Clone Sequence Records
BS17832.complete Sequence
800 bp assembled on 2010-02-09
GenBank Submission: KX806447
> BS17832.complete
GAAGTTATCAGTCGACATGAATAATCGCAATCGGGGTTGGGGTCGTTATG
GCCTTAGAACCGGAAGACCTGGTGGCGAGCCAGTTCCTGCGGAGGGACCG
GAGGTCTTAGTCATCAACGAGCGGGAGTTGCGGGCCTTCATCTTCCGGGT
GTACCTATCCTCCGTAGTGCTGTGCCTGCTGTCTTCCATTTCGTGGATCA
TACTGTCGGCACTCGCTGTGAGGGTCTACAAGGCAATTCCAGTGCCGCCG
TTCGTTTGGCTGATATTAGCTTTCATCATTCTCTCAGTGCTCGGCTGCAT
CGCACAGACTCCAGCATTGACCTTGTTATGCTGGGGATTGGTGCTGGGAT
CCTTGTTCTTTCTCACCCTGTTCGGAGCGTATTATATGCATCTAGTGCGC
GTCTGGGTCCTTTTGATTGCCATTTTGGTTGCCGGATCCCTGCTGGCCCT
GCTGCATTTGTATGGGGCCAAAAGTCCGGAGGTTCTGCTACCCAACATTA
TCTGTACTTGCTGCATTTTTCTGCTGCTCACCGTCACCATGATCGTCCTG
CTAATACTCTTCCTGATCATCAATGATATGCGGTATCTCCTGGCACTTGC
CATAGTGTTCGTCATCCTGATCGCATTCATGGCTCCATTTCAGGCTCGTT
TCATTTGTGGAAGGCTGCAGCAGGTGCCTTATGGGGAGACTGCGGATTGC
GCCAATGGCATTTACCTACACTTTATTTTTCTACTCTCCTGCATGCTCGT
TTTTGCCCTGTACTATAAGCTAGTTAATAGTTGAAAGCTTTCTAGACCAT
BS17832.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:04:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32988-RA | 768 | CG32988-PA | 1..768 | 17..784 | 3840 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32988-RA | 829 | CG32988-RA | 39..809 | 15..785 | 3855 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8864902..8865672 | 15..785 | 3855 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:04:21 has no hits.
BS17832.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:21:34 Download gff for
BS17832.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-RA | 1..768 | 17..784 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:14:37 Download gff for
BS17832.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-RA | 1..767 | 17..783 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:26 Download gff for
BS17832.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-RA | 41..807 | 17..783 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:21:34 Download gff for
BS17832.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-RA | 1..768 | 17..784 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:00 Download gff for
BS17832.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-RA | 41..807 | 17..783 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:00 Download gff for
BS17832.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8864904..8865670 | 17..783 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:26 Download gff for
BS17832.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8864904..8865670 | 17..783 | 100 | | Plus |
BS17832.5prime Sequence
798 bp (798 high quality bases) assembled on 2007-05-30
> BS17832.5prime
GAAGTTATCCCTCTACATGAATAATCGCAATCGGGGTTGGGGTCGTTATG
GCCTTAGAACCGGAAGACCTGGTGGCGAGCCAGTTCCTGCGGAGGGACCG
GAGGTCTTAGTCATCAACGAGCGGGAGTTGCGGGCCTTCATCTTCCGGGT
GTACCTATCCTCCGTAGTGCTGTGCCTGCTGTCTTCCATTTCGTGGATCA
TACTGTCGGCACTCGCTGTGAGGGTCTACAAGGCAATTCCAGTGCCGCCG
TTCGTTTGGCTGATATTAGCTTTCATCATTCTCTCAGTGCTCGGCTGCAT
CGCACAGACTCCAGCATTGACCTTGTTATGCTGGGGATTGGTGCTGGGAT
CCTTGTTCTTTCTCACCCTGTTCGGAGCGTATTATATGCATCTAGTGCGC
GTCTGGGTCCTTTTGATTGCCATTTTGGTTGCCGGATCCCTGCTGGCCCT
GCTGCATTTGTATGGGGCCAAAAGTCCGGAGGTTCTGCTACCCAACATTA
TCTGTACTTGCTGCATTTTTCTGCTGCTCACCGTCACCATGATCGTCCTG
CTAATACTCTTCCTGATCATCAATGATATGCGGTATCTCCTGGCACTTGC
CATAGTGTTCGTCATCCTGATCGCATTCATGGCTCCATTTCAGGCTCGTT
TCATTTGTGGAAGGCTGCAGCAGGTGCCTTATGGGGAGACTGCGGATTGC
GCCAATGGCATTTACCTACACTTTATTTTTCTACTCTCCTGCATGCTCGT
TTTTGCCCTGTACTATAAGCTAGTTAATAGTTGAAAGCTTTCTAGACC
BS17832.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:38:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32988-PA | 768 | CG32988-RA | 1..768 | 17..784 | 3840 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:34:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32988-RA | 829 | CG32988-RA | 39..809 | 15..785 | 3855 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:34:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8864902..8865672 | 15..785 | 3855 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:34:51 has no hits.
BS17832.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:39:01 Download gff for
BS17832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-PA | 1..768 | 17..784 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 14:08:14 Download gff for
BS17832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-RA | 39..809 | 15..785 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:57:52 Download gff for
BS17832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-RA | 39..809 | 15..785 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:57:52 Download gff for
BS17832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8864902..8865672 | 15..785 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 14:08:14 Download gff for
BS17832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8864902..8865672 | 15..785 | 100 | | Plus |
BS17832.3prime Sequence
798 bp (798 high quality bases) assembled on 2007-05-30
> BS17832.3prime
ATGGTCTAGAAAGCTTTCAACTATTAACTAGCTTATAGTACAGGGCAAAA
ACGAGCATGCAGGAGAGTAGAAAAATAAAGTGTAGGTAAATGCCATTGGC
GCAATCCGCAGTCTCCCCATAAGGCACCTGCTGCAGCCTTCCACAAATGA
AACGAGCCTGAAATGGAGCCATGAATGCGATCAGGATGACGAACACTATG
GCAAGTGCCAGGAGATACCGCATATCATTGATGATCAGGAAGAGTATTAG
CAGGACGATCATGGTGACGGTGAGCAGCAGAAAAATGCAGCAAGTACAGA
TAATGTTGGGTAGCAGAACCTCCGGACTTTTGGCCCCATACAAATGCAGC
AGGGCCAGCAGGGATCCGGCAACCAAAATGGCAATCAAAAGGACCCAGAC
GCGCACTAGATGCATATAATACGCTCCGAACAGGGTGAGAAAGAACAAGG
ATCCCAGCACCAATCCCCAGCATAACAAGGTCAATGCTGGAGTCTGTGCG
ATGCAGCCGAGCACTGAGAGAATGATGAAAGCTAATATCAGCCAAACGAA
CGGCGGCACTGGAATTGCCTTGTAGACCCTCACAGCGAGTGCCGACAGTA
TGATCCACGAAATGGAAGACAGCAGGCACAGCACTACGGAGGATAGGTAC
ACCCGGAAGATGAAGGCCCGCAACTCCCGCTCGTTGATGACTAAGACCTC
CGGTCCCTCCGCAGGAACTGGCTCGCCACCAGGTCTTCCGGTTCTAAGGC
CATAACGACCCCAACCCCGATTGCGATTATTCATGTCGACTGATAACT
BS17832.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:38:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32988-PA | 768 | CG32988-RA | 1..768 | 784..17 | 3840 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:02:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32988-RA | 829 | CG32988-RA | 39..809 | 786..16 | 3855 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:02:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8864902..8865672 | 786..16 | 3855 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 00:02:40 has no hits.
BS17832.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:38:57 Download gff for
BS17832.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-PA | 1..768 | 17..784 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 03:43:45 Download gff for
BS17832.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-RA | 33..809 | 16..794 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:00:32 Download gff for
BS17832.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32988-RA | 33..809 | 16..794 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:00:32 Download gff for
BS17832.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8864896..8865672 | 16..794 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 03:43:45 Download gff for
BS17832.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8864896..8865672 | 16..794 | 99 | | Minus |
BS17832.pep Sequence
Translation from 16 to 783
> BS17832.pep
MNNRNRGWGRYGLRTGRPGGEPVPAEGPEVLVINERELRAFIFRVYLSSV
VLCLLSSISWIILSALAVRVYKAIPVPPFVWLILAFIILSVLGCIAQTPA
LTLLCWGLVLGSLFFLTLFGAYYMHLVRVWVLLIAILVAGSLLALLHLYG
AKSPEVLLPNIICTCCIFLLLTVTMIVLLILFLIINDMRYLLALAIVFVI
LIAFMAPFQARFICGRLQQVPYGETADCANGIYLHFIFLLSCMLVFALYY
KLVNS*
BS17832.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:01:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32988-PA | 255 | CG32988-PA | 1..255 | 1..255 | 1306 | 100 | Plus |
| CG32983-PA | 250 | CG32983-PA | 22..227 | 41..247 | 281 | 31.4 | Plus |
| CG32987-PA | 257 | CG32987-PA | 23..233 | 41..248 | 204 | 22.3 | Plus |
