Clone BS17791 Report

Search the DGRC for BS17791

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:177
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptGs2-RB
Protein status:BS17791.pep: full length peptide match
Sequenced Size:1142

Clone Sequence Records

BS17791.complete Sequence

1142 bp assembled on 2010-02-09

GenBank Submission: KX806334

> BS17791.complete
GAAGTTATCAGTCGACATGCATTCCGCGATCCTGGAGGACTCGCCCAACG
CGCGCATCAACAAGACGATCCTCGATCGCTATCTTTCACTGCCGCTGCAG
GAGAACATCGTTCAGGCCACCTACGTGTGGATCGATGGCACCGGCGAGGA
TTTGCGCTGCAAGGATCGCACCCTCGACTTCATTCCCCAGAGTCCCAAGG
AGCTACCCGTTTGGAACTACGATGGAAGCTCGTGCTACCAGGCCGAGGGA
TCCAACTCGGACACCTACCTGTATCCGGTGGCCATCTACAAGGACCCGTT
CCGGCGCGGCAACAACATCCTGGTGATGTGCGACACCTACAAGTTCGACG
GCACCCCCACGGACACCAACAAGCGCAAGACCTGCCTGGAGGTGGCCAAC
AAGTGCGCCGCAGAGGAGCCCTGGTTCGGTATTGAGCAGGAGTACACCTT
CCTCGACTTTGATGGCCATCCATTGGGCTGGCCCAAGAACGGTTTCCCCG
GACCCCAGGGACCCTACTATTGCGGCGTTGGTGCCAACAAGGTCTACGCC
CGCGACATTGTGGATGCCCACTATCGCGCCTGTCTGTACGCCGGCATCAA
GGTGTCCGGCACCAATGCCGAGGTGATGCCCGCCCAGTGGGAGTTCCAGG
TGGGACCCTGCGAGGGCATCTCCATTGGTGATGATCTCTGGATGGCCCGT
TTCCTCTTGCATCGCATCTCCGAGGAGTTTGGCATTGTGTCCACTCTGGA
TCCCAAGCCGATGCCTGGCGATTGGAACGGTGCTGGTGCCCACACCAATG
TGTCGACGAAGGCAATGCGCGAAGATGGCGGCATTCGGGACATTGAGAAG
GCGGTGGCCAAGCTGTCCAAGTGCCACGAGAGGCACATTCGCGCCTACGA
TCCCAAGCAGGGACAGGACAATGCCCGTCGTCTGACCGGAAAGCACGAGA
CGAGCTCCATCAACGATTTCAGTGCCGGCGTGGCCAATCGCGGATGCAGC
ATACGCATTCCTCGCGGCGTCAATGATGATGGCAAGGGCTATTTCGAGGA
TCGCCGCCCCAGCTCCAACTGCGATCCCTACTCCGTGGTGGAGGCCATCT
TGCGCACCATCTGCCTGGACGAATAGAAGCTTTCTAGACCAT

BS17791.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:07:21
Subject Length Description Subject Range Query Range Score Percent Strand
Gs2-RB 1110 CG1743-PB 1..1110 17..1126 5550 100 Plus
Gs2-RF 1110 CG1743-PF 12..1110 28..1126 5495 100 Plus
Gs2-RE 1110 CG1743-PE 12..1110 28..1126 5495 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:07:22
Subject Length Description Subject Range Query Range Score Percent Strand
Gs2-RB 1906 CG1743-RB 231..1340 17..1126 5550 100 Plus
Gs2-RF 1990 CG1743-RF 326..1424 28..1126 5495 100 Plus
Gs2-RE 1829 CG1743-RE 165..1263 28..1126 5495 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:07:19
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11429239..11429631 734..1126 1965 100 Plus
X 23542271 X 11428528..11428871 200..543 1720 100 Plus
X 23542271 X 11428980..11429173 540..733 970 100 Plus
X 23542271 X 11424282..11424454 28..200 865 100 Plus
2L 23513712 2L 132973..133207 414..648 380 77.4 Plus
Blast to na_te.dros performed on 2014-11-28 03:07:20 has no hits.

BS17791.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:26:48 Download gff for BS17791.complete
Subject Subject Range Query Range Percent Splice Strand
Gs2-RB 1..1110 17..1126 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:15:14 Download gff for BS17791.complete
Subject Subject Range Query Range Percent Splice Strand
Gs2-RB 208..1317 17..1126 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:52 Download gff for BS17791.complete
Subject Subject Range Query Range Percent Splice Strand
Gs2-RB 231..1340 17..1126 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:26:49 Download gff for BS17791.complete
Subject Subject Range Query Range Percent Splice Strand
Gs2-RB 201..1317 9..1126 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:21 Download gff for BS17791.complete
Subject Subject Range Query Range Percent Splice Strand
Gs2-RB 231..1340 17..1126 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:21 Download gff for BS17791.complete
Subject Subject Range Query Range Percent Splice Strand
X 11424282..11424454 28..200 100 -> Plus
X 11428529..11428869 201..541 100 -> Plus
X 11428982..11429173 542..733 100 -> Plus
X 11429239..11429631 734..1126 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:52 Download gff for BS17791.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11322562..11322902 201..541 100 -> Plus
arm_X 11318315..11318487 28..200 100 -> Plus
arm_X 11323015..11323206 542..733 100 -> Plus
arm_X 11323272..11323664 734..1126 100   Plus

BS17791.3prime Sequence

818 bp (691 high quality bases) assembled on 2007-05-29

> BS17791.3prime
ATGGTCTAGAAAGCTTCTATTCGTCCAGGCAGATGGTGCGCAAGATGGCC
TCCACCACGGAGTAGGGATCGCAGTTGGAGCTGGGGCGGCGATCCTCGAA
ATAGCCCTTGCCATCATCATTGACGCCGCGAGGAATGCGTATGCTGCATC
CGCGATTGGCCACGCCGGCACTGAAATCGTTGATGGAGCTCGTCTCGTGC
TTTCCGGTCAGACGACGGGCATTGTCCTGTCCCTGCTTGGGATCGTAGGC
GCGAATGTGCCTCTCGTGGCACTTGGACAGCTTGGCCACCGCCTTCTCAA
TGTCCCGAATGCCGCCATCTTCGCGCATTGCCTTCGTCGACACATTGGTG
TGGGCACCAGCACCGTTCCAATCGCCAGGCATCGGCTTGGGATCCAGAGT
GGACACAATGCCAAACTCCTCGGAGATGCGATGCAAGAGGAAACGGGCCA
TCCAGAGATCATCACCAATGGAGATGCCCTCGCAGGGTCCCACCTGGAAC
TCCCACTGGGCGGGCATCACCTCGGCATTGGTGCCGGACACCTTGATGCC
GGCGTACAGACAGGCGCGATAGTGGGCATCCACAATGTCGCGGGCGTAGA
CCTTGTTGGCACCAACGCCGCAATAGTAGGGTCCCTGGGGTCCGGGGAAA
CCGTTCTTGGGCCAGCCCAATGGATGGCCATCAAAGTCGAGGAAGGTGTA
CTCCTGCTCAATACCGAACCAGGGCTCCTCTGCGGCGCACTTGTTGGCCA
CCTCCAGGCAGGTCTTGCGCTTGTTGGTGTCCGTGGGGGTGCCGTCGAAC
TTGTAGGTGTCGCACATC

BS17791.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:34:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG1743-PB 1110 Gs2-RB 309..1110 818..17 4010 100 Minus
CG1743-PC 1110 Gs2-RC 309..1110 818..17 4010 100 Minus
CG1743-PA 801 Gs2-RA 1..801 817..17 4005 100 Minus
CG2718-PC 1200 Gs1-RC 683..725 537..495 165 95.3 Minus
CG2718-PB 1200 Gs1-RB 683..725 537..495 165 95.3 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:47:04
Subject Length Description Subject Range Query Range Score Percent Strand
Gs2-RF 1990 CG1743-RF 623..1424 818..17 4010 100 Minus
Gs2-RE 1829 CG1743-RE 462..1263 818..17 4010 100 Minus
Gs2-RD 1918 CG1743-RD 551..1352 818..17 4010 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:46:57
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11429239..11429631 409..17 1965 100 Minus
X 23542271 X 11428653..11428871 818..600 1095 100 Minus
X 23542271 X 11428980..11429173 603..410 970 100 Minus
2L 23513712 2L 132973..133207 729..495 380 77.4 Minus
Blast to na_te.dros performed on 2015-02-12 23:47:02 has no hits.

BS17791.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:34:21 Download gff for BS17791.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1743-PC 309..1110 17..818 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:21:46 Download gff for BS17791.3prime
Subject Subject Range Query Range Percent Splice Strand
Gs2-RD 551..1352 17..818 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:23:40 Download gff for BS17791.3prime
Subject Subject Range Query Range Percent Splice Strand
Gs2-RD 551..1352 17..818 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:23:40 Download gff for BS17791.3prime
Subject Subject Range Query Range Percent Splice Strand
X 11428653..11428869 602..818 100 -> Minus
X 11428982..11429173 410..601 100 -> Minus
X 11429239..11429631 17..409 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:21:46 Download gff for BS17791.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11322686..11322902 602..818 100 -> Minus
arm_X 11323015..11323206 410..601 100 -> Minus
arm_X 11323272..11323664 17..409 100   Minus

BS17791.5prime Sequence

787 bp (754 high quality bases) assembled on 2007-05-29

> BS17791.5prime
GAAGTTATCAGTCGACATGCATTCCGCGATCCTGGAGGACTCGCCCAACG
CGCGCATCAACAAGACGATCCTCGATCGCTATCTTTCACTGCCGCTGCAG
GAGAACATCGTTCAGGCCACCTACGTGTGGATCGATGGCACCGGCGAGGA
TTTGCGCTGCAAGGATCGCACCCTCGACTTCATTCCCCAGAGTCCCAAGG
AGCTACCCGTTTGGAACTACGATGGAAGCTCGTGCTACCAGGCCGAGGGA
TCCAACTCGGACACCTACCTGTATCCGGTGGCCATCTACAAGGACCCGTT
CCGGCGCGGCAACAACATCCTGGTGATGTGCGACACCTACAAGTTCGACG
GCACCCCCACGGACACCAACAAGCGCAAGACCTGCCTGGAGGTGGCCAAC
AAGTGCGCCGCAGAGGAGCCCTGGTTCGGTATTGAGCAGGAGTACACCTT
CCTCGACTTTGATGGCCATCCATTGGGCTGGCCCAAGAACGGTTTCCCCG
GACCCCAGGGACCCTACTATTGCGGCGTTGGTGCCAACAAGGTCTACGCC
CGCGACATTGTGGATGCCCACTATCGCGCCTGTCTGTACGCCGGCATCAA
GGTGTCCGGCACCAATGCCGAGGTGATGCCCGCCCAGTGGGAGTTCCAGG
TGGGACCCTGCGAGGGCATCTCCATTGGTGATGATCTCTGGATGGCCCGT
TTCCTCTTGCATCGCATCTCCGAGGAGTTTGGCATTGTGTCCACTCTGGA
TCCCAAGCCGATGCCTGGCGATTGGAACGGTGCTGGT

BS17791.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:34:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG1743-PB 1110 Gs2-RB 1..771 17..787 3855 100 Plus
CG1743-PC 1110 Gs2-RC 12..771 28..787 3800 100 Plus
CG1743-PA 801 Gs2-RA 1..462 326..787 2310 100 Plus
CG2718-PC 1200 Gs1-RC 683..725 606..648 165 95.3 Plus
CG2718-PB 1200 Gs1-RB 683..725 606..648 165 95.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:44:26
Subject Length Description Subject Range Query Range Score Percent Strand
Gs2-RB 1906 CG1743-RB 231..1001 17..787 3855 100 Plus
Gs2-RF 1990 CG1743-RF 326..1085 28..787 3800 100 Plus
Gs2-RE 1829 CG1743-RE 165..924 28..787 3800 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:44:22
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11428528..11428871 200..543 1720 100 Plus
X 23542271 X 11428980..11429173 540..733 970 100 Plus
X 23542271 X 11424282..11424454 28..200 865 100 Plus
2L 23513712 2L 132973..133207 414..648 380 77.4 Plus
X 23542271 X 11429239..11429292 734..787 270 100 Plus
Blast to na_te.dros performed on 2015-02-13 15:44:24 has no hits.

BS17791.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:34:26 Download gff for BS17791.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1743-PB 1..771 17..787 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 13:57:04 Download gff for BS17791.5prime
Subject Subject Range Query Range Percent Splice Strand
Gs2-RB 224..1001 9..787 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:21:22 Download gff for BS17791.5prime
Subject Subject Range Query Range Percent Splice Strand
Gs2-RB 224..1001 9..787 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:21:22 Download gff for BS17791.5prime
Subject Subject Range Query Range Percent Splice Strand
X 11424282..11424454 28..200 100 -> Plus
X 11428529..11428869 201..541 100 -> Plus
X 11428982..11429173 542..733 100 -> Plus
X 11429239..11429292 734..787 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 13:57:04 Download gff for BS17791.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11318315..11318487 28..200 100 -> Plus
arm_X 11322562..11322902 201..541 100 -> Plus
arm_X 11323015..11323206 542..733 100 -> Plus
arm_X 11323272..11323325 734..787 100   Plus

BS17791.pep Sequence

Translation from 16 to 1125

> BS17791.pep
MHSAILEDSPNARINKTILDRYLSLPLQENIVQATYVWIDGTGEDLRCKD
RTLDFIPQSPKELPVWNYDGSSCYQAEGSNSDTYLYPVAIYKDPFRRGNN
ILVMCDTYKFDGTPTDTNKRKTCLEVANKCAAEEPWFGIEQEYTFLDFDG
HPLGWPKNGFPGPQGPYYCGVGANKVYARDIVDAHYRACLYAGIKVSGTN
AEVMPAQWEFQVGPCEGISIGDDLWMARFLLHRISEEFGIVSTLDPKPMP
GDWNGAGAHTNVSTKAMREDGGIRDIEKAVAKLSKCHERHIRAYDPKQGQ
DNARRLTGKHETSSINDFSAGVANRGCSIRIPRGVNDDGKGYFEDRRPSS
NCDPYSVVEAILRTICLDE*

BS17791.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:03:15
Subject Length Description Subject Range Query Range Score Percent Strand
Gs2-PB 369 CG1743-PB 1..369 1..369 2021 100 Plus
Gs2-PD 373 CG1743-PD 1..373 1..369 2006 98.9 Plus
Gs2-PF 369 CG1743-PF 1..369 1..369 2004 99.2 Plus
Gs2-PE 369 CG1743-PE 1..369 1..369 2004 99.2 Plus
Gs2-PC 369 CG1743-PC 1..369 1..369 2004 99.2 Plus