Clone BS17783 Report

Search the DGRC for BS17783

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:177
Well:83
Vector:pDNR-Dual
Associated Gene/TranscriptbetaTry-RA
Protein status:BS17783.pep: full length peptide match
Sequenced Size:794

Clone Sequence Records

BS17783.complete Sequence

794 bp assembled on 2010-02-09

GenBank Submission: KX805530

> BS17783.complete
GAAGTTATCAGTCGACATGCTGAAGTTCCTGATCCTGTTGTCGGCTGTAG
CCTGCGCCCTGGGAGGCACCATCCCCGAGGGTCTCCTGCCCCAGTTGGAT
GGCCGCATTGTCGGCGGTACTGCTACCACCATCAGCAGCTTCCCCTGGCA
GATCTCCCTGCAGCGCAGTGGCAGCCACTCCTGCGGTGGATCCATCTACT
CCGCCAGGGTGATCGTGACCGCCGCTCACTGCCTGCAGTCCGTGTCCGCC
TCCTCCCTGCAGATCCGCGCCGGATCCAGCTACTGGAGCTCTGGTGGCGT
CGTCGCCAAGGTTTCCTCTTTCAAGAACCACGAGGGTTACAACGCCAACA
CCATGGTCAACGACATCGCTGTGCTCCATCTGAGCTCCTCTCTGAGCTTC
AGCTCCACCATCAAGGCCATCGGTCTGGCTAGCTCCAACCCCGCCAACGG
TGCTGCTGCCTCCGTCTCCGGATGGGGTACCGAGTCCTCTGGCTCCAGCT
CCATTCCCTCCCAGCTGCGTTATGTCAACGTGAACATCGTCAGCCAGAGC
CGGTGCTCTTCTTCCTCCTATGGCTACGGAAACCAGATCAAGAGCTCCAT
GATCTGCGCTTTTGCCAGCGGCAAGGACTCGTGCCAGGGTGACTCCGGTG
GCCCACTGGTCTCCGGCGGAGTCCTCGTCGGTGTTGTCTCCTGGGGATAC
GGATGTGCTGCCGCTAACTACCCCGGTGTCTATGCCGATGTTGCTGCCCT
CCGCTCCTGGGTGATCAACAACGCCTAAAAGCTTTCTAGACCAT

BS17783.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:07:07
Subject Length Description Subject Range Query Range Score Percent Strand
betaTry-RB 762 CG18211-PB 1..762 17..778 3810 100 Plus
betaTry-RA 762 CG18211-PA 1..762 17..778 3810 100 Plus
CG30025-RA 762 CG30025-PA 1..762 17..778 2475 88.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:07:08
Subject Length Description Subject Range Query Range Score Percent Strand
betaTry-RB 1071 CG18211-RB 17..779 16..778 3815 100 Plus
betaTry-RA 813 CG18211-RA 17..779 16..778 3815 100 Plus
CG30025-RA 810 CG30025-RA 14..776 16..778 2480 88.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:07:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11346341..11347103 16..778 3815 100 Plus
2R 25286936 2R 11353598..11354360 778..16 2480 88.3 Minus
2R 25286936 2R 11355332..11356096 16..780 2430 87.8 Plus
2R 25286936 2R 11349094..11349856 778..16 2420 87.8 Minus
2R 25286936 2R 11350826..11351588 16..778 2420 87.8 Plus
2R 25286936 2R 11344346..11345093 763..16 2390 88 Minus
2R 25286936 2R 11345694..11346014 370..50 285 72.6 Minus
2R 25286936 2R 11345320..11345489 744..575 280 77.6 Minus
Blast to na_te.dros performed on 2014-11-28 03:07:06 has no hits.

BS17783.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:26:46 Download gff for BS17783.complete
Subject Subject Range Query Range Percent Splice Strand
betaTry-RA 1..762 17..778 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:15:12 Download gff for BS17783.complete
Subject Subject Range Query Range Percent Splice Strand
betaTry-RA 4..763 17..776 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:45 Download gff for BS17783.complete
Subject Subject Range Query Range Percent Splice Strand
betaTry-RA 8..767 17..776 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:26:46 Download gff for BS17783.complete
Subject Subject Range Query Range Percent Splice Strand
betaTry-RA 1..774 15..786 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:16 Download gff for BS17783.complete
Subject Subject Range Query Range Percent Splice Strand
betaTry-RA 18..777 17..776 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:16 Download gff for BS17783.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11346342..11347101 17..776 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:45 Download gff for BS17783.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7233847..7234606 17..776 100   Plus

BS17783.3prime Sequence

792 bp (740 high quality bases) assembled on 2007-05-29

> BS17783.3prime
ATGGTCTAGAAAGCTTTTAGGCGTTGTTGATCACCCAGGAGCGGAGGGCA
GCAACATCGGCATAGACACCGGGGTAGTTAGCGGCAGCACATCCGTATCC
CCAGGAGACAACACCGACGAGGACTCCGCCGGAGACCAGTGGGCCACCGG
AGTCACCCTGGCACGAGTCCTTGCCGCTGGCAAAAGCGCAGATCATGGAG
CTCTTGATCTGGTTTCCGTAGCCATAGGAGGAAGAAGAGCACCGGCTCTG
GCTGACGATGTTCACGTTGACATAACGCAGCTGGGAGGGAATGGAGCTGG
AGCCAGAGGACTCGGTACCCCATCCGGAGACGGAGGCAGCAGCACCGTTG
GCGGGGTTGGAGCTAGCCAGACCGATGGCCTTGATGGTGGAGCTGAAGCT
CAGAGAGGAGCTCAGATGGAGCACAGCGATGTCGTTGACCATGGTGTTGG
CGTTGTAACCCTCGTGGTTCTTGAAAGAGGAAACCTTGGCGACGACGCCA
CCAGAGCTCCAGTAGCTGGATCCGGCGCGGATCTGCAGGGAGGAGGCGGA
CACGGACTGCAGGCAGTGAGCGGCGGTCACGATCACCCTGGCGGAGTAGA
TGGATCCACCGCAGGAGTGGCTGCCACTGCGCTGCAGGGAGATCTGCCAG
GGGAAGCTGCTGATGGTGGTAGCAGTACCGCCGACAATGCGGCCATCCAA
CTGGGGCAGGAGACCCTCGGGGATGGTGCCTCCCAGGGCGCAGGCTACAG
CCGACAACAGGATCAGGAACTTCAGCATGTCGACTGATAACT

BS17783.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:33:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG18211-PA 762 betaTry-RA 1..762 778..17 3810 100 Minus
CG30025-PA 762 CG30025-RA 1..186 778..593 655 94 Minus
CG12351-PA 762 deltaTry-RA 1..186 778..593 655 94 Minus
CG30031-PA 762 CG30031-RA 1..186 778..593 655 94 Minus
CG30028-PA 762 gammaTry-RA 1..186 778..593 655 94 Minus
CG18444-PA 771 alphaTry-RA 36..185 743..594 600 96 Minus
CG18444-PA 771 alphaTry-RA 240..401 539..378 485 91.9 Minus
CG30025-PA 762 CG30025-RA 616..689 163..90 370 100 Minus
CG12351-PA 762 deltaTry-RA 616..689 163..90 370 100 Minus
CG30031-PA 762 CG30031-RA 616..689 163..90 370 100 Minus
CG30028-PA 762 gammaTry-RA 616..689 163..90 370 100 Minus
CG18444-PA 771 alphaTry-RA 616..689 163..90 370 100 Minus
CG30025-PA 762 CG30025-RA 381..461 398..318 355 97.5 Minus
CG12351-PA 762 deltaTry-RA 381..461 398..318 355 97.5 Minus
CG30031-PA 762 CG30031-RA 381..461 398..318 355 97.5 Minus
CG30028-PA 762 gammaTry-RA 381..461 398..318 355 97.5 Minus
CG30025-PA 762 CG30025-RA 700..762 79..17 315 100 Minus
CG30025-PA 762 CG30025-RA 196..275 583..504 250 92.5 Minus
CG12351-PA 762 deltaTry-RA 196..275 583..504 250 92.5 Minus
CG30031-PA 762 CG30031-RA 196..275 583..504 250 92.5 Minus
CG30028-PA 762 gammaTry-RA 196..275 583..504 250 92.5 Minus
CG12351-PA 762 deltaTry-RA 700..746 79..33 235 100 Minus
CG30031-PA 762 CG30031-RA 700..746 79..33 235 100 Minus
CG30028-PA 762 gammaTry-RA 700..746 79..33 235 100 Minus
CG30025-PA 762 CG30025-RA 298..350 481..429 215 96.2 Minus
CG12351-PA 762 deltaTry-RA 298..350 481..429 215 96.2 Minus
CG30031-PA 762 CG30031-RA 298..350 481..429 215 96.2 Minus
CG30028-PA 762 gammaTry-RA 298..350 481..429 215 96.2 Minus
CG18444-PA 771 alphaTry-RA 700..747 79..32 190 95.8 Minus
CG18444-PA 771 alphaTry-RA 199..233 580..546 150 97.1 Minus
CG18681-PA 771 epsilonTry-RA 616..650 163..129 150 97.1 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:46:02
Subject Length Description Subject Range Query Range Score Percent Strand
betaTry-RB 1071 CG18211-RB 17..779 779..17 3815 100 Minus
betaTry-RA 813 CG18211-RA 17..779 779..17 3815 100 Minus
CG30025-RA 810 CG30025-RA 14..776 779..17 2480 88.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:45:57
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11346341..11347103 779..17 3815 100 Minus
2R 25286936 2R 11353598..11354360 17..779 2480 88.3 Plus
2R 25286936 2R 11355332..11356096 779..15 2430 87.8 Minus
2R 25286936 2R 11349094..11349856 17..779 2420 87.8 Plus
2R 25286936 2R 11350826..11351588 779..17 2420 87.8 Minus
2R 25286936 2R 11344346..11345093 32..779 2390 88 Plus
2R 25286936 2R 11345694..11346014 425..745 285 72.6 Plus
2R 25286936 2R 11345320..11345489 51..220 280 77.6 Plus
Blast to na_te.dros performed on 2015-02-12 04:45:59 has no hits.

BS17783.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:33:09 Download gff for BS17783.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18211-PA 1..762 17..778 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:14:56 Download gff for BS17783.3prime
Subject Subject Range Query Range Percent Splice Strand
betaTry-RA 1..778 9..783 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:06:45 Download gff for BS17783.3prime
Subject Subject Range Query Range Percent Splice Strand
betaTry-RA 7..788 9..787 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:06:45 Download gff for BS17783.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 11346331..11347112 9..787 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:14:56 Download gff for BS17783.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7233836..7234617 9..787 99   Minus

BS17783.5prime Sequence

792 bp (755 high quality bases) assembled on 2007-05-29

> BS17783.5prime
GAAGTTATCAGTCGACATGCTGAAGTTCCTGATCCTGTTGTCGGCTGTAG
CCTGCGCCCTGGGAGGCACCATCCCCGAGGGTCTCCTGCCCCAGTTGGAT
GGCCGCATTGTCGGCGGTACTGCTACCACCATCAGCAGCTTCCCCTGGCA
GATCTCCCTGCAGCGCAGTGGCAGCCACTCCTGCGGTGGATCCATCTACT
CCGCCAGGGTGATCGTGACCGCCGCTCACTGCCTGCAGTCCGTGTCCGCC
TCCTCCCTGCAGATCCGCGCCGGATCCAGCTACTGGAGCTCTGGTGGCGT
CGTCGCCAAGGTTTCCTCTTTCAAGAACCACGAGGGTTACAACGCCAACA
CCATGGTCAACGACATCGCTGTGCTCCATCTGAGCTCCTCTCTGAGCTTC
AGCTCCACCATCAAGGCCATCGGTCTGGCTAGCTCCAACCCCGCCAACGG
TGCTGCTGCCTCCGTCTCCGGATGGGGTACCGAGTCCTCTGGCTCCAGCT
CCATTCCCTCCCAGCTGCGTTATGTCAACGTGAACATCGTCAGCCAGAGC
CGGTGCTCTTCTTCCTCCTATGGCTACGGAAACCAGATCAAGAGCTCCAT
GATCTGCGCTTTTGCCAGCGGCAAGGACTCGTGCCAGGGTGACTCCGGTG
GCCCACTGGTCTCCGGCGGAGTCCTCGTCGGTGTTGTCTCCTGNGGATAC
GGATGTGCTGCCGCTAACTACCCCGGTGTCTATGCCGATGTTGCTGCCCT
CCGCTCCTGGGTGATCAACAACGCCTAAAAGCTTTCTAGACC

BS17783.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:33:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG18211-PA 762 betaTry-RA 1..762 17..778 3791 99.8 Plus
CG30025-PA 762 CG30025-RA 1..186 17..202 655 94 Plus
CG12351-PA 762 deltaTry-RA 1..186 17..202 655 94 Plus
CG30031-PA 762 CG30031-RA 1..186 17..202 655 94 Plus
CG30028-PA 762 gammaTry-RA 1..186 17..202 655 94 Plus
CG18444-PA 771 alphaTry-RA 36..185 52..201 600 96 Plus
CG18444-PA 771 alphaTry-RA 240..401 256..417 485 91.9 Plus
CG30025-PA 762 CG30025-RA 381..461 397..477 355 97.5 Plus
CG12351-PA 762 deltaTry-RA 381..461 397..477 355 97.5 Plus
CG30031-PA 762 CG30031-RA 381..461 397..477 355 97.5 Plus
CG30028-PA 762 gammaTry-RA 381..461 397..477 355 97.5 Plus
CG30025-PA 762 CG30025-RA 616..689 632..705 351 98.6 Plus
CG12351-PA 762 deltaTry-RA 616..689 632..705 351 98.6 Plus
CG30031-PA 762 CG30031-RA 616..689 632..705 351 98.6 Plus
CG30028-PA 762 gammaTry-RA 616..689 632..705 351 98.6 Plus
CG18444-PA 771 alphaTry-RA 616..689 632..705 351 98.6 Plus
CG30025-PA 762 CG30025-RA 700..762 716..778 315 100 Plus
CG30025-PA 762 CG30025-RA 196..275 212..291 250 92.5 Plus
CG12351-PA 762 deltaTry-RA 196..275 212..291 250 92.5 Plus
CG30031-PA 762 CG30031-RA 196..275 212..291 250 92.5 Plus
CG30028-PA 762 gammaTry-RA 196..275 212..291 250 92.5 Plus
CG12351-PA 762 deltaTry-RA 700..746 716..762 235 100 Plus
CG30031-PA 762 CG30031-RA 700..746 716..762 235 100 Plus
CG30028-PA 762 gammaTry-RA 700..746 716..762 235 100 Plus
CG30025-PA 762 CG30025-RA 298..350 314..366 215 96.2 Plus
CG12351-PA 762 deltaTry-RA 298..350 314..366 215 96.2 Plus
CG30031-PA 762 CG30031-RA 298..350 314..366 215 96.2 Plus
CG30028-PA 762 gammaTry-RA 298..350 314..366 215 96.2 Plus
CG18444-PA 771 alphaTry-RA 700..747 716..763 190 95.8 Plus
CG18444-PA 771 alphaTry-RA 199..233 215..249 150 97.1 Plus
CG18681-PA 771 epsilonTry-RA 616..650 632..666 150 97.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:00:56
Subject Length Description Subject Range Query Range Score Percent Strand
betaTry-RB 1071 CG18211-RB 17..779 16..778 3804 99.9 Plus
betaTry-RA 813 CG18211-RA 17..779 16..778 3804 99.9 Plus
CG30025-RA 810 CG30025-RA 14..776 16..778 2469 88.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:00:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11346341..11347103 16..778 3804 99.9 Plus
2R 25286936 2R 11353598..11354360 778..16 2469 88.2 Minus
2R 25286936 2R 11355332..11356096 16..780 2419 87.7 Plus
2R 25286936 2R 11350826..11351588 16..778 2409 87.7 Plus
2R 25286936 2R 11349094..11349856 778..16 2409 87.7 Minus
2R 25286936 2R 11344346..11345093 763..16 2379 87.8 Minus
2R 25286936 2R 11345694..11346014 370..50 285 72.6 Minus
2R 25286936 2R 11345320..11345489 744..575 269 77.1 Minus
Blast to na_te.dros performed on 2015-02-12 00:00:51 has no hits.

BS17783.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:33:15 Download gff for BS17783.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18211-PA 1..762 17..778 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 03:43:29 Download gff for BS17783.5prime
Subject Subject Range Query Range Percent Splice Strand
betaTry-RA 1..778 12..786 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:54:55 Download gff for BS17783.5prime
Subject Subject Range Query Range Percent Splice Strand
betaTry-RA 7..788 8..786 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:54:55 Download gff for BS17783.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 11346331..11347112 8..786 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 03:43:29 Download gff for BS17783.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7233836..7234617 8..786 98   Plus

BS17783.pep Sequence

Translation from 16 to 777

> BS17783.pep
MLKFLILLSAVACALGGTIPEGLLPQLDGRIVGGTATTISSFPWQISLQR
SGSHSCGGSIYSARVIVTAAHCLQSVSASSLQIRAGSSYWSSGGVVAKVS
SFKNHEGYNANTMVNDIAVLHLSSSLSFSSTIKAIGLASSNPANGAAASV
SGWGTESSGSSSIPSQLRYVNVNIVSQSRCSSSSYGYGNQIKSSMICAFA
SGKDSCQGDSGGPLVSGGVLVGVVSWGYGCAAANYPGVYADVAALRSWVI
NNA*

BS17783.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:03:13
Subject Length Description Subject Range Query Range Score Percent Strand
betaTry-PB 253 CG18211-PB 1..253 1..253 1286 100 Plus
betaTry-PA 253 CG18211-PA 1..253 1..253 1286 100 Plus
CG30025-PA 253 CG30025-PA 1..253 1..253 1163 88.1 Plus
gammaTry-PA 253 CG30028-PA 1..253 1..253 1158 87.7 Plus
deltaTry-PA 253 CG12351-PA 1..253 1..253 1158 87.7 Plus