAAGCTTTCTGATG
CCGAGCAGCATGTCGAAACCTTAAACAAAGAAAAGCAACGTATCCAAACC
CTGAACGAAAGCATTCAGCGAAGAGCCGACGATCTTGAACGGTTGGCGGA
GAGCAAGACAAAGGAACTAGAGCAATACCTGGAAAAATCAAGGCAATACG
AGCTTACTAAACAGAAGCTCTATGAGATCGAAGCAAGGGTCTCCACGTAC
GAACGCGAAAACGCCAGCCTGCTCAAGGAAGTGTCCAAACTCAAGGAGGG
CAGCGAGCAAAAGTCTGTGCAGCTGGATGACAGTATTAATCGGCTCGATG
TCCAGAGCAAAGAACTACAAAAGCTGGGCAAAGCACTTGAGGATTCGGAG
CAAGTGCATCAAAAGCTTGTGGAACTGGAGAAGCAAAACCAAGAGCTAGC
TTCACAGCGCATCATTGATCAAGAGATGATAAGTACTCTTCGAAACGACT
TGGTGACTGGTACTCTCGTAACGAAGAAAGTGCGAAACAACTTGGAGAAA
CTAGGATTGGCGGACGAAGAGCCCGGTGAGCTCAATGTGGAGCATGTGGT
GGAGAAGTTGGTGCGCAACCCGGAGACTTTTAAAACGGTTCGCGAGATAA
TGCTAAACGTGACCCGAGAGCAGCTGGAGGAGGAGGAACGAGAAGGTGGC
GTCAAGTCCGACATGTGTGTGCTATGCCACCGTCAGGAGATCTTTACGGT
GGAAAAGAACATTGAACTCGCGGCTACTCCAGCTCCTGCACCAGCGCAAC
CATCTTCGCAGGAACTTCGCTTCGAACACAAGGTACGTCTAAGTCCAGCA
CGAGAATCAGCAGAGCTGACCCGTATTAAGGATTCCAACACTCAGCTTCA
GACTGAGAATGCTCGGCTCAGCGTGGACGTGGCTGCGCTGGGCTCGCAAA
TAACTTCGCTGAACACCCAGCATGTAGCCCTACAGCTGGCAAACTCCCAG
TTGGCTGCCGAAAAAGATTCGCTGCTCAAAGAGATCGATTCACTGCAGCA
GGAGCACAAGCATGCTTTGCAGGATCAGGTTACGTTGCAATGCCTGCATG
ATCAACTCTCCGCGGAGTACGAGTCTCTGAACAAGGACAAGGAGCAGCTA
AAGGCTGCAGTGCGGGACTTGCGTCAGGAGCTGCGAGATACCCGTGAACA
GCAGTCGGCATTGGAGCAACGCATTGAGGAGTTGACTATTCAGAACAGCA
ACATGAAAACATGCAGCGAGGATCTGTCAATCCTGCGTACGGAGCACTCC
AAACTGACAGACGACTTCCGCAATCTGTTCGCCACCAGCGATCGCTTCAA
GAACGAATACAAAAACATCCAGGAGCAGTACAAGATGGTACGCATGGAGC
ACTCCAGCCTTAAGCTACAAAACACAGAACTCTCCGGCGAGCTAAATGCT
AAGAGCGATCAGGTCCGTTGCCTACAGATGGAGTATAGCAAGGTTCAGCA
GCGTTGTGAGATGTTGATACAAAACAATGCTGAACTGGACTCGGAGCGCA
AGGCTCTGATGGACAACGTGTCCCAATTGCTCTCTCAATATCAGGAACTA
TTGGCCATATCCCTGGAGGACAAAAAGCACTTCCATGAGGAGGAGAAGAA
CTACACCGAACGGGTGCACAGCCTCAAGCGGCAGAAGGAAAAACTGGAGG
AGAAAATTATGGAGCATTACAAGAAGTCAGAAACCACAGTGCACAAGAAA
AAACCATTTGCCAGCATGCTGGTTAGAAGAGTGAAGAAGGCTAGCTCGGA
TCTAATGAACAAGGTGCCCAGTCGAAACCGTCGATCTTGGGTAGATGACG
CCCGTACCAATTCCCAGTTCGTGATCGGTTCCGAGTCAGGCGGCAATGAG
TCGGATAATAGCAATGAGGAGCCACTGTCCATTGCCTCCGACACGCACCT
GCTCCAGAGGAATGTCCCGCTCCGCCAGAGTCTGCAGCGGGATTTGCTGG
ATAACTCGATCCAACGCGGCGGTGCCGTGCGCAGTAGCCTGCAGGCTCAG
AAACTCTTGAAGCGCCAGACGTGAAAGCTTTCTAGACCAT
BS17750.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:50:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Girdin-RB | 3708 | CG12734-PB | 1..3708 | 17..3724 | 18540 | 100 | Plus |
| Girdin-RD | 3711 | CG12734-PD | 1..3711 | 17..3724 | 18475 | 99.9 | Plus |
| Girdin-RC | 4143 | CG12734-PC | 1..3688 | 17..3704 | 18440 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Girdin-RB | 5147 | CG12734-RB | 424..4131 | 17..3724 | 18540 | 100 | Plus |
| Girdin-RD | 5150 | CG12734-RD | 424..4134 | 17..3724 | 18475 | 99.9 | Plus |
| Girdin-RC | 5187 | CG12734-RC | 424..4111 | 17..3704 | 18440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3181086..3183144 | 1102..3160 | 10295 | 100 | Plus |
| 3L | 28110227 | 3L | 3179943..3180680 | 85..822 | 3690 | 100 | Plus |
| 3L | 28110227 | 3L | 3180742..3181021 | 823..1102 | 1400 | 100 | Plus |
| 3L | 28110227 | 3L | 3183198..3183438 | 3159..3399 | 1205 | 100 | Plus |
| 3L | 28110227 | 3L | 3183636..3183800 | 3476..3640 | 825 | 100 | Plus |
| 3L | 28110227 | 3L | 3183499..3183574 | 3400..3475 | 380 | 100 | Plus |
| 3L | 28110227 | 3L | 3179353..3179421 | 17..85 | 345 | 100 | Plus |
| 3L | 28110227 | 3L | 3183932..3183997 | 3639..3704 | 330 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:50:03 has no hits.
BS17750.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-09 09:28:48 Download gff for
BS17750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12734-RB | 420..4126 | 17..3723 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:24 Download gff for
BS17750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Girdin-RB | 424..4130 | 17..3723 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:57 Download gff for
BS17750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Girdin-RB | 424..4130 | 17..3723 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:57 Download gff for
BS17750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3179353..3179421 | 17..85 | 100 | -> | Plus |
| 3L | 3179944..3180680 | 86..822 | 100 | -> | Plus |
| 3L | 3180742..3181020 | 823..1101 | 100 | -> | Plus |
| 3L | 3181086..3183144 | 1102..3160 | 100 | -> | Plus |
| 3L | 3183200..3183438 | 3161..3399 | 100 | -> | Plus |
| 3L | 3183499..3183574 | 3400..3475 | 100 | -> | Plus |
| 3L | 3183636..3183799 | 3476..3639 | 100 | -> | Plus |
| 3L | 3183933..3183997 | 3640..3704 | 100 | -> | Plus |
| 3L | 3184252..3184270 | 3705..3723 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:24 Download gff for
BS17750.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3179353..3179421 | 17..85 | 100 | -> | Plus |
| arm_3L | 3179944..3180680 | 86..822 | 100 | -> | Plus |
| arm_3L | 3180742..3181020 | 823..1101 | 100 | -> | Plus |
| arm_3L | 3181086..3183144 | 1102..3160 | 100 | -> | Plus |
| arm_3L | 3183200..3183438 | 3161..3399 | 100 | -> | Plus |
| arm_3L | 3183499..3183574 | 3400..3475 | 100 | -> | Plus |
| arm_3L | 3183636..3183799 | 3476..3639 | 100 | -> | Plus |
| arm_3L | 3183933..3183997 | 3640..3704 | 100 | -> | Plus |
| arm_3L | 3184252..3184270 | 3705..3723 | 100 | | Plus |
BS17750.pep Sequence
Translation from 16 to 3723
> BS17750.pep
MAGTATATPMEIDEFVNSSIISWLESCLPRAELLAGYTSLLDGHIIHSVW
LQIDPEPQNNPSELNDLNGKSLSIARAKNFECVVRNLKSFFEEELGQTIL
VLPDAFTLGHHPESKNGLEQMKTLLTLLLGAAVQCPNKELFIARIKELDL
ETQHAIVGLIKQVTDSHSLVLTEDSLERLTPQSMYTHILRLTKERDVMYL
KWIDLACVETEMTASDNLVECGQGVSVTRSPSNGTATSTPSSSSNSESNH
LAVECADLRSKNRKLRQELEEKSENLLELREELDDKKARFDKLRQESQEW
FTEAKRASAYRDEVDILRERAERADRLEVEVQKYREKLGDSDFYKSRVEE
LREDNRVLLESKEMLEEQLQRYRKRSEHAISLESEIIKYKQKINDMALER
DVDRSKLEELLEENSQLQLVARNLNSTMDLDKSFSENEDDCNSGDNSLSE
QLTNNAQTRALKLELENRRLTAALEQLKESSFHESTSKMLELEKEKKKLS
LKIEQMQENINRLTQQNVELEGVFKNALEENKKLQDAVDNRQKSYDRQSL
EREADRQKLSDAEQHVETLNKEKQRIQTLNESIQRRADDLERLAESKTKE
LEQYLEKSRQYELTKQKLYEIEARVSTYERENASLLKEVSKLKEGSEQKS
VQLDDSINRLDVQSKELQKLGKALEDSEQVHQKLVELEKQNQELASQRII
DQEMISTLRNDLVTGTLVTKKVRNNLEKLGLADEEPGELNVEHVVEKLVR
NPETFKTVREIMLNVTREQLEEEEREGGVKSDMCVLCHRQEIFTVEKNIE
LAATPAPAPAQPSSQELRFEHKVRLSPARESAELTRIKDSNTQLQTENAR
LSVDVAALGSQITSLNTQHVALQLANSQLAAEKDSLLKEIDSLQQEHKHA
LQDQVTLQCLHDQLSAEYESLNKDKEQLKAAVRDLRQELRDTREQQSALE
QRIEELTIQNSNMKTCSEDLSILRTEHSKLTDDFRNLFATSDRFKNEYKN
IQEQYKMVRMEHSSLKLQNTELSGELNAKSDQVRCLQMEYSKVQQRCEML
IQNNAELDSERKALMDNVSQLLSQYQELLAISLEDKKHFHEEEKNYTERV
HSLKRQKEKLEEKIMEHYKKSETTVHKKKPFASMLVRRVKKASSDLMNKV
PSRNRRSWVDDARTNSQFVIGSESGGNESDNSNEEPLSIASDTHLLQRNV
PLRQSLQRDLLDNSIQRGGAVRSSLQAQKLLKRQT*
BS17750.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:57:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Girdin-PB | 1235 | CG12734-PB | 1..1235 | 1..1235 | 6155 | 100 | Plus |
| Girdin-PD | 1236 | CG12734-PD | 1..1236 | 1..1235 | 6140 | 99.8 | Plus |
| Girdin-PC | 1380 | CG12734-PC | 1..1229 | 1..1229 | 6127 | 100 | Plus |
| Girdin-PA | 1381 | CG12734-PA | 1..1229 | 1..1229 | 6127 | 100 | Plus |
| Girdin-PE | 1346 | CG12734-PE | 1..1210 | 1..1210 | 6031 | 99.9 | Plus |
