Clone BS17851 Report

Search the DGRC for BS17851

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:178
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG14422-RA
Protein status:BS17851.pep: full length peptide match
Sequenced Size:936

Clone Sequence Records

BS17851.complete Sequence

936 bp assembled on 2010-02-09

GenBank Submission: KX806063

> BS17851.complete
GAAGTTATCAGTCGACATGAAGATCTTCTACGGAGCTCTGCTGGTGCTGG
GCACAGCAATTATTGCCCAGGCGGCTGTTGCCCGTTCCAACGACGAGTCC
GCCCAGGATACCGCCCAACAGTCCAAGTACCGCCTGTTCAAGCAGCCAGT
GCAGATCGAGGCACGCAGCTTACAGCAGCTTATGTCCCTGAAGAACCCAC
CTTGTCCTCCGGCAGCCACCACAACAACATCTGTGCCCACCACAACCACA
GTGACGACCTCACCCACTGGGCCCACTACCACAACTGGAACGTCCACAAC
AACCACCACACCCACGACAACTTCCACAAACCCTACCACCACCGCTCGTC
GCTCATTCAACCAGAACAATTTGGTCGACGGAAACGAGGACGACGACGAT
GAGGAGTTTGACCAGGATGTGGAGGAAGAGAAGTATCTGAAGGACGAGGA
TGAAGTGCAGGAGGACGACCAAGATGATGACGATAACGAGGACGACGGCT
TCCAGCTTGTGGCTCCCAAAGCCTCTGCATCCTCATCCTCTTCTATTCGC
CGTCGCAACAGCGCTAGCAGCTCCTACGGATCGTCCGGCAACAAGAATCT
GTCCAACAGCGAATTGATGCGCGAAATCGAACTGCGCCGGCAGAAGGAAC
TCAACGAGCAGCTGCGCAAGCAGCTTGCCAGCTCCCGTCGCCGTTCCAAC
CAGAGCCGCCGTCGTGCCCTAAACAAACGCCGTCGTGCCCTTCGCCGCCA
GCAGCAGAAGCGCCGCCGCCTGTCCCGTCGCCAGCAGCAGAAGCGTCGCT
CCCAGAACCGCCGTCATCGCAACGCCCGCCGCCGTCAGCGACGCAACAAT
CGCCTGAGCCGCCTCCGTCAGCGCCGTCGCGCCAACCGTCGCCGCAACTG
AAAGCTTTCTAGACCATTCGTTTGGCGCGCCTTTTA

BS17851.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:23:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG14422-RA 885 CG14422-PA 1..885 17..901 4425 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:23:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG14422-RA 1048 CG14422-RA 91..975 17..901 4425 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:23:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2943672..2944496 77..901 4125 100 Plus
X 23542271 X 2943476..2943536 17..77 305 100 Plus
Blast to na_te.dros performed 2014-11-28 04:23:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2436..2549 213..326 111 55.3 Plus

BS17851.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:09:41 Download gff for BS17851.complete
Subject Subject Range Query Range Percent Splice Strand
CG14422-RA 1..885 17..901 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:11 Download gff for BS17851.complete
Subject Subject Range Query Range Percent Splice Strand
CG14422-RA 91..977 17..905 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:37:39 Download gff for BS17851.complete
Subject Subject Range Query Range Percent Splice Strand
CG14422-RA 1..884 17..900 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:27:21 Download gff for BS17851.complete
Subject Subject Range Query Range Percent Splice Strand
CG14422-RA 91..977 17..905 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:27:21 Download gff for BS17851.complete
Subject Subject Range Query Range Percent Splice Strand
X 2943476..2943536 17..77 100 -> Plus
X 2943673..2944498 78..905 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:11 Download gff for BS17851.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2837509..2837569 17..77 100 -> Plus
arm_X 2837706..2838531 78..905 99   Plus

BS17851.3prime Sequence

898 bp (830 high quality bases) assembled on 2007-05-30

> BS17851.3prime
TAAAAGGCGCGCCAAACGAATGGTCTAGAAAGCTTTCAGCCCTGGCGACG
GTTGGCGCGACGGCGCTGACGGAGGCGGCTCAGGCGATTGTTGCGTCGCT
GACGGCGGCGGGCGTTGCGATGACGGCGGTTCTGGGAGCGACGCTTCTGC
TGCTGGCGACGGGACAGGCGGCGGCGCTTCTGCTGCTGGCGGCGAAGGGC
ACGACGGCGTTTGTTTAGGGCACGACGGCGGCTCTGGTTGGAACGGCGAC
GGGAGCTGGCAAGCTGCTTGCGCAGCTGCTCGTTGAGTTCCTTCTGCCGG
CGCAGTTCGATTTCGCGCATCAATTCGCTGTTGGACAGATTCTTGTTGCC
GGACGATCCGTAGGAGCTGCTAGCGCTGTTGCGACGGCGAATAGAAGAGG
ATGAGGATGCAGAGGCTTTGGGAGCCACAAGCTGGAAGCCGTCGTCCTCG
TTATCGTCATCATCTTGGTCGTCCTCCTGCACTTCATCCTCGTCCTTCAG
ATACTTCTCTTCCTCCACATCCTGGTCAAACTCCTCATCGTCGTCGTCCT
CGTTTCCGTCGACCAAATTGTTCTGGTTGAATGAGCGACGAGCGGTGGTG
GTAGGGTTTGTGGAAGTTGTCGTGGGTGTGGTGGTTGTTGTGGACGTTCC
AGTTGTGGTAGTGGGCCCAGTGGGTGAGGTCGTCACTGTGGTTGTGGTGG
GCACAGATGTTGTTGTGGTGGCTGCCGGAGGACAAGGTGGGTTCTTCAGG
GACATAAGCTGCTGTAAGCTGCGTGCCTCGATCTGCACTGGCTGCTTGAA
CAGGCGGTACTTGGACTGTTGGGCGGTATCCTGGGCGGACTCGTCGTTGG
AACGGGCAACAGCCGCCTGGGCAATAATTGCTGTGCCCAGCACCAGCA

BS17851.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:41:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG14422-PA 885 CG14422-RA 23..877 898..44 4275 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:16:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14422-RA 1048 CG14422-RA 113..967 898..44 4275 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:16:51
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2943672..2944488 860..44 4085 100 Minus
X 23542271 X 2943498..2943536 898..860 195 100 Minus
Blast to na_te.dros performed 2015-02-11 05:16:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2436..2549 724..611 111 55.3 Minus

BS17851.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:41:22 Download gff for BS17851.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14422-PA 24..885 36..897 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 09:48:36 Download gff for BS17851.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14422-RA 114..975 36..897 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:43:02 Download gff for BS17851.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14422-RA 114..975 36..897 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:43:02 Download gff for BS17851.3prime
Subject Subject Range Query Range Percent Splice Strand
X 2943499..2943536 860..897 100 -> Minus
X 2943673..2944496 36..859 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 09:48:36 Download gff for BS17851.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2837532..2837569 860..897 100 -> Minus
arm_X 2837706..2838529 36..859 99   Minus

BS17851.5prime Sequence

840 bp (777 high quality bases) assembled on 2007-05-30

> BS17851.5prime
GAAGTTATCACTTGACATGAAGATCTTCTACGGAGCTCTGCTGGTGCTGG
GCACAGCAATTATTGCCCAGGCGGCTGTTGCCCGTTCCAACGACGAGTCC
GCCCAGGATACCGCCCAACAGTCCAAGTACCGCCTGTTCAAGCAGCCAGT
GCAGATCGAGGCACGCAGCTTACAGCAGCTTATGTCCCTGAAGAACCCAC
CTTGTCCTCCGGCAGCCACCACAACAACATCTGTGCCCACCACAACCACA
GTGACGACCTCACCCACTGGGCCCACTACCACAACTGGAACGTCCACAAC
AACCACCACACCCACGACAACTTCCACAAACCCTACCACCACCGCTCGTC
GCTCATTCAACCAGAACAATTTGGTCGACGGAAACGAGGACGACGACGAT
GAGGAGTTTGACCAGGATGTGGAGGAAGAGAAGTATCTGAAGGACGAGGA
TGAAGTGCAGGAGGACGACCAAGATGATGACGATAACGAGGACGACGGCT
TCCAGCTTGTGGCTCCCAAAGCCTCTGCATCCTCATCCTCTTCTATTCGC
CGTCGCAACAGCGCTAGCAGCTCCTACGGATCGTCCGGCAACAAGAATCT
GTCCAACAGCGAATTGATGCGCGAAATCGAACTGCGCCGGCAGAAGGAAC
TCAACGAGCAGCTGCGCAAGCAGCTTGCCAGCTCCCGTCGCCGTTCCAAC
CAGAGCCGCCGTCGTGCCCTAAACAAACGCCGTCGTGCCCTTCGCCGCCA
GCAGCAGAAGCGCCGCCGCCTGTCCCGTCGCCAGCAGCAGAAGCGTCGCT
CCCAGAACCGCCGTCATCGCAACGCCCGCCGCCGTCAGCG

BS17851.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:41:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG14422-PA 885 CG14422-RA 1..824 17..840 4120 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:14:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG14422-RA 1048 CG14422-RA 91..914 17..840 4120 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:14:44
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2943672..2944435 77..840 3820 100 Plus
X 23542271 X 2943476..2943536 17..77 305 100 Plus
Blast to na_te.dros performed 2015-02-13 07:14:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2436..2549 213..326 111 55.3 Plus

BS17851.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:41:26 Download gff for BS17851.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14422-PA 1..824 17..840 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 01:07:17 Download gff for BS17851.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14422-RA 85..914 9..840 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:22:05 Download gff for BS17851.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14422-RA 85..914 9..840 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:22:05 Download gff for BS17851.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2943470..2943536 9..77 94 -> Plus
X 2943673..2944435 78..840 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 01:07:17 Download gff for BS17851.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2837503..2837569 9..77 94 -> Plus
arm_X 2837706..2838468 78..840 100   Plus

BS17851.pep Sequence

Translation from 16 to 900

> BS17851.pep
MKIFYGALLVLGTAIIAQAAVARSNDESAQDTAQQSKYRLFKQPVQIEAR
SLQQLMSLKNPPCPPAATTTTSVPTTTTVTTSPTGPTTTTGTSTTTTTPT
TTSTNPTTTARRSFNQNNLVDGNEDDDDEEFDQDVEEEKYLKDEDEVQED
DQDDDDNEDDGFQLVAPKASASSSSSIRRRNSASSSYGSSGNKNLSNSEL
MREIELRRQKELNEQLRKQLASSRRRSNQSRRRALNKRRRALRRQQQKRR
RLSRRQQQKRRSQNRRHRNARRRQRRNNRLSRLRQRRRANRRRN*

BS17851.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:59:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG14422-PA 294 CG14422-PA 1..294 1..294 1472 100 Plus
CG14420-PA 293 CG14420-PA 4..293 8..294 338 33.7 Plus
CG14421-PA 238 CG14421-PA 61..232 66..293 324 40.2 Plus
CG14423-PA 305 CG14423-PA 36..301 14..291 174 25.8 Plus
CG2839-PA 826 CG2839-PA 483..658 124..293 165 23.3 Plus