Clone Sequence Records
BS17859.3prime Sequence
903 bp (837 high quality bases) assembled on 2007-05-30
> BS17859.3prime
ATGGTCTAGAAAGCTTCTAGACCTCGGTGCCATCCTCGCCCTCGTCGTCG
AAGAGCTGGCTGGTGCTGCCCTGGCCGCTGCGCGTCGTCGTCACGGACAT
CTTCTTCTTGGGCTTCGGTGGTGGGCGTGGTGGGATCTTGGCGGCCTTCG
GAGAGTCACCGCTGCTGCTGGCGTGGCTTGGCGATACGGCGGCACCCGAG
CCGGGTGAAAGGTAGGCGGCGTGGCCCAGTCCGGCACCGCTAATGCTCGA
GCCGGGCAGTATCGTGATCCCCTGTTGCCGAACTCCGTACAGGGGTTCCG
TGTCCATGGAGCCCAGTCGCTGCTGCTGCTGCTGTTGTTGTTGTTGCAAC
TGCTGTTGCTGCTGAATCAGCTCGTGTATGGGCTCGTAAATCTTACTGGC
ATTGGTCGCCGAGGACACCGATGTCAGGCTGGGCGTGGCCGGAAGTGGTC
GGTCCCGCATCGAGTACTGCTGACCAGCGCCCCCCTGTGAGCCGGCGATC
TTGGTCAGATTGAGGGTGGAGTTGCCGCCGGCAGTGGTTCGCAATCCCAA
GTTGTCGTACACTGGCTCCGCCTGCAGTTCCGCGGTGGTGGCGGTGCCAG
TCTCGCTGGGATTCGGCGATGTGGGGCTCTGGAATTCACTTAGCTGAATG
GATCCGTGGCCAGCGGCACCGGAAGTACTGGGCGCCCAGCTGGGAGCGCG
CGGCTTGCGCGGAATGGTCATATATCCCTGTTTCATGACCACACCCGTGG
CCGGCGAATAGACGACGGGTGCGGGCAGGAAGGGCGATGTGGTGGCCAGC
GGATGTTGCTGCTGCTGCTGCTGTTGTTGTTGCTGCTGGTGGTGGTGGTG
GTGCTGCTGCTGCTGCTGCAGCTGATGGTGGTGCTGGTGCTGGCGACTGC
TGT
BS17859.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:42:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12199-PB | 2796 | kek5-RB | 1910..2796 | 903..17 | 4435 | 100 | Minus |
| CG12199-PA | 2796 | kek5-RA | 1910..2796 | 903..17 | 4435 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:37:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek5-RD | 6284 | CG12199-RD | 3034..3920 | 903..17 | 4435 | 100 | Minus |
| kek5-RC | 4544 | CG12199-RC | 3167..4053 | 903..17 | 4435 | 100 | Minus |
| kek5-RA | 4374 | CG12199-RA | 2997..3883 | 903..17 | 4435 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:37:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19468664..19469550 | 903..17 | 4435 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:37:18 has no hits.
BS17859.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:42:31 Download gff for
BS17859.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12199-PA | 1910..2796 | 17..903 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 21:53:11 Download gff for
BS17859.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 2997..3886 | 10..903 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:13:20 Download gff for
BS17859.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 2997..3886 | 10..903 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:13:20 Download gff for
BS17859.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19468664..19469553 | 10..903 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 21:53:11 Download gff for
BS17859.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19362697..19363586 | 10..903 | 99 | | Minus |
BS17859.5prime Sequence
874 bp (832 high quality bases) assembled on 2007-05-30
> BS17859.5prime
GAAGTTATCACTCTACATGATGGGCAACAGAACGGAACGAAGCGGACGAC
GACTGGGGATGATCCTTCTGCTGCTGGGTGTGCTAGTGGTTCTAATGGCC
CTACCGCCGCCCACCGCAGGCACCACCGATTGGATGCAGAGCTGCGGTAC
ATGCCACTGTCAGTGGAATTCGGGCAAGAAGAGCGCCGACTGCAAGAACA
AGGCGCTAACCAAAATTCCGCAGGACATGAGCAACGAGATGCAGGTGCTG
GACTTTGCCCACAATCAAATACCCGAGCTGCGGCGCGAAGAGTTCCTACT
GGCCGGTCTGCCCAATGTGCACAAGATCTTTTTGCGCAACTGCACCATCC
AGGAGGTGCATCGCGAGGCCTTCAAGGGTCTGCATATCCTAATCGAGCTG
GACCTGTCGGGCAATCGGATACGGGAACTGCATCCGGGCACTTTCGCCGG
CCTGGAGAAGCTGCGCAACGTGATCATCAACAACAACGAGATCGAGGTGC
TGCCCAACCATCTGTTCGTCAACCTGAGCTTCCTGTCGCGCATCGAGTTC
CGGAACAATCGATTGCGCCAGGTGCAGCTGCACGTCTTCGCTGGCACAAT
GGCGCTGAGCGCCATTTCGCTGGAACAGAACCGCCTCTCACATCTGCACA
AGGAGACATTCAAGGATCTGCAGAAGCTGATGCATCTATCGCTGCAGGGT
AACGCATGGAACTGCAGCTGCGAGCTGCAGGACTTTCGCGACTTTGCGAT
CAGCAAACGGCTCTACACACCGCCCACCGATTGCCAGGAGCCGCCACAGC
TGCGCGGCAAGCTGTGGAGCGAGGTGCCATCGGAGAACTTCGCCTGCCGG
CCGCGCATTTTGGGTTCCGTGCGC
BS17859.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:42:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12199-PB | 2796 | kek5-RB | 1..858 | 17..874 | 4290 | 100 | Plus |
| CG12199-PA | 2796 | kek5-RA | 1..858 | 17..874 | 4290 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:48:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek5-RD | 6284 | CG12199-RD | 1125..1982 | 17..874 | 4290 | 100 | Plus |
| kek5-RC | 4544 | CG12199-RC | 1258..2115 | 17..874 | 4290 | 100 | Plus |
| kek5-RA | 4374 | CG12199-RA | 1088..1945 | 17..874 | 4290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:48:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19464670..19465527 | 17..874 | 4290 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 23:48:22 has no hits.
BS17859.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:42:35 Download gff for
BS17859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12199-PA | 1..858 | 17..874 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:21:55 Download gff for
BS17859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1088..1945 | 17..874 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:23:53 Download gff for
BS17859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1088..1945 | 17..874 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:23:53 Download gff for
BS17859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19464670..19465527 | 17..874 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:21:55 Download gff for
BS17859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19358703..19359560 | 17..874 | 100 | | Plus |
BS17859.complete Sequence
2828 bp assembled on 2009-12-07
GenBank Submission: KX800454
> BS17859.complete
GAAGTTATCAGTCGACATGATGGGCAACAGAACGGAACGAAGCGGACGAC
GACTGGGGATGATCCTTCTGCTGCTGGGTGTGCTAGTGGTTCTAATGGCC
CTACCGCCGCCCACCGCAGGCACCACCGATTGGATGCAGAGCTGCGGTAC
ATGCCACTGTCAGTGGAATTCGGGCAAGAAGAGCGCCGACTGCAAGAACA
AGGCGCTAACCAAAATTCCGCAGGACATGAGCAACGAGATGCAGGTGCTG
GACTTTGCCCACAATCAAATACCCGAGCTGCGGCGCGAAGAGTTCCTACT
GGCCGGTCTGCCCAATGTGCACAAGATCTTTTTGCGCAACTGCACCATCC
AGGAGGTGCATCGCGAGGCCTTCAAGGGTCTGCATATCCTAATCGAGCTG
GACCTGTCGGGCAATCGGATACGGGAACTGCATCCGGGCACTTTCGCCGG
CCTGGAGAAGCTGCGCAACGTGATCATCAACAACAACGAGATCGAGGTGC
TGCCCAACCATCTGTTCGTCAACCTGAGCTTCCTGTCGCGCATCGAGTTC
CGGAACAATCGATTGCGCCAGGTGCAGCTGCACGTCTTCGCTGGCACAAT
GGCGCTGAGCGCCATTTCGCTGGAACAGAACCGCCTCTCACATCTGCACA
AGGAGACATTCAAGGATCTGCAGAAGCTGATGCATCTATCGCTGCAGGGT
AACGCATGGAACTGCAGCTGCGAGCTGCAGGACTTTCGCGACTTTGCGAT
CAGCAAACGGCTCTACACACCGCCCACCGATTGCCAGGAGCCGCCACAGC
TGCGCGGCAAGCTGTGGAGCGAGGTGCCATCGGAGAACTTCGCCTGCCGG
CCGCGCATTTTGGGTTCCGTGCGCTCCTTCATCGAGGCCAATCACGACAA
TATCTCGCTACCCTGCCGCATTGTCGGCAGTCCGCGTCCCAATGTCACCT
GGGTGTACAACAAGCGGCCATTGCAGCAGTACGACCCGCGTGTGCGTGTC
CTCACCTCCGTGGAACAGATGCCGGAGCAGCCCTCCCAGGTGCTCACCTC
GGAGCTGCGCATCGTGGGCGTACGGGCCTCCGACAAGGGTGCCTACACCT
GTGTGGCGGATAACCGGGGCGGACGGGCGGAGGCCGAGTTCCAGCTGCTC
GTGAGCGGTGACTATGCCGGCGCGGTATCCGCCTCCGATGGCATGGGCAT
GGGCGCCATTGGGGCACCAACCATTGATCCGCAAACGAACATGTTTCTCA
TCATCTGTCTAATCATTACGACGCTGCTGCTCCTGCTGCTCGTGGCGGTG
CTGACGCTCTTCTGGTACTGCCGTCGCATCAAGACCTATCAAAAGGACAC
CACCATGATGAGCGGCGACGGGCTGATCTCTTCCAAGATGGACAAGACGC
ACAACGGCTCCATGCTCGAGGGTTCCGTCATCATGGAGATGCAGAAGAGC
CTGCTCAACGAGGTCAATCCAGTCGAGAAGCCGCCACGGCGCACGGACAT
CGAGAGCGTGGATGGTGGCGATGACGTGCTCGAGATCAAGAAGACGCTGC
TCGACGACACCGTCTATGTGGCCAATCACTCGCGCGACGAAGAAGCCGTC
TCAGTGGCCATGTCGGATACGACGACCACGCCCCGATCTCGACACACCTA
CGTGGATGATGCGTATGCCAATAGCTTGCCACCGGATCTGCTGGCCTTTC
CCGCTCGCGTGCCGCCCACCTCGCCCTCGATGCAATCGTCGCAGTCGAAC
ATACCCGACCAGGTGATCTACGGCATCCGTTCGCCACCGTCGCTAACCAG
TCCGGTCTACACGCATATGACGCCGCACGGCATCTACGGCACCAAGACGA
TGACGGCTCCGCATAACGGCTTTATGACGCTGCAGCATCCCAAGTCGCGC
AACCTGGCGCTCATTGCCACCACCAACAGCAGTCGCCAGCACCAGCACCA
CCATCAGCTGCAGCAGCAGCAGCAGCACCACCACCACCACCAGCAGCAAC
AACAACAGCAGCAGCAGCAGCAACATCCGCTGGCCACCACATCGCCCTTC
CTGCCCGCACCCGTCGTCTATTCGCCGGCCACGGGTGTGGTCATGAAACA
GGGATATATGACCATTCCGCGCAAGCCGCGCGCTCCCAGCTGGGCGCCCA
GTACTTCCGGTGCCGCTGGCCACGGATCCATTCAGCTAAGTGAATTCCAG
AGCCCCACATCGCCGAATCCCAGCGAGACTGGCACCGCCACCACCGCGGA
ACTGCAGGCGGAGCCAGTGTACGACAACTTGGGATTGCGAACCACTGCCG
GCGGCAACTCCACCCTCAATCTGACCAAGATCGCCGGCTCACAGGGGGGC
GCTGGTCAGCAGTACTCGATGCGGGACCGACCACTTCCGGCCACGCCCAG
CCTGACATCGGTGTCCTCGGCGACCAATGCCAGTAAGATTTACGAGCCCA
TACACGAGCTGATTCAGCAGCAACAGCAGTTGCAACAACAACAACAGCAG
CAGCAGCAGCGACTGGGCTCCATGGACACGGAACCCCTGTACGGAGTTCG
GCAACAGGGGATCACGATACTGCCCGGCTCGAGCATTAGCGGTGCCGGAC
TGGGCCACGCCGCCTACCTTTCACCCGGCTCGGGTGCCGCCGTATCGCCA
AGCCACGCCAGCAGCAGCGGTGACTCTCCGAAGGCCGCCAAGATCCCACC
ACGCCCACCACCGAAGCCCAAGAAGAAGATGTCCGTGACGACGACGCGCA
GCGGCCAGGGCAGCACCAGCCAGCTCTTCGACGACGAGGGCGAGGATGGC
ACCGAGGTCTAGAAGCTTTCTAGACCAT
BS17859.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:00:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek5-RD | 2796 | CG12199-PD | 1..2796 | 17..2812 | 13980 | 100 | Plus |
| kek5-RC | 2796 | CG12199-PC | 1..2796 | 17..2812 | 13980 | 100 | Plus |
| kek5-RA | 2796 | CG12199-PA | 1..2796 | 17..2812 | 13980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:00:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek5-RD | 6284 | CG12199-RD | 1125..3920 | 17..2812 | 13980 | 100 | Plus |
| kek5-RC | 4544 | CG12199-RC | 1258..4053 | 17..2812 | 13980 | 100 | Plus |
| kek5-RA | 4374 | CG12199-RA | 1088..3883 | 17..2812 | 13980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:00:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19464670..19466221 | 17..1568 | 7760 | 100 | Plus |
| X | 23542271 | X | 19468306..19469550 | 1568..2812 | 6225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:00:22 has no hits.
BS17859.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:44:18 Download gff for
BS17859.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1071..3866 | 17..2812 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:03:24 Download gff for
BS17859.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1088..3883 | 17..2812 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:55:06 Download gff for
BS17859.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1071..3866 | 17..2812 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:01:45 Download gff for
BS17859.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1088..3883 | 17..2812 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:01:45 Download gff for
BS17859.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19464670..19466221 | 17..1568 | 100 | -> | Plus |
| X | 19468307..19469550 | 1569..2812 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:03:24 Download gff for
BS17859.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19358703..19360254 | 17..1568 | 100 | -> | Plus |
| arm_X | 19362340..19363583 | 1569..2812 | 100 | | Plus |
BS17859.pep Sequence
Translation from 16 to 2811
> BS17859.pep
MMGNRTERSGRRLGMILLLLGVLVVLMALPPPTAGTTDWMQSCGTCHCQW
NSGKKSADCKNKALTKIPQDMSNEMQVLDFAHNQIPELRREEFLLAGLPN
VHKIFLRNCTIQEVHREAFKGLHILIELDLSGNRIRELHPGTFAGLEKLR
NVIINNNEIEVLPNHLFVNLSFLSRIEFRNNRLRQVQLHVFAGTMALSAI
SLEQNRLSHLHKETFKDLQKLMHLSLQGNAWNCSCELQDFRDFAISKRLY
TPPTDCQEPPQLRGKLWSEVPSENFACRPRILGSVRSFIEANHDNISLPC
RIVGSPRPNVTWVYNKRPLQQYDPRVRVLTSVEQMPEQPSQVLTSELRIV
GVRASDKGAYTCVADNRGGRAEAEFQLLVSGDYAGAVSASDGMGMGAIGA
PTIDPQTNMFLIICLIITTLLLLLLVAVLTLFWYCRRIKTYQKDTTMMSG
DGLISSKMDKTHNGSMLEGSVIMEMQKSLLNEVNPVEKPPRRTDIESVDG
GDDVLEIKKTLLDDTVYVANHSRDEEAVSVAMSDTTTTPRSRHTYVDDAY
ANSLPPDLLAFPARVPPTSPSMQSSQSNIPDQVIYGIRSPPSLTSPVYTH
MTPHGIYGTKTMTAPHNGFMTLQHPKSRNLALIATTNSSRQHQHHHQLQQ
QQQHHHHHQQQQQQQQQQQHPLATTSPFLPAPVVYSPATGVVMKQGYMTI
PRKPRAPSWAPSTSGAAGHGSIQLSEFQSPTSPNPSETGTATTAELQAEP
VYDNLGLRTTAGGNSTLNLTKIAGSQGGAGQQYSMRDRPLPATPSLTSVS
SATNASKIYEPIHELIQQQQQLQQQQQQQQQRLGSMDTEPLYGVRQQGIT
ILPGSSISGAGLGHAAYLSPGSGAAVSPSHASSSGDSPKAAKIPPRPPPK
PKKKMSVTTTRSGQGSTSQLFDDEGEDGTEV*
BS17859.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:16:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek5-PD | 931 | CG12199-PD | 1..931 | 1..931 | 4858 | 100 | Plus |
| kek5-PC | 931 | CG12199-PC | 1..931 | 1..931 | 4858 | 100 | Plus |
| kek5-PA | 931 | CG12199-PA | 1..931 | 1..931 | 4858 | 100 | Plus |
| kek5-PB | 931 | CG12199-PB | 1..931 | 1..931 | 4858 | 100 | Plus |
| kek4-PC | 649 | CG9431-PC | 33..532 | 34..529 | 770 | 34.9 | Plus |
