Clone Sequence Records
BS17755.complete Sequence
4058 bp assembled on 2009-12-07
GenBank Submission: KX801499
> BS17755.complete
GAAGTTATCAGTCGACATGGCTTGCGAAGTAAAACACTGCGGAGAAATCC
GTGATTTTAAGAAAGTCCAAGAATACTTTGGACTCGGACATGATGACAAC
TGGTTAAACGCGATAAACCATGCCATTTCACCAACTGGGGAACTGATTGC
CATGGCGCAGGGTGAAAAGTTGGCATTCCTCAGCACCTGCTGGAGCAGCC
ATGGCAATGGCAACACCTACGTTCTTGGCTGGTGCGGCGAGCTGGAGGAT
CCCAACCAAATCGTGACTAGCCTCACCTGCTTGCCGATGACTCAGAACAA
AAGCACCGATGGAGCCATCGAATGGACCTGCGTGGCAGTTGGCCTGTGCT
CTGGCATGGTTACCTTCTACACGGACTCGGGTGTAAAACTCTTCTCGCAA
TGTTGCCAAGAGGATCCAGTAATTGGAGTCAAGCTGCAGTCCGCTCCGCG
ACATTCTGAGGCAGATTCACTGCTCTACATCATCTATCCTCGCTGCCTGT
GCTTCATCCAGGGCCAGGACATTTTGCCCACGCTGAACAATTGCCGGCAC
AATGTGCAAAGAGGTGCATTGGAGCGTAGTTCGTATCCCACTGCTGATGT
GGTGCCATTCCAGAAGTATAAGTTCAAGCAAGAACGAGAGGCCGTCATTA
ATGATGCTGCCATCTCTACCACCCAGCGACCTCCCACATACGACTACATT
GTTCAGCAGACCATCGGTCTCGGTTATTTCGCCAAGGTGCACGCCACGCC
GCCGAGGAGCTCACAGGTTCTGGCCGCCGGAGCAGAACCCTATTTGGGCT
TCTTTCAGGCGGAGGAGGGTTATAAAACGATGTCGCTGGGTGAGGTTGCC
AAAGACGTAATCGGAATAGCTTACAAGAACCTGCTGGGCGGAATCTTTCG
ACGCGCTCCAGAGCCCCTGCCATCGCCCGAGGAATCACCACTGCCGGTGC
CCACGAAAGAAGCACCGATGCGGATTCGCTGTCGTCTATATGACGGCAAG
AGAGATGGACTGACCTTGTCTGTGGCACCTGGTGGACGCCTGGCTGTCGT
TACCGATAATCTCGACCGTGTAATGTTGGTGGATACGCACCAGGCTATTA
TCTTGCGTGTTTGGAAGGGCTATCGAGATGCACAGTGCGCATTCGTGCCA
GTTAAAGAAAAATCCGTTCGCGGTATCAAAACGCACAAGCGAAAGGCTTT
GTTCCTGGTGATCTACGCTCCTCGAATGGGCTGCCTGGACATATGGGCTT
TGCAAAACGGACCCAAGGTGGCTGCATTCAATGTTTCGAAGAGCGGGCAA
CTTATGTACAACAATCATAGTCCCCTAGGCTCAGGCGGCAGCAGTGGATC
TGGTAATAGCAGTAGTCAGTCAAGAAAATCTTTAGCCATCAATCATTGCT
TGTTCCTGGACCCCAGCGATGGCAGCCTGAAGGAGATACACATTCCTTTT
CACTACGCGCTCAGCGAGACCAGCTCCCAGACATCACGGGATATCCATAT
GCTGAGGCGCCTCAGAAACCAGCTCAGAACCATAAACCATGGCCAAGCCA
AAGATGAAGCGCTGCAGGAGATTGGCGAACTGGCAAGTGAACTGCAGACG
TTAGAGGTGCGACAACAGTGTCTGGAGATGTTGCTTAAGAGCAAGAAGCT
GCAGCCACAGGTGTTTCAATCCATCATTAATGCCTTCATAAAGAAACCTC
TTTCTGAATCAACGGGCTCCGAGGAGTTTGTCAACCAAATCGAGAACTAT
AAACGCTTGACTGATCTCTACTTGGCCCTAAGTCAAGCCAATCAGCGTGA
AGACAACGAGCCACCCGTAGAATACTTGGAGCTTTCCGATGCTGATCTTG
TCACCATTAACAAGTTGGTTCTGCTCCTGGACGATGGCACCGAGAAGGAT
AAACCCGCCGCCACTCGTGAAGTGAGCTTCAAGTTGCAGGCGGAGCACAA
GACCGAAGAATTTGTCGATTACCTGAGCATCTTTAACATCGATAGTCCGG
ATGGGATAAGTCTACTTCCGGAGAAGTCAGATAAGTTTGGCGCCGTAAGC
ATCGATCTCTTTAGTCAGTTCTTTGCCCAAGGTCTATGCTTTGGCCAATT
CAAGCAGTGGATCAATCAGGCGTGTTTGCCCAGCAGAGATTTGCTTAAAT
TGATTATTTGGTTTTGGCTTGAGAAGCCCTTTAAGTACAACAACTGTGAT
GAAGTAGTGGAGGACATGTCCAGAATTGCTGCTATGGTGCAGACCATTTG
TGATCTGGCTGGTGAACACATCCATGACTATGCCTACAATGCCATTTCAC
CGTGGTGGCAGGAAGTTCGGGAACTTCTCTTGGAGAGTAAACAATTTTCG
GGCTTGCTGGTGGCCATTGTATGCAAAACGGTAGCGACTAATTTGTGGCG
AAACAGAAAAGAGGGATCTTGTGATGAATCCTCGCAGAACGAAGATGATG
AGCGCTGGGAGCGTATCTCCCACGATGAGGCTCAGTGGGGATTGCTCACT
GGCAAGCTAGAGGATGTGGCCGTGCTAGGAGCCATACTAAGTAAGCCTCT
CATCTGCCGGGATCCTGTTGGTCCAGAGATGTCCTACGAGCCACCGGACT
GCAGTCTCAAAAGCATTGTGAGCAGTGGCAAAGGCATCGTCACCGAACTG
ACAGCCAAGTGGCTGATCAGTGCACAATTGCATCCGAGTAAAGTTTTGGA
GATATCGCCTCCCGAAAACGAGTTAGACGACGAGAGCAAAGTTAAGATAA
AGGATGAGCCTACCAAGGAGTCAGTCGATGAAGACGCGGAATCAGAAGAG
GATTTGGAAATGGCAAAGGAAGTGTACGCGGCGAGTAAAGAAGCCCATGA
ACCTATTCTTGAAAGATTGGCTCTGCTGCGTGCGCATTTTCCCTTCAGCT
TGGAATCGGGCGTCCTCTTAAGTCTCATGTCGTGGCAGTACATGGTCCAG
TGGAGCAAGCAGCTCTCATCGCTGGACCACCTAAAGGCAGCATTACTTTG
TTTAAACCAATTCCGTACACCTGACTGGGCCCTGAAGCATGGAATATGTT
GCATGCTGTGGAATGCCACCCTGAAGTTTCCTCTACAGGCGGCGGCGAAG
CTTATTCAAAAAGTGGGACGCCTGCCAGTGGACAAGATGTGCCAGCAAGA
TCTCGAGATGTCTGCGGGTAAAGTGCCAGAGTTTCTAGAACTCAGCCTCG
AATTCCTGCAGCATTTCACCGCTTCCATGGAGCACGATAAGCGTGAACTG
CACTTCGAGCAGTCGCTCAGCGAAGGAGCCCTGCCATTGCAGTTTCTGGC
TCTCCAGCAGCACCATGCCATGCCGCAGCTGCTCCGTCTTCAAACAGAAC
TGTGCAGCGTGCTGCACTTCGTTTCCTTTTTCCAGCTGCGCATTCCAAAA
CCACTGACCACGCTTTTTGACTCCATGAGCAACAAAGCTCTGCTGGCGGA
CATCAATAAGGAACTGCCTTATGTTTTGCCTGCACCAGATCTTGTCCTGC
AACAGCAGCGCACTGAGTTCCTGTGTCGCCTTGTCACCGCTACCATGGAT
CTGATTAGAGAGGATTTGGAGCAGCTGTACATTCTCGATCATGTTTTCTA
CATGGGCAAGATCTGTGCCTTAGCCGACAGTTGGGAGGTCGATAAACTTC
CTATCCTACGACGGCAGGTGGTGGAACTGTACGCTTTTGGGTATGATGCG
GAGGCTCAAGTGTTGCTCCAGGACATCAGCGATGACGAGGAGCTGGGCCG
ACTGCTGCTGGAGATCGCTGGCCGTAGACTTAATCTTTACGCACAGAGCT
CGCAGTCCACGTTCCTGAAGATTGCCTCTGTTGGCCACCAGTTGCTGGCC
TACCTAGACAACCTGAAGGAACCGATGACGGAGAACAACATTCAGATCGC
GGCCACCAAGCCCGACGAGATCGATGTGGCTGCCCTGGACAGGCTGTTGT
CGCATGCCTACAAATACCTTTGCCGGCGCGAGTCCAAGCAGCTGCCCATC
ATTGGCCAGATGTACAACGCCGTGCGTATCCTGCAGAATTAGAAGCTTTC
TAGACCAT
BS17755.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:17:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rab3-GAP-RA | 4026 | CG7061-PA | 1..4026 | 17..4042 | 20130 | 100 | Plus |
| Rab3-GAP-RB | 4023 | CG7061-PB | 1..4023 | 17..4042 | 20050 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:17:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rab3-GAP-RA | 4340 | CG7061-RA | 29..4054 | 17..4042 | 20130 | 100 | Plus |
| Rab3-GAP-RB | 4337 | CG7061-RB | 29..4051 | 17..4042 | 20050 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:17:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12060869..12062663 | 2196..402 | 8975 | 100 | Minus |
| 2L | 23513712 | 2L | 12059211..12060340 | 3669..2540 | 5650 | 100 | Minus |
| 2L | 23513712 | 2L | 12062716..12063026 | 402..92 | 1555 | 100 | Minus |
| 2L | 23513712 | 2L | 12060586..12060804 | 2414..2196 | 1095 | 100 | Minus |
| 2L | 23513712 | 2L | 12058830..12059030 | 3865..3665 | 1005 | 100 | Minus |
| 2L | 23513712 | 2L | 12058590..12058767 | 4042..3865 | 890 | 100 | Minus |
| 2L | 23513712 | 2L | 12060398..12060527 | 2541..2412 | 650 | 100 | Minus |
| 2L | 23513712 | 2L | 12063081..12063156 | 92..17 | 380 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:17:32 has no hits.
BS17755.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:47:55 Download gff for
BS17755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rab3-GAP-RA | 16..4041 | 17..4042 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:10:45 Download gff for
BS17755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab3-GAP-RA | 29..4054 | 17..4042 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:01:46 Download gff for
BS17755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rab3-GAP-RA | 16..4041 | 17..4042 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:08:15 Download gff for
BS17755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab3-GAP-RA | 29..4054 | 17..4042 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:08:15 Download gff for
BS17755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12060398..12060525 | 2414..2541 | 100 | <- | Minus |
| 2L | 12060587..12060803 | 2197..2413 | 100 | <- | Minus |
| 2L | 12058590..12058766 | 3866..4042 | 100 | <- | Minus |
| 2L | 12058830..12059027 | 3668..3865 | 100 | <- | Minus |
| 2L | 12059213..12060338 | 2542..3667 | 100 | <- | Minus |
| 2L | 12060869..12062662 | 403..2196 | 100 | <- | Minus |
| 2L | 12062716..12063025 | 93..402 | 100 | <- | Minus |
| 2L | 12063081..12063156 | 17..92 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:10:45 Download gff for
BS17755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12058590..12058766 | 3866..4042 | 100 | <- | Minus |
| arm_2L | 12058830..12059027 | 3668..3865 | 100 | <- | Minus |
| arm_2L | 12059213..12060338 | 2542..3667 | 100 | <- | Minus |
| arm_2L | 12060398..12060525 | 2414..2541 | 100 | <- | Minus |
| arm_2L | 12060587..12060803 | 2197..2413 | 100 | <- | Minus |
| arm_2L | 12060869..12062662 | 403..2196 | 100 | <- | Minus |
| arm_2L | 12062716..12063025 | 93..402 | 100 | <- | Minus |
| arm_2L | 12063081..12063156 | 17..92 | 100 | | Minus |
BS17755.3prime Sequence
938 bp (760 high quality bases) assembled on 2007-05-29
> BS17755.3prime
ATGGTCTAGAAAGCTTCTAATTCTGCAGGATACGCACGGCGTTGTACATC
TGGCCAATGATGGGCAGCTGCTTGGACTCGCGCCGGCAAAGGTATTTGTA
GGCATGCGACAACAGCCTGTCCAGGGCAGCCACATCGATCTCGTCGGGCT
TGGTGGCCGCGATCTGAATGTTGTTCTCCGTCATCGGTTCCTTCAGGTTG
TCTAGGTAGGCCAGCAACTGGTGGCCAACAGAGGCAATCTTCAGGAACGT
GGACTGCGAGCTCTGTGCGTAAAGATTAAGTCTACGGCCAGCGATCTCCA
GCAGCAGTCGGCCCAGCTCCTCGTCATCGCTGATGTCCTGGAGCAACACT
TGAGCCTCCGCATCATACCCAAAAGCGTACAGTTCCACCACCTGCCGTCG
TAGGATAGGAAGTTTATCGACCTCCCAACTGTCGGCTAAGGCACAGATCT
TGCCCATGTAGAAAACATGATCGAGAATGTACAGCTGCTCCAAATCCTCT
CTAATCAGATCCATGGTAGCGGTGACAAGGCGACACAGGAACTCAGTGCG
CTGCTGTTGCAGGACAAGATCTGGTGCAGGCAAAACATAAGGCAGTTCCT
TATTGATGTCCGCCAGCAGAGCTTTGTTGCTCATGGAGTCAAAAAGCGTG
GTCAGTGGTTTTGGAATGCGCAGCTGGAAAAAGGAAACGAAGTGCAGCAC
GCTGCACAGTTCTGTTTGAAGACGGAGCAGCTGCGGCATGGCATGGTGCT
GCTGGAGAGCCAGAAACTGCAATGGCAGGGCTCCTTCGCTGAGCGACTGC
TCGAAGTGCAGTTCACGCTTATCGTGCTCCATGGAAGCGGTGAAATGCTG
CANGAATTCGAGGCTGAGTTCTAGAAACTCTGGCACTTTACCCGCAGACA
TCTCGAGATCTTGCTGGCACATCTTGTCCACTGCCAGG
BS17755.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:29:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7061-PA | 4026 | rab3-GAP-RA | 3110..4026 | 933..17 | 4566 | 99.8 | Minus |
| CG7061-PB | 3891 | rab3-GAP-RB | 2975..3891 | 933..17 | 4566 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:45:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rab3-GAP-RA | 4340 | CG7061-RA | 3133..4054 | 938..17 | 4584 | 99.8 | Minus |
| Rab3-GAP-RB | 4337 | CG7061-RB | 3133..4051 | 938..17 | 4529 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:44:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12059211..12059759 | 390..938 | 2719 | 99.6 | Plus |
| 2L | 23513712 | 2L | 12058830..12059030 | 194..394 | 1005 | 100 | Plus |
| 2L | 23513712 | 2L | 12058590..12058767 | 17..194 | 890 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 06:45:00 has no hits.
BS17755.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:29:05 Download gff for
BS17755.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7061-PB | 2970..3891 | 17..938 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 00:03:03 Download gff for
BS17755.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab3-GAP-RA | 3133..4057 | 14..938 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:14:13 Download gff for
BS17755.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab3-GAP-RA | 3133..4057 | 14..938 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:14:13 Download gff for
BS17755.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12058587..12058766 | 14..193 | 99 | <- | Plus |
| 2L | 12058830..12059027 | 194..391 | 100 | <- | Plus |
| 2L | 12059213..12059759 | 392..938 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 00:03:03 Download gff for
BS17755.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12058587..12058766 | 14..193 | 99 | <- | Plus |
| arm_2L | 12058830..12059027 | 194..391 | 100 | <- | Plus |
| arm_2L | 12059213..12059759 | 392..938 | 99 | | Plus |
BS17755.5prime Sequence
849 bp (730 high quality bases) assembled on 2007-05-29
> BS17755.5prime
GAAGTTATCAGTCGACATGGCTTGCGAAGTAAAACACTGCGGAGAAATCC
GTGATTTTAAGAAAGTCCAAGAATACTTTGGACTCGGACATGATGACAAC
TGGTTAAACGCGATAAACCATGCCATTTCACCAACTGGGGAACTGATTGC
CATGGCGCAGGGTGAAAAGTTGGCATTCCTCAGCACCTGCTGGAGCAGCC
ATGGCAATGGCAACACCTACGTTCTTGGCTGGTGCGGCGAGCTGGAGGAT
CCCAACCAAATCGTGACTAGCCTCACCTGCTTGCCGATGACTCAGAACAA
AAGCACCGATGGAGCCATCGAATGGACCTGCGTGGCAGTTGGCCTGTGCT
CTGGCATGGTTACCTTCTACACGGACTCGGGTGTAAAACTCTTCTCGCAA
TGTTGCCAAGAGGATCCAGTAATTGGAGTCAAGCTGCAGTCCGCTCCGCG
ACATTCTGAGGCAGATTCACTGCTCTACATCATCTATCCTCGCTGCCTGT
GCTTCATCCAGGGCCAGGACATTTTGCCCACGCTGAACAATTGCCGGCAC
AATGTGCAAAGAGGTGCATTGGAGCGTAGTTCGTATCCCACTGCTGATGT
GGTGCCATTCCAGAAGTATAAGTTCAAGCAAGAACGAGAGGCCGTCATTA
ATGATGCTGCCATCTCTACCACCCAGCGACCTCCCACATACGACTACATT
GTTCAGCAGACCATCGGTCTCGGTTATTTCGCCAAGGTGCACGCCACGCC
GCCGAGGAGCTCACAGGTTCTGGCCGCCGGAGCAGAACCCTATTTGGGCT
TCTTTCANGCGGAGGAGGGTATAAAACGATGTCGCTGGGTGAGGTTGCC
BS17755.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:29:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7061-PA | 4026 | rab3-GAP-RA | 1..804 | 17..820 | 4001 | 99.8 | Plus |
| CG7061-PB | 3891 | rab3-GAP-RB | 1..669 | 152..820 | 3326 | 99.8 | Plus |
| CG7061-PA | 4026 | rab3-GAP-RA | 805..834 | 820..849 | 150 | 100 | Plus |
| CG7061-PB | 3891 | rab3-GAP-RB | 670..699 | 820..849 | 150 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:58:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rab3-GAP-RB | 4337 | CG7061-RB | 29..862 | 17..849 | 4134 | 99.8 | Plus |
| Rab3-GAP-RA | 4340 | CG7061-RA | 29..862 | 17..849 | 4134 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:58:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12062215..12062663 | 849..402 | 2184 | 99.6 | Minus |
| 2L | 23513712 | 2L | 12062716..12063026 | 402..92 | 1555 | 100 | Minus |
| 2L | 23513712 | 2L | 12063081..12063156 | 92..17 | 380 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 23:58:53 has no hits.
BS17755.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:29:10 Download gff for
BS17755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7061-PA | 1..834 | 17..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 03:43:13 Download gff for
BS17755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab3-GAP-RA | 24..862 | 10..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:02:30 Download gff for
BS17755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab3-GAP-RA | 24..862 | 10..849 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:02:30 Download gff for
BS17755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12062215..12062662 | 403..849 | 99 | <- | Minus |
| 2L | 12062716..12063025 | 93..402 | 100 | <- | Minus |
| 2L | 12063081..12063161 | 10..92 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 03:43:13 Download gff for
BS17755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12062215..12062662 | 403..849 | 99 | <- | Minus |
| arm_2L | 12062716..12063025 | 93..402 | 100 | <- | Minus |
| arm_2L | 12063081..12063161 | 10..92 | 96 | | Minus |
BS17755.pep Sequence
Translation from 16 to 4041
> BS17755.pep
MACEVKHCGEIRDFKKVQEYFGLGHDDNWLNAINHAISPTGELIAMAQGE
KLAFLSTCWSSHGNGNTYVLGWCGELEDPNQIVTSLTCLPMTQNKSTDGA
IEWTCVAVGLCSGMVTFYTDSGVKLFSQCCQEDPVIGVKLQSAPRHSEAD
SLLYIIYPRCLCFIQGQDILPTLNNCRHNVQRGALERSSYPTADVVPFQK
YKFKQEREAVINDAAISTTQRPPTYDYIVQQTIGLGYFAKVHATPPRSSQ
VLAAGAEPYLGFFQAEEGYKTMSLGEVAKDVIGIAYKNLLGGIFRRAPEP
LPSPEESPLPVPTKEAPMRIRCRLYDGKRDGLTLSVAPGGRLAVVTDNLD
RVMLVDTHQAIILRVWKGYRDAQCAFVPVKEKSVRGIKTHKRKALFLVIY
APRMGCLDIWALQNGPKVAAFNVSKSGQLMYNNHSPLGSGGSSGSGNSSS
QSRKSLAINHCLFLDPSDGSLKEIHIPFHYALSETSSQTSRDIHMLRRLR
NQLRTINHGQAKDEALQEIGELASELQTLEVRQQCLEMLLKSKKLQPQVF
QSIINAFIKKPLSESTGSEEFVNQIENYKRLTDLYLALSQANQREDNEPP
VEYLELSDADLVTINKLVLLLDDGTEKDKPAATREVSFKLQAEHKTEEFV
DYLSIFNIDSPDGISLLPEKSDKFGAVSIDLFSQFFAQGLCFGQFKQWIN
QACLPSRDLLKLIIWFWLEKPFKYNNCDEVVEDMSRIAAMVQTICDLAGE
HIHDYAYNAISPWWQEVRELLLESKQFSGLLVAIVCKTVATNLWRNRKEG
SCDESSQNEDDERWERISHDEAQWGLLTGKLEDVAVLGAILSKPLICRDP
VGPEMSYEPPDCSLKSIVSSGKGIVTELTAKWLISAQLHPSKVLEISPPE
NELDDESKVKIKDEPTKESVDEDAESEEDLEMAKEVYAASKEAHEPILER
LALLRAHFPFSLESGVLLSLMSWQYMVQWSKQLSSLDHLKAALLCLNQFR
TPDWALKHGICCMLWNATLKFPLQAAAKLIQKVGRLPVDKMCQQDLEMSA
GKVPEFLELSLEFLQHFTASMEHDKRELHFEQSLSEGALPLQFLALQQHH
AMPQLLRLQTELCSVLHFVSFFQLRIPKPLTTLFDSMSNKALLADINKEL
PYVLPAPDLVLQQQRTEFLCRLVTATMDLIREDLEQLYILDHVFYMGKIC
ALADSWEVDKLPILRRQVVELYAFGYDAEAQVLLQDISDDEELGRLLLEI
AGRRLNLYAQSSQSTFLKIASVGHQLLAYLDNLKEPMTENNIQIAATKPD
EIDVAALDRLLSHAYKYLCRRESKQLPIIGQMYNAVRILQN*
BS17755.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:18:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rab3-GAP-PA | 1341 | CG7061-PA | 1..1341 | 1..1341 | 6979 | 100 | Plus |
| Rab3-GAP-PB | 1340 | CG7061-PB | 1..1340 | 1..1341 | 6962 | 99.9 | Plus |
