Clone BS17795 Report

Search the DGRC for BS17795

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:177
Well:95
Vector:pDNR-Dual
Associated Gene/TranscriptOsi4-RA
Protein status:BS17795.pep: full length peptide match
Sequenced Size:1214

Clone Sequence Records

BS17795.3prime Sequence

756 bp (602 high quality bases) assembled on 2007-05-29

> BS17795.3prime
ATGGTCTAGAAAGCTTTCAGGAGCGGTAGTACGGCATGTGTGGTTGCACG
TAGTTGTAGATCAGGGGTCGCCGGGCGGGAGTGGTCTTCGCCATCCACGA
GTCCTCACGTTTGATCTTGTGTCCCAGTCCACCCAGACCACCCAAGGCGG
CGAGCACCTGTGTGTTATTGCTGCCGTCGCTGGACACCTGGGCGGAGTGC
AGGTGGCTCTCGGCGCTCAGACTCTCCAGTCCCGGATGTCCGGGATGTCC
TGGCAGCTGGCCGCCTCCGGCCATCGCCAGGTGGTGCAGCGATGACGGGT
ACATTTCCGGCGATATTTCCGCTCCATGAAGCGGATAGTCCATGCCGTAC
GGCATCATGTACGGCGTCTGTTCCGGGAACTGGTACATCATCTTTTCGCT
GGCGTTGTCCATGAGCTTCTTGATCAACACTATTGCGGCTACCACGAAGG
CAATTTTGGACAGGATCAGAGCCTTGAGAGTCAGGAGCCCCACCGCCTTT
GCGGCCACCATCGTCCACCCGAATGTTGTGGCCGCCAGGTACATGGGTAT
GAACATCTGGAACTGCTTCTTGTCCTGGTGCTGGTGCCGCCTCCGTCCGC
CCAGAAGACCGCCTCCGCCGCCATTGTCACCACCTCCGCCGCCCAGCAGG
CCTCCTCCACCGCCACCATTTCCTCCCAGGCCACCTCCACCGCCCAGTAG
TCCTCCTCCATTGACCTGCAGGCGGCCTGTGCTGCTGGAGGTCTTTTTCA
GCAGTG

BS17795.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:35:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG10303-PA 1182 Osi4-RA 443..1182 756..17 3700 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-05 13:54:52
Subject Length Description Subject Range Query Range Score Percent Strand
Osi4-RA 1516 CG10303-RA 562..1301 756..17 3700 100 Minus
Osi4-RB 1522 CG10303-RB 562..1307 756..17 3630 99.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-05 13:54:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6220219..6220557 392..730 1695 100 Plus
3R 32079331 3R 6219622..6219933 85..396 1545 99.7 Plus
3R 32079331 3R 6218533..6218600 17..84 340 100 Plus
Blast to na_te.dros performed on 2015-02-05 13:54:47 has no hits.

BS17795.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:35:04 Download gff for BS17795.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10303-PA 443..1182 17..756 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 22:10:17 Download gff for BS17795.3prime
Subject Subject Range Query Range Percent Splice Strand
Osi4-RA 562..1304 13..756 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 16:15:40 Download gff for BS17795.3prime
Subject Subject Range Query Range Percent Splice Strand
Osi4-RA 562..1304 13..756 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 16:15:40 Download gff for BS17795.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 6218530..6218600 13..84 97 <- Plus
3R 6219622..6219929 85..392 100 <- Plus
3R 6220220..6220553 393..726 100 <- Plus
3R 6221191..6221220 727..756 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 22:10:17 Download gff for BS17795.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2044252..2044322 13..84 97 <- Plus
arm_3R 2045344..2045651 85..392 100 <- Plus
arm_3R 2045942..2046275 393..726 100 <- Plus
arm_3R 2046913..2046942 727..756 100   Plus

BS17795.5prime Sequence

828 bp (806 high quality bases) assembled on 2007-05-29

> BS17795.5prime
GAAGTTATCAGTCGACATGCCCAGGCATTTAGTTGCCAGCTGCCTTCTGC
TGGCTTTGGGTCTGAACATGAGCCTGGCGGCGATTCACAAGCGCAGTGGT
GCGAATTCGTTGGGAGTGGATCCCGAGGGCAAGCCTGCGGCGAATCCTGC
GGTCAGTGTGGAGAACACTGACCTGCTGGACAAGCTGAGCTGGAAGTGCG
CAAACAACGCGAGTTGCCTGTACGGGGTGGCCAATGGTCTCATGGCCTCC
TACCGTCGTGGTGAAACCCTCAAGCTGGGGCTTTTCGACCTGGTCAAGTT
GCCCGAACTAGATGCTTCTCGGAAGCACAAGTGGGGCACTGGGCGCGGTC
TCTCCGGCTTTATGGACTTTGTGACGGAAAACGCCATCAGGGTGCCCGTG
GGCCCCATGGTCTTCAGTGTTCAGCGAGCCGAGGACGACAGCGATTATAT
CGAGGTAGCACTGCTGAAAAAGACCTCCAGCAGCACAGGCCGCCTGCAGG
TCAATGGAGGAGGACTACTGGGCGGTGGAGGTGGCCTGGGAGGAAATGGT
GGCGGTGGAGGAGGCCTGCTGGGCGGCGGAGGTGGTGACAATGGCGGCGG
AGGCGGTCTTCTGGGCGGACGGAGGCGGCACCAGCACCAGGACAAGAAGC
AGTTCCAGATGTTCATACCCATGTACCTGGCGGCCACAACATTCGGGTGG
ACGATGGTGGCCGCAAAGGCGGTGGGGCTCCTGACTCTCAAGGCTCTGAT
CCTGTCCAAAATTGCCTTCGTGGTAGCCGCAATAGTGTTGATCAAGAAGC
TCATGGACAACGCCAGCGAAAAGATGAT

BS17795.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:35:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG10303-PA 1182 Osi4-RA 1..812 17..828 4060 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:26:53
Subject Length Description Subject Range Query Range Score Percent Strand
Osi4-RB 1522 CG10303-RB 120..931 17..828 4060 100 Plus
Osi4-RA 1516 CG10303-RA 120..931 17..828 4060 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:26:45
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6221190..6221662 489..17 2365 100 Minus
3R 32079331 3R 6220219..6220557 823..485 1695 100 Minus
Blast to na_te.dros performed on 2015-02-10 17:26:49 has no hits.

BS17795.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:35:09 Download gff for BS17795.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10303-PA 1..812 17..828 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 16:40:05 Download gff for BS17795.5prime
Subject Subject Range Query Range Percent Splice Strand
Osi4-RA 120..931 17..828 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:33:54 Download gff for BS17795.5prime
Subject Subject Range Query Range Percent Splice Strand
Osi4-RA 120..931 17..828 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:33:54 Download gff for BS17795.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 6220214..6220553 489..828 99 <- Minus
3R 6221191..6221662 17..488 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 16:40:05 Download gff for BS17795.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2045936..2046275 489..828 99 <- Minus
arm_3R 2046913..2047384 17..488 100   Minus

BS17795.complete Sequence

1214 bp assembled on 2009-12-07

GenBank Submission: KX800468

> BS17795.complete
GAAGTTATCAGTCGACATGCCCAGGCATTTAGTTGCCAGCTGCCTTCTGC
TGGCTTTGGGTCTGAACATGAGCCTGGCGGCGATTCACAAGCGCAGTGGT
GCGAATTCGTTGGGAGTGGATCCCGAGGGCAAGCCTGCGGCGAATCCTGC
GGTCAGTGTGGAGAACACTGACCTGCTGGACAAGCTGAGCTGGAAGTGCG
CAAACAACGCGAGTTGCCTGTACGGGGTGGCCAATGGTCTCATGGCCTCC
TACCGTCGTGGTGAAACCCTCAAGCTGGGGCTTTTCGACCTGGTCAAGTT
GCCCGAACTAGATGCTTCTCGGAAGCACAAGTGGGGCACTGGGCGCGGTC
TCTCCGGCTTTATGGACTTTGTGACGGAAAACGCCATCAGGGTGCCCGTG
GGCCCCATGGTCTTCAGTGTTCAGCGAGCCGAGGACGACAGCGATTATAT
CGAGGTAGCACTGCTGAAAAAGACCTCCAGCAGCACAGGCCGCCTGCAGG
TCAATGGAGGAGGACTACTGGGCGGTGGAGGTGGCCTGGGAGGAAATGGT
GGCGGTGGAGGAGGCCTGCTGGGCGGCGGAGGTGGTGACAATGGCGGCGG
AGGCGGTCTTCTGGGCGGACGGAGGCGGCACCAGCACCAGGACAAGAAGC
AGTTCCAGATGTTCATACCCATGTACCTGGCGGCCACAACATTCGGGTGG
ACGATGGTGGCCGCAAAGGCGGTGGGGCTCCTGACTCTCAAGGCTCTGAT
CCTGTCCAAAATTGCCTTCGTGGTAGCCGCAATAGTGTTGATCAAGAAGC
TCATGGACAACGCCAGCGAAAAGATGATGTACCAGTTCCCGGAACAGACG
CCGTACATGATGCCGTACGGCATGGACTATCCGCTTCATGGAGCGGAAAT
ATCGCCGGAAATGTACCCGTCATCGCTGCACCACCTGGCGATGGCCGGAG
GCGGCCAGCTGCCAGGACATCCCGGACATCCGGGACTGGAGAGTCTGAGC
GCCGAGAGCCACCTGCACTCCGCCCAGGTGTCCAGCGACGGCAGCAATAA
CACACAGGTGCTCGCCGCCTTGGGTGGTCTGGGTGGACTGGGACACAAGA
TCAAACGTGAGGACTCGTGGATGGCGAAGACCACTCCCGCCCGGCGACCC
CTGATCTACAACTACGTGCAACCACACATGCCGTACTACCGCTCCTGAAA
GCTTTCTAGACCAT

BS17795.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:46:51
Subject Length Description Subject Range Query Range Score Percent Strand
Osi4-RA 1182 CG10303-PA 1..1182 17..1198 5910 100 Plus
Osi4-RB 1188 CG10303-PB 1..1188 17..1198 5815 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:46:52
Subject Length Description Subject Range Query Range Score Percent Strand
Osi4-RA 1516 CG10303-RA 120..1301 17..1198 5910 100 Plus
Osi4-RB 1522 CG10303-RB 120..1307 17..1198 5815 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:46:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6221190..6221662 489..17 2365 100 Minus
3R 32079331 3R 6220219..6220557 823..485 1695 100 Minus
3R 32079331 3R 6219622..6219933 1130..819 1545 99.7 Minus
3R 32079331 3R 6218533..6218600 1198..1131 340 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:46:50 has no hits.

BS17795.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:26:38 Download gff for BS17795.complete
Subject Subject Range Query Range Percent Splice Strand
Osi4-RA 1..1182 17..1198 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:39:32 Download gff for BS17795.complete
Subject Subject Range Query Range Percent Splice Strand
Osi4-RA 120..1300 17..1197 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:57:30 Download gff for BS17795.complete
Subject Subject Range Query Range Percent Splice Strand
Osi4-RA 120..1300 17..1197 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:26:38 Download gff for BS17795.complete
Subject Subject Range Query Range Percent Splice Strand
Osi4-RA 120..1304 17..1202 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:56:38 Download gff for BS17795.complete
Subject Subject Range Query Range Percent Splice Strand
Osi4-RA 120..1300 17..1197 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:56:38 Download gff for BS17795.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6218534..6218600 1131..1197 100 <- Minus
3R 6219622..6219929 823..1130 100 <- Minus
3R 6220220..6220553 489..822 100 <- Minus
3R 6221191..6221662 17..488 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:57:30 Download gff for BS17795.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2044256..2044322 1131..1197 100 <- Minus
arm_3R 2045344..2045651 823..1130 100 <- Minus
arm_3R 2045942..2046275 489..822 100 <- Minus
arm_3R 2046913..2047384 17..488 100   Minus

BS17795.pep Sequence

Translation from 16 to 1197

> BS17795.pep
MPRHLVASCLLLALGLNMSLAAIHKRSGANSLGVDPEGKPAANPAVSVEN
TDLLDKLSWKCANNASCLYGVANGLMASYRRGETLKLGLFDLVKLPELDA
SRKHKWGTGRGLSGFMDFVTENAIRVPVGPMVFSVQRAEDDSDYIEVALL
KKTSSSTGRLQVNGGGLLGGGGGLGGNGGGGGGLLGGGGGDNGGGGGLLG
GRRRHQHQDKKQFQMFIPMYLAATTFGWTMVAAKAVGLLTLKALILSKIA
FVVAAIVLIKKLMDNASEKMMYQFPEQTPYMMPYGMDYPLHGAEISPEMY
PSSLHHLAMAGGGQLPGHPGHPGLESLSAESHLHSAQVSSDGSNNTQVLA
ALGGLGGLGHKIKREDSWMAKTTPARRPLIYNYVQPHMPYYRS*

BS17795.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:56:40
Subject Length Description Subject Range Query Range Score Percent Strand
Osi4-PA 393 CG10303-PA 1..393 1..393 2062 100 Plus
Osi4-PB 395 CG10303-PB 1..395 1..393 2045 99.2 Plus