Clone Sequence Records
BS17858.complete Sequence
1961 bp assembled on 2009-12-07
GenBank Submission: KX801185
> BS17858.complete
GAAGTTATCAGTCGACATGCCTGCTATTGGAATCGATCTGGGCACCACCT
ACTCCTGCGTGGGTGTCTACCAACATGGCAAGGTGGAGATTATCGCCAAC
GACCAGGGCAACCGCACCACGCCGTCCTACGTGGCTTTCACAGATTCGGA
ACGCCTCATCGGCGATCCGGCTAAGAACCAGGTGGCCATGAACCCCAGAA
ACACAGTGTTTGACGCCAAGCGACTGATCGGCCGAAAATACGACGACCCC
AAGATCGCAGAGGACATGAAGCACTGGCCTTTCAAGGTTGTAAGCGACGG
CGGAAAGCCCAAGATCGGGGTGGAGTATAAGGGTGAGTCCAAGAGATTTG
CCCCCGAGGAGATCAGCTCGATGGTACTGACCAAGATGAAGGAGACGGCG
GAGGCATATCTGGGCGAGAGCATCACAGACGCAGTCATCACAGTTCCAGC
CTACTTCAACGACTCCCAGCGCCAGGCTACCAAAGACGCCGGTCACATCG
CCGGCCTGAATGTGCTCCGCATCATCAATGAGCCCACGGCGGCAGCACTG
GCCTACGGACTGGACAAGAACCTCAAGGGTGAGCGCAATGTGCTTATCTT
CGACTTGGGCGGCGGCACCTTCGATGTCTCCATCCTGACCATCGACGAGG
GATCACTGTTCGAGGTGCGCTCCACCGCCGGAGACACACACTTGGGCGGC
GAGGACTTTGACAACCGGCTAGTCACTCATCTGGCGGACGAGTTCAAGCG
CAAGTACAAGAAGGATCTGCGCTCCAACCCTCGCGCCCTACGACGCCTCA
GAACAGCAGCTGAACGGGCCAAGCGCACACTCTCCTCCAGCACGGAGGCC
ACCATCGAGATTGACGCACTGTTTGAGGGCCAAGACTTCTACACCAAAGT
GAGCCGCGCCAGGTTTGAGGAGCTGTGCGCGGACCTCTTCCGCAACACCC
TGCAGCCTGTGGAGAAGGCCCTCAACGATGCCAAGATGGATAAGGGTCAG
ATCCACGACATCGTGCTCGTCGGCGGATCCACTCGCATTCCCAAGGTGCA
AAGTCTGCTGCAGGACTTCTTCCACGGCAAGAACCTCAACCTATCCATCA
ACCCAGACGAGGCAGTTGCATACGGAGCTGCTGTGCAGGCCGCTATCCTC
AGCGGAGACCAGAGCGGCAAGATCCAGGACGTGCTGCTGGTGGACGTGGC
CCCACTTTCATTGGGAATTGAGACCGCTGGAGGTGTAATGACCAAGCTGA
TCGAGCGCAACTGCCGCATTCCGTGCAAGCAGACTAAGACGTTCTCCACA
TACGCGGACAACCAGCCCGGAGTCTCCATTCAGGTGTATGAGGGCGAACG
TGCGATGACGAAGGACAACAATGCATTGGGCACCTTCGATCTGTCCGGCA
TTCCACCTGCACCAAGGGGTGTGCCCCAGATAGAAGTTACCTTCGACTTG
GACGCCAATGGAATCCTGAACGTCAGCGCCAAGGAGATGAGCACGGGCAA
GGCCAAGAACATCACGATCAAGAACGACAAGGGACGGCTCTCGCAGGCCG
AGATTGATCGCATGGTGAACGAGGCTGAAAAGTACGCCGACGAGGACGAG
AAGCATCGCCAGCGAATAACCTCTAGAAATGCCCTGGAGAGCTACGTCTT
CAATGTGAAGCAGGCCGTGGAACAGGCACCTGCTGGCAAATTGGACGAGG
CTGACAAGAACTCCGTCTTGGACAAGTGCAACGACACTATCCGGTGGCTG
GACAGCAACACCACTGCCGAGAAGGAGGAGTTCGACCACAAGCTGGAGGA
GCTCACCCGCCACTGCTCCCCCATCATGACCAAGATGCATCAGCAGGGTG
CGGGAGCTGGAGCTGGTGGTCCGGGAGCAAACTGCGGCCAGCAGGCGGGA
GGATTTGGAGGCTACTCTGGACCCACGGTCGAGGAGGTCGACTAAAAGCT
TTCTAGACCAT
BS17858.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:02:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp70Ab-RA | 1929 | CG18743-PA | 1..1929 | 17..1945 | 9645 | 100 | Plus |
| Hsp70Aa-RA | 1929 | CG31366-PA | 1..1929 | 17..1945 | 9645 | 100 | Plus |
| Hsp70Bc-RA | 1926 | CG6489-PA | 1..1926 | 17..1945 | 8530 | 96.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:02:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp70Ab-RA | 2375 | CG18743-RA | 255..2183 | 17..1945 | 9645 | 100 | Plus |
| Hsp70Aa-RA | 2382 | CG31366-RA | 256..2184 | 17..1945 | 9645 | 100 | Plus |
| Hsp70Bc-RA | 2386 | CG6489-RA | 243..2169 | 17..1946 | 8535 | 96.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:02:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11954361..11956289 | 1945..17 | 9645 | 100 | Minus |
| 3R | 32079331 | 3R | 11958789..11960717 | 17..1945 | 9645 | 100 | Plus |
| 3R | 32079331 | 3R | 12506035..12507961 | 17..1946 | 8535 | 96.3 | Plus |
| 3R | 32079331 | 3R | 12509318..12511244 | 17..1946 | 8535 | 96.3 | Plus |
| 3R | 32079331 | 3R | 12502752..12504678 | 17..1946 | 8520 | 96.2 | Plus |
| 3R | 32079331 | 3R | 12465631..12467557 | 1946..17 | 8490 | 96.1 | Minus |
| 3R | 32079331 | 3R | 24055507..24057104 | 1614..17 | 3235 | 80.2 | Minus |
| 3R | 32079331 | 3R | 15244372..15245954 | 20..1605 | 1925 | 74.9 | Plus |
| 3R | 32079331 | 3R | 13045581..13047002 | 178..1599 | 1620 | 74.3 | Plus |
| 3L | 28110227 | 3L | 13975966..13977165 | 262..1464 | 910 | 71.9 | Plus |
| 3L | 28110227 | 3L | 13974590..13974767 | 27..204 | 470 | 84.3 | Plus |
| X | 23542271 | X | 11803871..11804160 | 645..353 | 470 | 78.2 | Minus |
| 3R | 32079331 | 3R | 13044979..13045131 | 32..184 | 360 | 82.4 | Plus |
| X | 23542271 | X | 11803040..11803313 | 1485..1212 | 335 | 74.8 | Minus |
| 2R | 25286936 | 2R | 14254844..14254973 | 567..438 | 305 | 82.3 | Minus |
| X | 23542271 | X | 11803379..11803619 | 1140..900 | 230 | 73 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:02:10 has no hits.
BS17858.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:44:45 Download gff for
BS17858.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp70Ab-RA | 237..2163 | 17..1943 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:04:12 Download gff for
BS17858.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp70Aa-RA | 256..2182 | 17..1943 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:11:28 Download gff for
BS17858.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp70Ab-RA | 237..2163 | 17..1943 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:02:27 Download gff for
BS17858.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp70Aa-RA | 256..2182 | 17..1943 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:02:27 Download gff for
BS17858.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11958789..11960715 | 17..1943 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:04:12 Download gff for
BS17858.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7784511..7786437 | 17..1943 | 100 | | Plus |
BS17858.3prime Sequence
882 bp (855 high quality bases) assembled on 2007-05-30
> BS17858.3prime
ATGGTCTAGAAAGCTTTTAGCCCTTCTCCTCGACCGTGGGTCCAGAGTAG
CCTCCAAATCCTCCCGCCTGCTGGCCGCAGTTTGCTCCCGGACCACCAGC
TCCAGCTCCCGCACCCTGCTGATGCATCTTGGTCATGATGGGGGAGCAGT
GGCGGGTGAGCTCCTCCAGCTTGTGGTCGAACTCCTCCTTCTCGGCAGTG
GTGTTGCTGTCCAGCCACCGGATAGTGTCGTTGCACTTGTCCAAGACGGA
GTTCTTGTCAGCCTCGTCCAATTTGCCAGCAGGTGCCTGTTCCACGGCCT
GCTTCACATTGAAGACGTAGCTCTCCAGGGCATTTCTAGAGGTTATTCGC
TGGCGATGCTTCTCGTCCTCGTCGGCGTACTTTTCAGCCTCGTTCACCAT
GCGATCAATCTCGGCCTGCGAGAGCCGTCCCTTGTCGTTCTTGATCGTGA
TGTTCTTGGCCTTGCCCGTGCTCATCTCCTTGGCGCTGACGTTCAGGATT
CCATTGGCGTCCAAGTCGAAGGTAACTTCTATCTGGGGCACACCCCTTGG
TGCAGGTGGAATGCCGGACAGATCGAAGGTGCCCAATGCATTGTTGTCCT
TCGTCATCGCACGTTCGCCCTCATACACCTGAATGGAGACTCCGGGCTGG
TTGTCCGCGTATGTGGAGAACGTCTTAGTCTGCTTGCACGGAATGCGGCA
GTTGCGCTCGATCAGCTTGGTCATTACACCTCCAGCGGTCTCAATTCCCA
ATGAAAGTGGGGCCACGTCCACCAGCAGCACGTCCTGGATCTTGCCGCTC
TGGTCTCCGCTGAGGATAGCGGCCTGCACAGCAGCTCCGTATGCAACTGC
CTCGTCTGGGGTGATGGATAGGTTGAGGTTCT
BS17858.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:42:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18743-PA | 1929 | Hsp70Ab-RA | 1064..1920 | 882..26 | 4260 | 99.8 | Minus |
| CG31366-PA | 1929 | Hsp70Aa-RA | 1064..1920 | 882..26 | 4260 | 99.8 | Minus |
| CG6489-PA | 1926 | Hsp70Bc-RA | 1064..1841 | 882..105 | 3140 | 96.1 | Minus |
| CG5834-PA | 1926 | Hsp70Bbb-RA | 1064..1841 | 882..105 | 3140 | 96.1 | Minus |
| CG31359-PA | 1926 | Hsp70Bb-RA | 1064..1841 | 882..105 | 3115 | 96 | Minus |
| CG31449-PA | 1926 | Hsp70Ba-RA | 1066..1841 | 880..105 | 3080 | 95.8 | Minus |
| CG6489-PA | 1926 | Hsp70Bc-RA | 1842..1917 | 101..26 | 205 | 90.7 | Minus |
| CG5834-PA | 1926 | Hsp70Bbb-RA | 1842..1917 | 101..26 | 205 | 90.7 | Minus |
| CG31359-PA | 1926 | Hsp70Bb-RA | 1842..1917 | 101..26 | 205 | 90.7 | Minus |
| CG31449-PA | 1926 | Hsp70Ba-RA | 1842..1917 | 101..26 | 205 | 90.7 | Minus |
| CG5436-PA | 1908 | Hsp68-RA | 1222..1266 | 724..680 | 150 | 93.3 | Minus |
| CG5436-PA | 1908 | Hsp68-RA | 1730..1762 | 213..181 | 140 | 96.9 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:56:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp70Ab-RA | 2375 | CG18743-RA | 1318..2174 | 882..26 | 4270 | 99.9 | Minus |
| Hsp70Aa-RA | 2382 | CG31366-RA | 1319..2175 | 882..26 | 4270 | 99.9 | Minus |
| Hsp70Bc-RA | 2386 | CG6489-RA | 1306..2159 | 882..26 | 3675 | 95.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:56:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11954370..11955226 | 26..882 | 4270 | 99.9 | Plus |
| 3R | 32079331 | 3R | 11959852..11960708 | 882..26 | 4270 | 99.9 | Minus |
| 3R | 32079331 | 3R | 12503815..12504668 | 882..26 | 3650 | 95.3 | Minus |
| 3R | 32079331 | 3R | 12510381..12511234 | 882..26 | 3650 | 95.3 | Minus |
| 3R | 32079331 | 3R | 12507098..12507951 | 882..26 | 3635 | 95.2 | Minus |
| 3R | 32079331 | 3R | 12465641..12466492 | 26..880 | 3610 | 95.1 | Plus |
| 3R | 32079331 | 3R | 24055507..24056041 | 348..882 | 1010 | 79.3 | Plus |
| 3R | 32079331 | 3R | 13046573..13047002 | 792..363 | 545 | 75.1 | Minus |
| 3R | 32079331 | 3R | 15245524..15245954 | 787..357 | 535 | 74.9 | Minus |
| X | 23542271 | X | 11803040..11803313 | 477..750 | 335 | 74.8 | Plus |
Blast to na_te.dros performed on 2015-02-12 04:56:46 has no hits.
BS17858.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:42:21 Download gff for
BS17858.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31366-PA | 1064..1929 | 17..882 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:15:23 Download gff for
BS17858.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp70Aa-RA | 1319..2184 | 17..882 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:09:18 Download gff for
BS17858.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp70Aa-RA | 1319..2184 | 17..882 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:09:18 Download gff for
BS17858.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11954361..11955226 | 17..882 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:15:23 Download gff for
BS17858.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7780083..7780948 | 17..882 | 99 | | Plus |
BS17858.5prime Sequence
879 bp (810 high quality bases) assembled on 2007-05-30
> BS17858.5prime
GAAGTTATCACTCTACATGCCTGCTATTGGAATCGATCTGGGCACCACCT
ACTCCTGCGTGGGTGTCTACCAACATGGCAAGGTGGAGATTATCGCCAAC
GACCAGGGCAACCGCACCACGCCGTCCTACGTGGCTTTCACAGATTCGGA
ACGCCTCATCGGCGATCCGGCTAAGAACCAGGTGGCCATGAACCCCAGAA
ACACAGTGTTTGACGCCAAGCGACTGATCGGCCGAAAATACGACGACCCC
AAGATCGCAGAGGACATGAAGCACTGGCCTTTCAAGGTTGTAAGCGACGG
CGGAAAGCCCAAGATCGGGGTGGAGTATAAGGGTGAGTCCAAGAGATTTG
CCCCCGAGGAGATCAGCTCGATGGTACTGACCAAGATGAAGGAGACGGCG
GAGGCATATCTGGGCGAGAGCATCACAGACGCAGTCATCACAGTTCCAGC
CTACTTCAACGACTCCCAGCGCCAGGCTACCAAAGACGCCGGTCACATCG
CCGGCCTGAATGTGCTCCGCATCATCAATGAGCCCACGGCGGCAGCACTG
GCCTACGGACTGGACAAGAACCTCAAGGGTGAGCGCAATGTGCTTATCTT
CGACTTGGGCGGCGGCACCTTCGATGTCTCCATCCTGACCATCGACGAGG
GATCACTGTTCGAGGTGCGCTCCACCGCCGGAGACACACACTTGGGCGGC
GAGGACTTTGACAACCGGCTAGTCACTCATCTGGCGGACGAGTTCAAGCG
CAAGTACAAGAAGGATCTGCGCTCCAACCCTCGCGCCCTACGACGCCTCA
GAACAGCAGCTGAACGGGCCAAGCGCACACTCTCCTCCAGCACGGANGCC
ACCATCGAGATTGACGCACTGTTTGANGG
BS17858.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:42:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18743-PA | 1929 | Hsp70Ab-RA | 1..860 | 17..876 | 4281 | 99.8 | Plus |
| CG31366-PA | 1929 | Hsp70Aa-RA | 1..860 | 17..876 | 4281 | 99.8 | Plus |
| CG6489-PA | 1926 | Hsp70Bc-RA | 1..860 | 17..876 | 3581 | 96.6 | Plus |
| CG31359-PA | 1926 | Hsp70Bb-RA | 1..860 | 17..876 | 3581 | 96.6 | Plus |
| CG31449-PA | 1926 | Hsp70Ba-RA | 1..860 | 17..876 | 3556 | 96.5 | Plus |
| CG5834-PA | 1926 | Hsp70Bbb-RA | 1..860 | 17..876 | 3531 | 96.3 | Plus |
| CG7756-PA | 1902 | Hsc70-2-RA | 514..660 | 521..667 | 310 | 88.4 | Plus |
| CG5436-PA | 1908 | Hsp68-RA | 493..596 | 509..612 | 220 | 88.4 | Plus |
| CG5436-PA | 1908 | Hsp68-RA | 610..701 | 626..717 | 185 | 88 | Plus |
| CG5436-PA | 1908 | Hsp68-RA | 412..461 | 428..477 | 175 | 94 | Plus |
| CG8937-PA | 1926 | Hsc70-1-RA | 67..116 | 74..123 | 175 | 94 | Plus |
| CG4264-PE | 1956 | Hsc70-4-RE | 32..101 | 39..108 | 175 | 90 | Plus |
| CG4264-PF | 1956 | Hsc70-4-RF | 32..101 | 39..108 | 175 | 90 | Plus |
| CG4264-PA | 1956 | Hsc70-4-RA | 32..101 | 39..108 | 175 | 90 | Plus |
| CG4264-PC | 1956 | Hsc70-4-RC | 32..101 | 39..108 | 175 | 90 | Plus |
| CG4264-PD | 1956 | Hsc70-4-RD | 32..101 | 39..108 | 175 | 90 | Plus |
| CG4264-PB | 1956 | Hsc70-4-RB | 32..101 | 39..108 | 175 | 90 | Plus |
| CG7756-PA | 1902 | Hsc70-2-RA | 338..381 | 345..388 | 170 | 95.4 | Plus |
| CG5436-PA | 1908 | Hsp68-RA | 724..770 | 740..786 | 160 | 93.6 | Plus |
| CG4264-PE | 1956 | Hsc70-4-RE | 574..630 | 581..637 | 160 | 91.2 | Plus |
| CG4264-PF | 1956 | Hsc70-4-RF | 574..630 | 581..637 | 160 | 91.2 | Plus |
| CG4264-PA | 1956 | Hsc70-4-RA | 574..630 | 581..637 | 160 | 91.2 | Plus |
| CG4264-PC | 1956 | Hsc70-4-RC | 574..630 | 581..637 | 160 | 91.2 | Plus |
| CG4264-PD | 1956 | Hsc70-4-RD | 574..630 | 581..637 | 160 | 91.2 | Plus |
| CG4264-PB | 1956 | Hsc70-4-RB | 574..630 | 581..637 | 160 | 91.2 | Plus |
| CG4147-PB | 1971 | Hsc70-3-RB | 667..713 | 599..645 | 160 | 93.6 | Plus |
| CG4147-PA | 1971 | Hsc70-3-RA | 667..713 | 599..645 | 160 | 93.6 | Plus |
| CG4147-PD | 1971 | Hsc70-3-RD | 667..713 | 599..645 | 160 | 93.6 | Plus |
| CG4147-PC | 1971 | Hsc70-3-RC | 667..713 | 599..645 | 160 | 93.6 | Plus |
| CG7756-PA | 1902 | Hsc70-2-RA | 71..116 | 78..123 | 155 | 93.4 | Plus |
| CG5436-PA | 1908 | Hsp68-RA | 337..380 | 353..396 | 145 | 93.1 | Plus |
| CG5436-PA | 1908 | Hsp68-RA | 10..47 | 26..63 | 140 | 94.7 | Plus |
| CG7756-PA | 1902 | Hsc70-2-RA | 154..185 | 161..192 | 135 | 96.8 | Plus |
| CG8937-PA | 1926 | Hsc70-1-RA | 445..476 | 452..483 | 135 | 96.8 | Plus |
| CG8937-PA | 1926 | Hsc70-1-RA | 124..185 | 131..192 | 135 | 88.7 | Plus |
| CG8937-PC | 1668 | Hsc70-1-RC | 187..218 | 452..483 | 135 | 96.8 | Plus |
| CG8937-PD | 1668 | Hsc70-1-RD | 187..218 | 452..483 | 135 | 96.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:04:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp70Ab-RA | 2375 | CG18743-RA | 255..1114 | 17..876 | 4289 | 99.9 | Plus |
| Hsp70Aa-RA | 2382 | CG31366-RA | 256..1115 | 17..876 | 4289 | 99.9 | Plus |
| Hsp70Bc-RA | 2386 | CG6489-RA | 243..1102 | 17..876 | 3869 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:04:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11955430..11956289 | 876..17 | 4289 | 99.9 | Minus |
| 3R | 32079331 | 3R | 11958789..11959648 | 17..876 | 4289 | 99.9 | Plus |
| 3R | 32079331 | 3R | 12506035..12506894 | 17..876 | 3869 | 96.6 | Plus |
| 3R | 32079331 | 3R | 12509318..12510177 | 17..876 | 3869 | 96.6 | Plus |
| 3R | 32079331 | 3R | 12466698..12467557 | 876..17 | 3854 | 96.5 | Minus |
| 3R | 32079331 | 3R | 12502752..12503611 | 17..876 | 3839 | 96.4 | Plus |
| 3R | 32079331 | 3R | 24056249..24057104 | 872..17 | 1779 | 80.5 | Minus |
| 3R | 32079331 | 3R | 15244372..15245118 | 20..769 | 1210 | 77.7 | Plus |
| 3R | 32079331 | 3R | 13045581..13046163 | 178..760 | 1025 | 78.4 | Plus |
| 3L | 28110227 | 3L | 13975966..13976562 | 262..861 | 479 | 72.3 | Plus |
| 3L | 28110227 | 3L | 13974590..13974767 | 27..204 | 470 | 84.3 | Plus |
| X | 23542271 | X | 11803871..11804160 | 645..353 | 470 | 78.2 | Minus |
| 3R | 32079331 | 3R | 13044979..13045131 | 32..184 | 360 | 82.4 | Plus |
Blast to na_te.dros performed on 2015-02-13 06:04:04 has no hits.
BS17858.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:42:27 Download gff for
BS17858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18743-PA | 1..862 | 17..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 19:10:01 Download gff for
BS17858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp70Aa-RA | 247..1117 | 8..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:15:10 Download gff for
BS17858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp70Aa-RA | 247..1117 | 8..879 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:15:10 Download gff for
BS17858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11958780..11959650 | 8..879 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 19:10:01 Download gff for
BS17858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7784502..7785372 | 8..879 | 99 | | Plus |
BS17858.pep Sequence
Translation from 16 to 1944
> BS17858.pep
MPAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGD
PAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKI
GVEYKGESKRFAPEEISSMVLTKMKETAEAYLGESITDAVITVPAYFNDS
QRQATKDAGHIAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFDLGGG
TFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLADEFKRKYKKD
LRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARF
EELCADLFRNTLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQD
FFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLG
IETAGGVMTKLIERNCRIPCKQTKTFSTYADNQPGVSIQVYEGERAMTKD
NNALGTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAKEMSTGKAKNIT
IKNDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQA
VEQAPAGKLDEADKNSVLDKCNDTIRWLDSNTTAEKEEFDHKLEELTRHC
SPIMTKMHQQGAGAGAGGPGANCGQQAGGFGGYSGPTVEEVD*
BS17858.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:36:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp70Ab-PA | 642 | CG18743-PA | 1..642 | 1..642 | 3301 | 100 | Plus |
| Hsp70Aa-PA | 642 | CG31366-PA | 1..642 | 1..642 | 3301 | 100 | Plus |
| Hsp70Bc-PA | 641 | CG6489-PA | 1..641 | 1..642 | 3263 | 98.9 | Plus |
| Hsp70Bb-PA | 641 | CG31359-PA | 1..641 | 1..642 | 3263 | 98.9 | Plus |
| Hsp70Bbb-PA | 641 | CG5834-PA | 1..641 | 1..642 | 3256 | 98.8 | Plus |
