Clone Sequence Records
BS17795.3prime Sequence
756 bp (602 high quality bases) assembled on 2007-05-29
> BS17795.3prime
ATGGTCTAGAAAGCTTTCAGGAGCGGTAGTACGGCATGTGTGGTTGCACG
TAGTTGTAGATCAGGGGTCGCCGGGCGGGAGTGGTCTTCGCCATCCACGA
GTCCTCACGTTTGATCTTGTGTCCCAGTCCACCCAGACCACCCAAGGCGG
CGAGCACCTGTGTGTTATTGCTGCCGTCGCTGGACACCTGGGCGGAGTGC
AGGTGGCTCTCGGCGCTCAGACTCTCCAGTCCCGGATGTCCGGGATGTCC
TGGCAGCTGGCCGCCTCCGGCCATCGCCAGGTGGTGCAGCGATGACGGGT
ACATTTCCGGCGATATTTCCGCTCCATGAAGCGGATAGTCCATGCCGTAC
GGCATCATGTACGGCGTCTGTTCCGGGAACTGGTACATCATCTTTTCGCT
GGCGTTGTCCATGAGCTTCTTGATCAACACTATTGCGGCTACCACGAAGG
CAATTTTGGACAGGATCAGAGCCTTGAGAGTCAGGAGCCCCACCGCCTTT
GCGGCCACCATCGTCCACCCGAATGTTGTGGCCGCCAGGTACATGGGTAT
GAACATCTGGAACTGCTTCTTGTCCTGGTGCTGGTGCCGCCTCCGTCCGC
CCAGAAGACCGCCTCCGCCGCCATTGTCACCACCTCCGCCGCCCAGCAGG
CCTCCTCCACCGCCACCATTTCCTCCCAGGCCACCTCCACCGCCCAGTAG
TCCTCCTCCATTGACCTGCAGGCGGCCTGTGCTGCTGGAGGTCTTTTTCA
GCAGTG
BS17795.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:35:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10303-PA | 1182 | Osi4-RA | 443..1182 | 756..17 | 3700 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-05 13:54:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi4-RA | 1516 | CG10303-RA | 562..1301 | 756..17 | 3700 | 100 | Minus |
Osi4-RB | 1522 | CG10303-RB | 562..1307 | 756..17 | 3630 | 99.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-05 13:54:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6220219..6220557 | 392..730 | 1695 | 100 | Plus |
3R | 32079331 | 3R | 6219622..6219933 | 85..396 | 1545 | 99.7 | Plus |
3R | 32079331 | 3R | 6218533..6218600 | 17..84 | 340 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-05 13:54:47 has no hits.
BS17795.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:35:04 Download gff for
BS17795.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10303-PA | 443..1182 | 17..756 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 22:10:17 Download gff for
BS17795.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi4-RA | 562..1304 | 13..756 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 16:15:40 Download gff for
BS17795.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi4-RA | 562..1304 | 13..756 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 16:15:40 Download gff for
BS17795.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6218530..6218600 | 13..84 | 97 | <- | Plus |
3R | 6219622..6219929 | 85..392 | 100 | <- | Plus |
3R | 6220220..6220553 | 393..726 | 100 | <- | Plus |
3R | 6221191..6221220 | 727..756 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 22:10:17 Download gff for
BS17795.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2044252..2044322 | 13..84 | 97 | <- | Plus |
arm_3R | 2045344..2045651 | 85..392 | 100 | <- | Plus |
arm_3R | 2045942..2046275 | 393..726 | 100 | <- | Plus |
arm_3R | 2046913..2046942 | 727..756 | 100 | | Plus |
BS17795.5prime Sequence
828 bp (806 high quality bases) assembled on 2007-05-29
> BS17795.5prime
GAAGTTATCAGTCGACATGCCCAGGCATTTAGTTGCCAGCTGCCTTCTGC
TGGCTTTGGGTCTGAACATGAGCCTGGCGGCGATTCACAAGCGCAGTGGT
GCGAATTCGTTGGGAGTGGATCCCGAGGGCAAGCCTGCGGCGAATCCTGC
GGTCAGTGTGGAGAACACTGACCTGCTGGACAAGCTGAGCTGGAAGTGCG
CAAACAACGCGAGTTGCCTGTACGGGGTGGCCAATGGTCTCATGGCCTCC
TACCGTCGTGGTGAAACCCTCAAGCTGGGGCTTTTCGACCTGGTCAAGTT
GCCCGAACTAGATGCTTCTCGGAAGCACAAGTGGGGCACTGGGCGCGGTC
TCTCCGGCTTTATGGACTTTGTGACGGAAAACGCCATCAGGGTGCCCGTG
GGCCCCATGGTCTTCAGTGTTCAGCGAGCCGAGGACGACAGCGATTATAT
CGAGGTAGCACTGCTGAAAAAGACCTCCAGCAGCACAGGCCGCCTGCAGG
TCAATGGAGGAGGACTACTGGGCGGTGGAGGTGGCCTGGGAGGAAATGGT
GGCGGTGGAGGAGGCCTGCTGGGCGGCGGAGGTGGTGACAATGGCGGCGG
AGGCGGTCTTCTGGGCGGACGGAGGCGGCACCAGCACCAGGACAAGAAGC
AGTTCCAGATGTTCATACCCATGTACCTGGCGGCCACAACATTCGGGTGG
ACGATGGTGGCCGCAAAGGCGGTGGGGCTCCTGACTCTCAAGGCTCTGAT
CCTGTCCAAAATTGCCTTCGTGGTAGCCGCAATAGTGTTGATCAAGAAGC
TCATGGACAACGCCAGCGAAAAGATGAT
BS17795.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:35:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10303-PA | 1182 | Osi4-RA | 1..812 | 17..828 | 4060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:26:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi4-RB | 1522 | CG10303-RB | 120..931 | 17..828 | 4060 | 100 | Plus |
Osi4-RA | 1516 | CG10303-RA | 120..931 | 17..828 | 4060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:26:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6221190..6221662 | 489..17 | 2365 | 100 | Minus |
3R | 32079331 | 3R | 6220219..6220557 | 823..485 | 1695 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:26:49 has no hits.
BS17795.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:35:09 Download gff for
BS17795.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10303-PA | 1..812 | 17..828 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 16:40:05 Download gff for
BS17795.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi4-RA | 120..931 | 17..828 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:33:54 Download gff for
BS17795.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi4-RA | 120..931 | 17..828 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:33:54 Download gff for
BS17795.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6220214..6220553 | 489..828 | 99 | <- | Minus |
3R | 6221191..6221662 | 17..488 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 16:40:05 Download gff for
BS17795.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2045936..2046275 | 489..828 | 99 | <- | Minus |
arm_3R | 2046913..2047384 | 17..488 | 100 | | Minus |
BS17795.complete Sequence
1214 bp assembled on 2009-12-07
GenBank Submission: KX800468
> BS17795.complete
GAAGTTATCAGTCGACATGCCCAGGCATTTAGTTGCCAGCTGCCTTCTGC
TGGCTTTGGGTCTGAACATGAGCCTGGCGGCGATTCACAAGCGCAGTGGT
GCGAATTCGTTGGGAGTGGATCCCGAGGGCAAGCCTGCGGCGAATCCTGC
GGTCAGTGTGGAGAACACTGACCTGCTGGACAAGCTGAGCTGGAAGTGCG
CAAACAACGCGAGTTGCCTGTACGGGGTGGCCAATGGTCTCATGGCCTCC
TACCGTCGTGGTGAAACCCTCAAGCTGGGGCTTTTCGACCTGGTCAAGTT
GCCCGAACTAGATGCTTCTCGGAAGCACAAGTGGGGCACTGGGCGCGGTC
TCTCCGGCTTTATGGACTTTGTGACGGAAAACGCCATCAGGGTGCCCGTG
GGCCCCATGGTCTTCAGTGTTCAGCGAGCCGAGGACGACAGCGATTATAT
CGAGGTAGCACTGCTGAAAAAGACCTCCAGCAGCACAGGCCGCCTGCAGG
TCAATGGAGGAGGACTACTGGGCGGTGGAGGTGGCCTGGGAGGAAATGGT
GGCGGTGGAGGAGGCCTGCTGGGCGGCGGAGGTGGTGACAATGGCGGCGG
AGGCGGTCTTCTGGGCGGACGGAGGCGGCACCAGCACCAGGACAAGAAGC
AGTTCCAGATGTTCATACCCATGTACCTGGCGGCCACAACATTCGGGTGG
ACGATGGTGGCCGCAAAGGCGGTGGGGCTCCTGACTCTCAAGGCTCTGAT
CCTGTCCAAAATTGCCTTCGTGGTAGCCGCAATAGTGTTGATCAAGAAGC
TCATGGACAACGCCAGCGAAAAGATGATGTACCAGTTCCCGGAACAGACG
CCGTACATGATGCCGTACGGCATGGACTATCCGCTTCATGGAGCGGAAAT
ATCGCCGGAAATGTACCCGTCATCGCTGCACCACCTGGCGATGGCCGGAG
GCGGCCAGCTGCCAGGACATCCCGGACATCCGGGACTGGAGAGTCTGAGC
GCCGAGAGCCACCTGCACTCCGCCCAGGTGTCCAGCGACGGCAGCAATAA
CACACAGGTGCTCGCCGCCTTGGGTGGTCTGGGTGGACTGGGACACAAGA
TCAAACGTGAGGACTCGTGGATGGCGAAGACCACTCCCGCCCGGCGACCC
CTGATCTACAACTACGTGCAACCACACATGCCGTACTACCGCTCCTGAAA
GCTTTCTAGACCAT
BS17795.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:46:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi4-RA | 1182 | CG10303-PA | 1..1182 | 17..1198 | 5910 | 100 | Plus |
Osi4-RB | 1188 | CG10303-PB | 1..1188 | 17..1198 | 5815 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:46:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi4-RA | 1516 | CG10303-RA | 120..1301 | 17..1198 | 5910 | 100 | Plus |
Osi4-RB | 1522 | CG10303-RB | 120..1307 | 17..1198 | 5815 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:46:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6221190..6221662 | 489..17 | 2365 | 100 | Minus |
3R | 32079331 | 3R | 6220219..6220557 | 823..485 | 1695 | 100 | Minus |
3R | 32079331 | 3R | 6219622..6219933 | 1130..819 | 1545 | 99.7 | Minus |
3R | 32079331 | 3R | 6218533..6218600 | 1198..1131 | 340 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:46:50 has no hits.
BS17795.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:26:38 Download gff for
BS17795.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi4-RA | 1..1182 | 17..1198 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:39:32 Download gff for
BS17795.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi4-RA | 120..1300 | 17..1197 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:57:30 Download gff for
BS17795.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi4-RA | 120..1300 | 17..1197 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:26:38 Download gff for
BS17795.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi4-RA | 120..1304 | 17..1202 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:56:38 Download gff for
BS17795.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi4-RA | 120..1300 | 17..1197 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:56:38 Download gff for
BS17795.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6218534..6218600 | 1131..1197 | 100 | <- | Minus |
3R | 6219622..6219929 | 823..1130 | 100 | <- | Minus |
3R | 6220220..6220553 | 489..822 | 100 | <- | Minus |
3R | 6221191..6221662 | 17..488 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:57:30 Download gff for
BS17795.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2044256..2044322 | 1131..1197 | 100 | <- | Minus |
arm_3R | 2045344..2045651 | 823..1130 | 100 | <- | Minus |
arm_3R | 2045942..2046275 | 489..822 | 100 | <- | Minus |
arm_3R | 2046913..2047384 | 17..488 | 100 | | Minus |
BS17795.pep Sequence
Translation from 16 to 1197
> BS17795.pep
MPRHLVASCLLLALGLNMSLAAIHKRSGANSLGVDPEGKPAANPAVSVEN
TDLLDKLSWKCANNASCLYGVANGLMASYRRGETLKLGLFDLVKLPELDA
SRKHKWGTGRGLSGFMDFVTENAIRVPVGPMVFSVQRAEDDSDYIEVALL
KKTSSSTGRLQVNGGGLLGGGGGLGGNGGGGGGLLGGGGGDNGGGGGLLG
GRRRHQHQDKKQFQMFIPMYLAATTFGWTMVAAKAVGLLTLKALILSKIA
FVVAAIVLIKKLMDNASEKMMYQFPEQTPYMMPYGMDYPLHGAEISPEMY
PSSLHHLAMAGGGQLPGHPGHPGLESLSAESHLHSAQVSSDGSNNTQVLA
ALGGLGGLGHKIKREDSWMAKTTPARRPLIYNYVQPHMPYYRS*
BS17795.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:56:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi4-PA | 393 | CG10303-PA | 1..393 | 1..393 | 2062 | 100 | Plus |
Osi4-PB | 395 | CG10303-PB | 1..395 | 1..393 | 2045 | 99.2 | Plus |