Clone BS17774 Report

Search the DGRC for BS17774

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:177
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptCG9293-RA
Protein status:BS17774.pep: full length peptide match
Sequenced Size:890

Clone Sequence Records

BS17774.complete Sequence

890 bp assembled on 2010-02-09

GenBank Submission: KX801472

> BS17774.complete
GAAGTTATCAGTCGACATGTCATCGGCTATATACCTAGAGAACTATTTAG
ACGGATTGGAAAGTCTGCCAACGGAGCTGGAGAGAAATTTTAAGCTGATG
CGAAAATTAGACGATCGAGCACAAACAGCGATGAAGAGCATCGATAGCCA
TGCCAAGGACTTTATGCGCAAGCTGGGCGAGAACGGGGCCATGAGCGAGG
ATGAGAGGAGGGAGCGCCAGGAGGATATCAAGGCACTGTTCGGAAAGGCC
AAGGAGTACAGCGACGACAAGGTGCAGCTGGCCATTCAGACCTACGAACT
AGTGGACAAGCAGATACGGCGACTGGACAACGATTTAGCACGCTTCGAGG
GTGAGATTCAGGAGAAGGCCTCATCCACGCGTGCCAAATCCGAGGAAGTG
GTGGCCAAGAAAGGTCGCAAAAAAACCAAGGACAGCAAGACGACGGGCAA
AAAGAAAAAGTCCGCATCCTCGGATGAGGAAACTGGGCGCGGCAACAACC
AATCTAACGCCAATTCCAGTGTCAATTCGAGCAGCAATGCCGGGCAAGGT
AGCAAAAAGAAAAAGTCCAAGGTAAATCAAGAAAAAGAAACTCGCAAGGG
GGGCGCTCAAAAGAAAACCGTCGAGGTTGATGACTCTGAGAAGGAATCGT
GCCACACGGCCGCCACTCATCCCAGCGACGTTATGGACATGCCCGTCGAT
CCCAATGAGCCCACATATTGCCTATGCCACCAGGTGTCCTATGGAGAGAT
GATTGGCTGCGACAATCCCGACTGTCCCATCGAGTGGTTTCACTTCGCTT
GTGTTGGCCTCACCACAAAGCCAAAGGGCAAGTGGTTCTGTCCCAAGTGT
ACGCAGGACAGAAAGAAGAAATAGAAGCTTTCTAGACCAT

BS17774.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:07:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG9293-RA 858 CG9293-PA 1..858 17..874 4290 100 Plus
CG9293-RB 816 CG9293-PB 1..555 17..571 2775 100 Plus
CG9293-RB 816 CG9293-PB 553..816 611..874 1320 100 Plus
Ing3-RA 2061 CG6632-PA 1869..2021 697..849 210 75.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:07:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG9293-RA 1044 CG9293-RA 100..958 17..875 4295 100 Plus
CG9293-RB 1002 CG9293-RB 100..654 17..571 2775 100 Plus
CG9293-RB 1002 CG9293-RB 652..916 611..875 1325 100 Plus
Ing3-RA 2298 CG6632-RA 1997..2149 697..849 210 75.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:07:01
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13386757..13387114 410..53 1790 100 Minus
2L 23513712 2L 13386488..13386690 613..411 1015 100 Minus
2L 23513712 2L 13386099..13386259 772..612 805 100 Minus
2L 23513712 2L 13385934..13386036 875..773 515 100 Minus
X 23542271 X 18650867..18651019 849..697 210 75.8 Minus
2L 23513712 2L 13387176..13387213 54..17 190 100 Minus
Blast to na_te.dros performed on 2014-11-28 03:07:02 has no hits.

BS17774.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:26:44 Download gff for BS17774.complete
Subject Subject Range Query Range Percent Splice Strand
CG9293-RA 1..858 17..874 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:15:11 Download gff for BS17774.complete
Subject Subject Range Query Range Percent Splice Strand
CG9293-RA 87..931 17..861 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:42 Download gff for BS17774.complete
Subject Subject Range Query Range Percent Splice Strand
CG9293-RA 100..944 17..861 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:26:45 Download gff for BS17774.complete
Subject Subject Range Query Range Percent Splice Strand
CG9293-RA 79..952 9..882 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:15 Download gff for BS17774.complete
Subject Subject Range Query Range Percent Splice Strand
CG9293-RA 100..944 17..861 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:15 Download gff for BS17774.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13386488..13386690 411..613 100 <- Minus
2L 13386757..13387113 54..410 100 <- Minus
2L 13387177..13387213 17..53 100   Minus
2L 13385948..13386036 773..861 100 <- Minus
2L 13386099..13386257 614..772 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:42 Download gff for BS17774.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13385948..13386036 773..861 100 <- Minus
arm_2L 13386099..13386257 614..772 100 <- Minus
arm_2L 13386488..13386690 411..613 100 <- Minus
arm_2L 13386757..13387113 54..410 100 <- Minus
arm_2L 13387177..13387213 17..53 100   Minus

BS17774.3prime Sequence

834 bp (794 high quality bases) assembled on 2007-05-29

> BS17774.3prime
ATGGTCTAGAAAGCTTCTATTTCTTCTTTCTGTCCTGCGTACACTTGGGA
CAGAACCACTTGCCCTTTGGCTTTGTGGTGAGGCCAACACAAGCGAAGTG
AAACCACTCGATGGGACAGTCGGGATTGTCGCAGCCAATCATCTCTCCAT
AGGACACCTGGTGGCATAGGCAATATGTGGGCTCATTGGGATCGACGGGC
ATGTCCATAACGTCGCTGGGATGAGTGGCGGCCGTGTGGCACGATTCCTT
CTCAGAGTCATCAACCTCGACGGTTTTCTTTTGAGCGCCCCCCTTGCGAG
TTTCTTTTTCTTGATTTACCTTGGACTTTTTCTTTTTGCTACCTTGCCCG
GCATTGCTGCTCGAATTGACACTGGAATTGGCGTTAGATTGGTTGTTGCC
GCGCCCAGTTTCCTCATCCGAGGATGCGGACTTTTTCTTTTTGCCCGTCG
TCTTGCTGTCCTTGGTTTTTTTGCGACCTTTCTTGGCCACCACTTCCTCG
GATTTGGCACGCGTGGATGAGGCCTTCTCCTGAATCTCACCCTCGAAGCG
TGCTAAATCGTTGTCCAGTCGCCGTATCTGCTTGTCCACTAGTTCGTAGG
TCTGAATGGCCAGCTGCACCTTGTCGTCGCTGTACTCCTTGGCCTTTCCG
AACAGTGCCTTGATATCCTCCTGGCGCTCCCTCCTCTCATCCTCGCTCAT
GGCCCCGTTCTCGCCCAGCTTGCGCATAAAGTCCTTGGCATGGCTATCGA
TGCTCTTCATCGCTGTTTGTGCTCGATCGTCTAATTTTCGCATCAGCTTA
AAATTTCTCTCCAGCTCCGTTGGCAGACTTTCCA

BS17774.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:31:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG9293-PA 858 CG9293-RA 41..858 834..17 4090 100 Minus
CG9293-PB 816 CG9293-RB 41..555 834..320 2575 100 Minus
CG9293-PB 816 CG9293-RB 553..816 280..17 1320 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:43:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG9293-RA 1044 CG9293-RA 140..958 834..16 4095 100 Minus
CG9293-RB 1002 CG9293-RB 140..654 834..320 2575 100 Minus
CG9293-RB 1002 CG9293-RB 652..916 280..16 1325 100 Minus
Ing3-RA 2298 CG6632-RA 1997..2149 194..42 210 77.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:42:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13386757..13387110 481..834 1770 100 Plus
2L 23513712 2L 13386488..13386690 278..480 1015 100 Plus
2L 23513712 2L 13386099..13386259 119..279 805 100 Plus
2L 23513712 2L 13385934..13386036 16..118 515 100 Plus
X 23542271 X 18650867..18651019 42..194 210 75.8 Plus
Blast to na_te.dros performed on 2015-02-12 04:42:59 has no hits.

BS17774.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:31:56 Download gff for BS17774.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9293-PA 42..858 17..833 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:14:50 Download gff for BS17774.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9293-RA 141..965 9..833 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:00:22 Download gff for BS17774.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9293-RA 141..965 9..833 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:00:22 Download gff for BS17774.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 13386757..13387109 481..833 100   Plus
2L 13385927..13386036 9..118 97 <- Plus
2L 13386099..13386257 119..277 100 <- Plus
2L 13386488..13386690 278..480 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:14:50 Download gff for BS17774.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13385927..13386036 9..118 97 <- Plus
arm_2L 13386099..13386257 119..277 100 <- Plus
arm_2L 13386488..13386690 278..480 100 <- Plus
arm_2L 13386757..13387109 481..833 100   Plus

BS17774.5prime Sequence

814 bp (809 high quality bases) assembled on 2007-05-29

> BS17774.5prime
GAAGTTATCAGTCGACATGTCATCGGCTATATACCTAGAGAACTATTTAG
ACGGATTGGAAAGTCTGCCAACGGAGCTGGAGAGAAATTTTAAGCTGATG
CGAAAATTAGACGATCGAGCACAAACAGCGATGAAGAGCATCGATAGCCA
TGCCAAGGACTTTATGCGCAAGCTGGGCGAGAACGGGGCCATGAGCGAGG
ATGAGAGGAGGGAGCGCCAGGAGGATATCAAGGCACTGTTCGGAAAGGCC
AAGGAGTACAGCGACGACAAGGTGCAGCTGGCCATTCAGACCTACGAACT
AGTGGACAAGCAGATACGGCGACTGGACAACGATTTAGCACGCTTCGAGG
GTGAGATTCAGGAGAAGGCCTCATCCACGCGTGCCAAATCCGAGGAAGTG
GTGGCCAAGAAAGGTCGCAAAAAAACCAAGGACAGCAAGACGACGGGCAA
AAAGAAAAAGTCCGCATCCTCGGATGAGGAAACTGGGCGCGGCAACAACC
AATCTAACGCCAATTCCAGTGTCAATTCGAGCAGCAATGCCGGGCAAGGT
AGCAAAAAGAAAAAGTCCAAGGTAAATCAAGAAAAAGAAACTCGCAAGGG
GGGCGCTCAAAAGAAAACCGTCGAGGTTGATGACTCTGAGAAGGAATCGT
GCCACACGGCCGCCACTCATCCCAGCGACGTTATGGACATGCCCGTCGAT
CCCAATGAGCCCACATATTGCCTATGCCACCAGGTGTCCTATGGAGAGAT
GATTGGCTGCGACAATCCCGACTGTCCCATCGAGTGGTTTCACTTCGCTT
GTGTTGGCCTCACC

BS17774.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:31:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG9293-PA 858 CG9293-RA 1..798 17..814 3990 100 Plus
CG9293-PB 816 CG9293-RB 1..555 17..571 2775 100 Plus
CG9293-PB 816 CG9293-RB 553..756 611..814 1020 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:32:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG9293-RA 1044 CG9293-RA 100..897 17..814 3990 100 Plus
CG9293-RB 1002 CG9293-RB 100..654 17..571 2775 100 Plus
CG9293-RB 1002 CG9293-RB 652..855 611..814 1020 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:32:22
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13386757..13387114 410..53 1790 100 Minus
2L 23513712 2L 13386488..13386690 613..411 1015 100 Minus
2L 23513712 2L 13386099..13386259 772..612 805 100 Minus
2L 23513712 2L 13385995..13386036 814..773 210 100 Minus
2L 23513712 2L 13387176..13387213 54..17 190 100 Minus
Blast to na_te.dros performed on 2015-02-10 22:32:26 has no hits.

BS17774.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:32:01 Download gff for BS17774.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9293-PA 1..798 17..814 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 14:07:52 Download gff for BS17774.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9293-RA 92..897 9..814 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:13:22 Download gff for BS17774.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9293-RA 92..897 9..814 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:13:22 Download gff for BS17774.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 13386757..13387113 54..410 100 <- Minus
2L 13387177..13387221 9..53 91   Minus
2L 13385995..13386036 773..814 100 <- Minus
2L 13386099..13386257 614..772 100 <- Minus
2L 13386488..13386690 411..613 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 14:07:52 Download gff for BS17774.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13385995..13386036 773..814 100 <- Minus
arm_2L 13386099..13386257 614..772 100 <- Minus
arm_2L 13386488..13386690 411..613 100 <- Minus
arm_2L 13386757..13387113 54..410 100 <- Minus
arm_2L 13387177..13387221 9..53 91   Minus

BS17774.pep Sequence

Translation from 16 to 873

> BS17774.pep
MSSAIYLENYLDGLESLPTELERNFKLMRKLDDRAQTAMKSIDSHAKDFM
RKLGENGAMSEDERRERQEDIKALFGKAKEYSDDKVQLAIQTYELVDKQI
RRLDNDLARFEGEIQEKASSTRAKSEEVVAKKGRKKTKDSKTTGKKKKSA
SSDEETGRGNNQSNANSSVNSSSNAGQGSKKKKSKVNQEKETRKGGAQKK
TVEVDDSEKESCHTAATHPSDVMDMPVDPNEPTYCLCHQVSYGEMIGCDN
PDCPIEWFHFACVGLTTKPKGKWFCPKCTQDRKKK*

BS17774.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:03:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG9293-PA 285 CG9293-PA 1..285 1..285 1493 100 Plus
CG9293-PB 271 CG9293-PB 1..271 1..285 1397 95.1 Plus
CG7379-PA 433 CG7379-PA 223..408 112..282 294 36.3 Plus
Ing3-PA 686 CG6632-PA 624..681 228..285 256 63.8 Plus
Ing3-PA 686 CG6632-PA 2..176 5..186 199 30.2 Plus
MESR4-PD 2151 CG4903-PD 2092..2136 234..278 163 55.6 Plus