Clone Sequence Records
BS17844.3prime Sequence
734 bp (678 high quality bases) assembled on 2007-05-30
> BS17844.3prime
ATGGTCTAGAAAGCTTTTAGCCTACCTCCTCGATGGTGGGGCCAGCACCG
CCGGCTCCGGCAGCGCCAGCGGCACCAGCCGCTCCGGGCATACCTCCGGG
ACCGCCGGGCATGCCACCGGGTGGGAAACCGGCGCCCTGGTATAGCTTGG
TAATGATCGGGTTGCACACACCCTCCAGTTCCTTCTGGCGGTGCTCGTAC
TCCTCCTTGTCAGCCAGCTGGTTGGCATCCAGCCACTTGATGGTCTCGTT
GCACTTGTCCAGGATTGTGGTGCGGTCAGAGTCCGAGATCTTGGTCTTCA
GGTTATCCTCGTCGAGGGTGGCCTTCATGTTGAAGCAGTACGACTCGAGG
CCGTTCTTGGCGGCAATGGTCTCCTTCTGCTTCTCATCCTCGTTGCGGTA
CTTCTCGGCCTCGTTGACCATGCGCTCGATGTCCTCCTTGGAGAGACGAC
CCTTGTCGTTGGTAATGGTGATCTTGTTCTCCTTGTTGGTCGAACGCTCC
AGGGCAGTCACGTTGAGGATACCGTTGGCATCGATATCGAAGGTGACCTC
GATCTGGGGCACACCACGTGGTGCGGGGGGGATGCCCGACAGCTCGAACT
TGCCGAGCAGGTTGTTGTCCTTGGTCATGGCACGCTCTCCCTCGTACACC
TGGATCAGCACACCGGGCTGGTTGTCCGAGTAAGTGGTGAAGGTCTGGGT
CTGCTTGGTCGGGATGGTGGTGTTGCGCTTGATC
BS17844.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:40:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4264-PE | 1956 | Hsc70-4-RE | 1239..1949 | 734..24 | 3530 | 99.8 | Minus |
| CG4264-PF | 1956 | Hsc70-4-RF | 1239..1949 | 734..24 | 3530 | 99.8 | Minus |
| CG4264-PA | 1956 | Hsc70-4-RA | 1239..1949 | 734..24 | 3530 | 99.8 | Minus |
| CG4264-PC | 1956 | Hsc70-4-RC | 1239..1949 | 734..24 | 3530 | 99.8 | Minus |
| CG4264-PD | 1956 | Hsc70-4-RD | 1239..1949 | 734..24 | 3530 | 99.8 | Minus |
| CG4264-PB | 1956 | Hsc70-4-RB | 1239..1949 | 734..24 | 3530 | 99.8 | Minus |
| CG8937-PC | 1668 | Hsc70-1-RC | 1252..1301 | 463..414 | 175 | 94 | Minus |
| CG8937-PD | 1668 | Hsc70-1-RD | 1252..1301 | 463..414 | 175 | 94 | Minus |
| CG8937-PA | 1926 | Hsc70-1-RA | 1510..1559 | 463..414 | 175 | 94 | Minus |
| CG4147-PB | 1971 | Hsc70-3-RB | 1387..1428 | 655..614 | 160 | 95.2 | Minus |
| CG4147-PA | 1971 | Hsc70-3-RA | 1387..1428 | 655..614 | 160 | 95.2 | Minus |
| CG4147-PD | 1971 | Hsc70-3-RD | 1387..1428 | 655..614 | 160 | 95.2 | Minus |
| CG4147-PC | 1971 | Hsc70-3-RC | 1387..1428 | 655..614 | 160 | 95.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:36:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsc70-4-RG | 2336 | CG4264-RG | 1320..2038 | 734..16 | 3550 | 99.6 | Minus |
| Hsc70-4-RB | 2339 | CG4264-RB | 1323..2041 | 734..16 | 3550 | 99.6 | Minus |
| Hsc70-4-RD | 2352 | CG4264-RD | 1336..2054 | 734..16 | 3550 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:36:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15245598..15246316 | 734..16 | 3550 | 99.6 | Minus |
| 3L | 28110227 | 3L | 13976950..13977306 | 734..378 | 630 | 78.4 | Minus |
| 3R | 32079331 | 3R | 12507294..12507623 | 707..378 | 480 | 76.4 | Minus |
| 3R | 32079331 | 3R | 12510577..12510906 | 707..378 | 480 | 76.4 | Minus |
| 3R | 32079331 | 3R | 12465969..12466298 | 378..707 | 480 | 76.4 | Plus |
| 3R | 32079331 | 3R | 12504011..12504340 | 707..378 | 480 | 76.4 | Minus |
| 3R | 32079331 | 3R | 11954701..11955057 | 378..734 | 465 | 75.4 | Plus |
| 3R | 32079331 | 3R | 11960021..11960377 | 734..378 | 465 | 75.4 | Minus |
| 3R | 32079331 | 3R | 24055536..24055867 | 398..729 | 415 | 75 | Plus |
| X | 23542271 | X | 11803058..11803269 | 516..727 | 400 | 79.2 | Plus |
| 3R | 32079331 | 3R | 13046679..13046988 | 707..398 | 320 | 73.5 | Minus |
Blast to na_te.dros performed on 2015-02-12 16:36:02 has no hits.
BS17844.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:40:34 Download gff for
BS17844.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4264-PF | 1239..1956 | 17..734 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 17:20:08 Download gff for
BS17844.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsc70-4-RD | 1336..2060 | 9..734 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:46:53 Download gff for
BS17844.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsc70-4-RD | 1336..2060 | 9..734 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:46:53 Download gff for
BS17844.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15245598..15246322 | 9..734 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 17:20:08 Download gff for
BS17844.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11071320..11072044 | 9..734 | 99 | | Minus |
BS17844.5prime Sequence
881 bp (765 high quality bases) assembled on 2007-05-30
> BS17844.5prime
GAAGTTATCACTCGACATGTCTAAAGCTCCTGCTGTTGGTATTGATTTGG
GCACCACCTACTCGTGCGTGGGCGTGTTCCAGCATGGCAAGGTCGAGATC
ATCGCCAACGACCAGGGTAATCGTACCACTCCATCCTATGTTGCCTTCAC
CGATACGGAGCGTCTGATCGGAGATGCCGCCAAGAACCAGGTGGCGATGA
ACCCGACCCAGACGATCTTCGACGCCAAGCGCTTGATTGGTCGCAAGTTC
GATGATGCCGCCGTGCAGTCTGACATGAAGCACTGGCCCTTCGAGGTGGT
CAGCGCCGATGGCAAGCCCAAGATCGAGGTGACCTACAAGGACGAGAAGA
AGACCTTCTTCCCCGAGGAGATCTCTTCGATGGTGCTTACCAAGATGAAG
GAGACCGCCGAGGCCTATCTGGGCAAGACTGTGACCAACGCGGTCATCAC
CGTGCCGGCCTACTTCAACGACTCTCAGCGTCAGGCGACCAAGGACGCCG
GCACCATCGCCGGTCTGAACGTGCTGCGTATCATCAACGAGCCCACTGCC
GCTGCTATCGCTTACGGTCTGGACAAGAAGGCTGTTGGAGAGCGCAACGT
GCTCATCTTCGATCTGGGCGGCGGCACCTTCGATGTGTCCATCCTGTCGA
TCGATGACGGTATCTTTGAGGTCAAGTCCACGGCCGGAGATACGCATCTG
GGTGGTGAGGACTTCGACAACCGTCTGGTCACCCACTTCGTGCAGGAGTT
CAAGCGCAAGCACAAGAAGGATCTGACCACCAACAAGCGTGCTCTGCGTC
GTCTGCGCACCGCTTGCGAGCGTGCAAAGCGTACCCTGTCGTCCTCACCC
CAGGCAGCATTGAGATCGACTCTCTGTTCGA
BS17844.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:40:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4264-PE | 1956 | Hsc70-4-RE | 1..830 | 17..846 | 4150 | 100 | Plus |
| CG4264-PF | 1956 | Hsc70-4-RF | 1..830 | 17..846 | 4150 | 100 | Plus |
| CG4264-PA | 1956 | Hsc70-4-RA | 1..830 | 17..846 | 4150 | 100 | Plus |
| CG4264-PC | 1956 | Hsc70-4-RC | 1..830 | 17..846 | 4150 | 100 | Plus |
| CG4264-PD | 1956 | Hsc70-4-RD | 1..830 | 17..846 | 4150 | 100 | Plus |
| CG4264-PB | 1956 | Hsc70-4-RB | 1..830 | 17..846 | 4150 | 100 | Plus |
| CG6489-PA | 1926 | Hsp70Bc-RA | 23..92 | 48..117 | 175 | 90 | Plus |
| CG5834-PA | 1926 | Hsp70Bbb-RA | 23..92 | 48..117 | 175 | 90 | Plus |
| CG31359-PA | 1926 | Hsp70Bb-RA | 23..92 | 48..117 | 175 | 90 | Plus |
| CG31449-PA | 1926 | Hsp70Ba-RA | 23..92 | 48..117 | 175 | 90 | Plus |
| CG18743-PA | 1929 | Hsp70Ab-RA | 23..92 | 48..117 | 175 | 90 | Plus |
| CG31366-PA | 1929 | Hsp70Aa-RA | 23..92 | 48..117 | 175 | 90 | Plus |
| CG8937-PA | 1926 | Hsc70-1-RA | 64..113 | 80..129 | 175 | 94 | Plus |
| CG6489-PA | 1926 | Hsp70Bc-RA | 337..399 | 362..424 | 165 | 90.4 | Plus |
| CG5834-PA | 1926 | Hsp70Bbb-RA | 337..399 | 362..424 | 165 | 90.4 | Plus |
| CG31359-PA | 1926 | Hsp70Bb-RA | 337..399 | 362..424 | 165 | 90.4 | Plus |
| CG31449-PA | 1926 | Hsp70Ba-RA | 337..399 | 362..424 | 165 | 90.4 | Plus |
| CG6489-PA | 1926 | Hsp70Bc-RA | 565..621 | 590..646 | 160 | 91.2 | Plus |
| CG5834-PA | 1926 | Hsp70Bbb-RA | 565..621 | 590..646 | 160 | 91.2 | Plus |
| CG31359-PA | 1926 | Hsp70Bb-RA | 565..621 | 590..646 | 160 | 91.2 | Plus |
| CG31449-PA | 1926 | Hsp70Ba-RA | 565..621 | 590..646 | 160 | 91.2 | Plus |
| CG18743-PA | 1929 | Hsp70Ab-RA | 565..621 | 590..646 | 160 | 91.2 | Plus |
| CG31366-PA | 1929 | Hsp70Aa-RA | 565..621 | 590..646 | 160 | 91.2 | Plus |
| CG8937-PA | 1926 | Hsc70-1-RA | 140..185 | 156..201 | 155 | 93.4 | Plus |
| CG5436-PA | 1908 | Hsp68-RA | 145..179 | 170..204 | 150 | 97.1 | Plus |
| CG5436-PA | 1908 | Hsp68-RA | 418..461 | 443..486 | 145 | 93.1 | Plus |
| CG5436-PA | 1908 | Hsp68-RA | 70..128 | 95..153 | 145 | 89.8 | Plus |
| CG4147-PB | 1971 | Hsc70-3-RB | 571..643 | 509..581 | 140 | 87.6 | Plus |
| CG4147-PA | 1971 | Hsc70-3-RA | 571..643 | 509..581 | 140 | 87.6 | Plus |
| CG4147-PD | 1971 | Hsc70-3-RD | 571..643 | 509..581 | 140 | 87.6 | Plus |
| CG4147-PC | 1971 | Hsc70-3-RC | 571..643 | 509..581 | 140 | 87.6 | Plus |
| CG4264-PE | 1956 | Hsc70-4-RE | 840..866 | 855..881 | 135 | 100 | Plus |
| CG4264-PF | 1956 | Hsc70-4-RF | 840..866 | 855..881 | 135 | 100 | Plus |
| CG4264-PA | 1956 | Hsc70-4-RA | 840..866 | 855..881 | 135 | 100 | Plus |
| CG4264-PC | 1956 | Hsc70-4-RC | 840..866 | 855..881 | 135 | 100 | Plus |
| CG4264-PD | 1956 | Hsc70-4-RD | 840..866 | 855..881 | 135 | 100 | Plus |
| CG4264-PB | 1956 | Hsc70-4-RB | 840..866 | 855..881 | 135 | 100 | Plus |
| CG6489-PA | 1926 | Hsp70Bc-RA | 722..753 | 744..775 | 135 | 96.8 | Plus |
| CG5834-PA | 1926 | Hsp70Bbb-RA | 722..753 | 744..775 | 135 | 96.8 | Plus |
| CG31359-PA | 1926 | Hsp70Bb-RA | 722..753 | 744..775 | 135 | 96.8 | Plus |
| CG31449-PA | 1926 | Hsp70Ba-RA | 722..753 | 744..775 | 135 | 96.8 | Plus |
| CG7756-PA | 1902 | Hsc70-2-RA | 571..617 | 587..633 | 135 | 91.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:50:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsc70-4-RG | 2336 | CG4264-RG | 82..947 | 17..881 | 4275 | 99.7 | Plus |
| Hsc70-4-RB | 2339 | CG4264-RB | 85..950 | 17..881 | 4275 | 99.7 | Plus |
| Hsc70-4-RD | 2352 | CG4264-RD | 98..963 | 17..881 | 4275 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:50:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15244360..15245225 | 17..881 | 4250 | 99.7 | Plus |
| 3R | 32079331 | 3R | 12506038..12506787 | 29..775 | 1240 | 78 | Plus |
| 3R | 32079331 | 3R | 12509321..12510070 | 29..775 | 1240 | 78 | Plus |
| 3R | 32079331 | 3R | 24056283..24057094 | 844..36 | 1235 | 77.1 | Minus |
| 3R | 32079331 | 3R | 12466805..12467554 | 775..29 | 1225 | 77.9 | Minus |
| 3R | 32079331 | 3R | 12502755..12503504 | 29..775 | 1225 | 77.9 | Plus |
| 3R | 32079331 | 3R | 11955537..11956286 | 775..29 | 1210 | 77.7 | Minus |
| 3R | 32079331 | 3R | 11958792..11959541 | 29..775 | 1210 | 77.7 | Plus |
| 3R | 32079331 | 3R | 13045581..13046163 | 187..766 | 795 | 76.2 | Plus |
| 3L | 28110227 | 3L | 13975919..13976565 | 224..869 | 755 | 74.8 | Plus |
| X | 23542271 | X | 11803808..11804160 | 717..362 | 635 | 79.2 | Minus |
| 3L | 28110227 | 3L | 13974589..13974773 | 35..219 | 475 | 83.8 | Plus |
| 3R | 32079331 | 3R | 13044985..13045131 | 47..193 | 330 | 81.6 | Plus |
Blast to na_te.dros performed on 2015-02-13 13:50:34 has no hits.
BS17844.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:40:41 Download gff for
BS17844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4264-PD | 1..865 | 17..880 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 19:02:22 Download gff for
BS17844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsc70-4-RD | 98..962 | 17..880 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:13:00 Download gff for
BS17844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsc70-4-RD | 98..962 | 17..880 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:13:00 Download gff for
BS17844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15244351..15245224 | 8..880 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 19:02:22 Download gff for
BS17844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11070073..11070946 | 8..880 | 99 | | Plus |
BS17844.complete Sequence
1988 bp assembled on 2008-08-15
GenBank Submission: KX805364
> BS17844.complete
GAAGTTATCACTCGACATGTCTAAAGCTCCTGCTGTTGGTATTGATTTGG
GCACCACCTACTCGTGCGTGGGCGTGTTCCAGCATGGCAAGGTCGAGATC
ATCGCCAACGACCAGGGTAATCGTACCACTCCATCCTATGTTGCCTTCAC
CGATACGGAGCGTCTGATCGGAGATGCCGCCAAGAACCAGGTGGCGATGA
ACCCGACCCAGACGATCTTCGACGCCAAGCGCTTGATTGGTCGCAAGTTC
GATGATGCCGCCGTGCAGTCTGACATGAAGCACTGGCCCTTCGAGGTGGT
CAGCGCCGATGGCAAGCCCAAGATCGAGGTGACCTACAAGGACGAGAAGA
AGACCTTCTTCCCCGAGGAGATCTCTTCGATGGTGCTTACCAAGATGAAG
GAGACCGCCGAGGCCTATCTGGGCAAGACTGTGACCAACGCGGTCATCAC
CGTGCCGGCCTACTTCAACGACTCTCAGCGTCAGGCGACCAAGGACGCCG
GCACCATCGCCGGTCTGAACGTGCTGCGTATCATCAACGAGCCCACTGCC
GCTGCTATCGCTTACGGTCTGGACAAGAAGGCTGTTGGAGAGCGCAACGT
GCTCATCTTCGATCTGGGCGGCGGCACCTTCGATGTGTCCATCCTGTCGA
TCGATGACGGTATCTTTGAGGTCAAGTCCACGGCCGGAGATACGCATCTG
GGTGGTGAGGACTTCGACAACCGTCTGGTCACCCACTTCGTGCAGGAGTT
CAAGCGCAAGCACAAGAAGGATCTGACCACCAACAAGCGTGCTCTGCGTC
GTCTGCGCACCGCTTGCGAGCGTGCAAAGCGTACCCTGTCGTCCTCCACC
CAGGCCAGCATTGAGATCGACTCTCTGTTCGAGGGTACCGACTTCTACAC
CTCGATTACTCGTGCCCGTTTCGAGGAGTTGAACGCTGATCTGTTCCGCA
GCACCATGGACCCCGTGGAGAAGGCTCTGCGTGACGCCAAGCTGGACAAG
TCGGTCATCCACGACATTGTGCTGGTCGGTGGCTCCACCCGTATCCCCAA
GGTGCAGCGCCTGCTGCAGGATCTGTTCAATGGCAAGGAGCTGAACAAGT
CGATCAATCCCGATGAGGCTGTGGCCTACGGTGCTGCCGTCCAGGCCGCC
ATTCTGCACGGCGACAAGTCGCAGGAGGTGCAGGATCTGCTGCTGCTCGA
TGTGACTCCTCTGTCCCTGGGTATCGAAACCGCTGGCGGTGTGATGAGCG
TGTTGATCAAGCGCAACACCACCATCCCGACCAAGCAGACCCAGACCTTC
ACCACCTACTCGGACAACCAGCCCGGTGTGCTGATCCAGGTGTACGAGGG
AGAGCGTGCCATGACCAAGGACAACAACCTGCTCGGCAAGTTCGAGCTGT
CGGGCATCCCCCCCGCACCACGTGGTGTGCCCCAGATCGAGGTCACCTTC
GATATCGATGCCAACGGTATCCTCAACGTGACTGCCCTGGAGCGTTCGAC
CAACAAGGAGAACAAGATCACCATTACCAACGACAAGGGTCGTCTCTCCA
AGGAGGACATCGAGCGCATGGTCAACGAGGCCGAGAAGTACCGCAACGAG
GATGAGAAGCAGAAGGAGACCATTGCCGCCAAGAACGGCCTCGAGTCGTA
CTGCTTCAACATGAAGGCCACCCTCGACGAGGATAACCTGAAGACCAAGA
TCTCGGACTCTGACCGCACCACAATCCTGGACAAGTGCAACGAGACCATC
AAGTGGCTGGATGCCAACCAGCTGGCTGACAAGGAGGAGTACGAGCACCG
CCAGAAGGAACTGGAGGGTGTGTGCAACCCGATCATTACCAAGCTATACC
AGGGCGCCGGTTTCCCACCCGGTGGCATGCCCGGCGGTCCCGGAGGTATG
CCCGGAGCGGCTGGTGCCGCTGGCGCTGCCGGAGCCGGCGGTGCTGGCCC
CACCATCGAGGAGGTCGACTAAAAGCTTTCTAGACCAT
BS17844.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:11:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsc70-4-RG | 1956 | CG4264-PG | 1..1956 | 17..1972 | 9780 | 100 | Plus |
| Hsc70-4-RB | 1956 | CG4264-PB | 1..1956 | 17..1972 | 9780 | 100 | Plus |
| Hsc70-4-RD | 1956 | CG4264-PD | 1..1956 | 17..1972 | 9780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:11:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsc70-4-RG | 2336 | CG4264-RG | 82..2038 | 17..1973 | 9785 | 100 | Plus |
| Hsc70-4-RB | 2339 | CG4264-RB | 85..2041 | 17..1973 | 9785 | 100 | Plus |
| Hsc70-4-RD | 2352 | CG4264-RD | 98..2054 | 17..1973 | 9785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:11:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15244360..15246316 | 17..1973 | 9785 | 100 | Plus |
| 3L | 28110227 | 3L | 13975919..13977306 | 224..1611 | 2215 | 77.3 | Plus |
| 3R | 32079331 | 3R | 12506038..12507623 | 29..1611 | 2000 | 75.2 | Plus |
| 3R | 32079331 | 3R | 12502755..12504340 | 29..1611 | 1985 | 75.2 | Plus |
| 3R | 32079331 | 3R | 12509321..12510906 | 29..1611 | 1985 | 75.2 | Plus |
| 3R | 32079331 | 3R | 12465969..12467554 | 1611..29 | 1970 | 75.1 | Minus |
| 3R | 32079331 | 3R | 24055536..24057094 | 1591..36 | 1940 | 75.1 | Minus |
| 3R | 32079331 | 3R | 11954701..11956286 | 1611..29 | 1925 | 74.9 | Minus |
| 3R | 32079331 | 3R | 11958792..11960377 | 29..1611 | 1925 | 74.9 | Plus |
| 3R | 32079331 | 3R | 13045581..13046988 | 187..1591 | 1260 | 72.8 | Plus |
| X | 23542271 | X | 11803808..11804160 | 717..362 | 635 | 79.2 | Minus |
| X | 23542271 | X | 11803058..11803515 | 1473..1010 | 560 | 75.2 | Minus |
| 3L | 28110227 | 3L | 13974589..13974773 | 35..219 | 475 | 83.8 | Plus |
| 3R | 32079331 | 3R | 13044985..13045131 | 47..193 | 330 | 81.6 | Plus |
| 2R | 25286936 | 2R | 14254871..14255028 | 549..392 | 310 | 79.7 | Minus |
| 2R | 25286936 | 2R | 14253788..14253925 | 1470..1333 | 195 | 76.1 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:11:25 has no hits.
BS17844.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:40:22 Download gff for
BS17844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsc70-4-RA | 148..2118 | 9..1980 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:16:19 Download gff for
BS17844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsc70-4-RD | 98..2051 | 17..1970 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:53:28 Download gff for
BS17844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsc70-4-RA | 156..2109 | 17..1970 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:15:17 Download gff for
BS17844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsc70-4-RD | 98..2051 | 17..1970 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:15:17 Download gff for
BS17844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15244360..15246313 | 17..1970 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:16:19 Download gff for
BS17844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11070082..11072035 | 17..1970 | 100 | | Plus |
BS17844.pep Sequence
Translation from 16 to 1971
> BS17844.pep
MSKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERL
IGDAAKNQVAMNPTQTIFDAKRLIGRKFDDAAVQSDMKHWPFEVVSADGK
PKIEVTYKDEKKTFFPEEISSMVLTKMKETAEAYLGKTVTNAVITVPAYF
NDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAVGERNVLIFDL
GGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHK
KDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGTDFYTSITRA
RFEELNADLFRSTMDPVEKALRDAKLDKSVIHDIVLVGGSTRIPKVQRLL
QDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQDLLLLDVTPLS
LGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMT
KDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENK
ITITNDKGRLSKEDIERMVNEAEKYRNEDEKQKETIAAKNGLESYCFNMK
ATLDEDNLKTKISDSDRTTILDKCNETIKWLDANQLADKEEYEHRQKELE
GVCNPIITKLYQGAGFPPGGMPGGPGGMPGAAGAAGAAGAGGAGPTIEEV
D*
BS17844.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:29:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsc70-4-PG | 651 | CG4264-PG | 1..651 | 1..651 | 3324 | 100 | Plus |
| Hsc70-4-PB | 651 | CG4264-PB | 1..651 | 1..651 | 3324 | 100 | Plus |
| Hsc70-4-PD | 651 | CG4264-PD | 1..651 | 1..651 | 3324 | 100 | Plus |
| Hsc70-4-PC | 651 | CG4264-PC | 1..651 | 1..651 | 3324 | 100 | Plus |
| Hsc70-4-PA | 651 | CG4264-PA | 1..651 | 1..651 | 3324 | 100 | Plus |
