Clone Sequence Records
BS17931.complete Sequence
701 bp assembled on 2010-02-09
GenBank Submission: KX805851
> BS17931.complete
GAAGTTATCAGTCGACATGGTCAAGTTAACTCTATATGGTGTGAATCCCA
GTCCACCAGTTCGTGCCGTCAAACTCACTCTGGCTGCCCTCCAGCTGCCC
TATGAGTTTGTAAACGTTAATATTTCGGGTCAGGAGCAGCTTTCTGAGGA
ATATCTAAAAAAGAATCCAGAGCACACGGTGCCAACACTGGAGGATGATG
GTAACTACATTTGGGACTCGCATGCCATTATCGCGTATCTGGTGTCCAAA
TATGCAGATTCGGATGCCCTGTATCCCAGAGATCTGCTCCAGCGAGCTGT
GGTGGATCAACGACTGCACTTCGAGACAGGAGTGGTTTTCGCCAATGGCA
TTAAGGCCATTACCAAGCCGTTATTCTTTAATGGCCTGAACAGGATTCCC
AAGGAACGCTACGATGCCATTGTCGAGATCTATGACTTTGTGGAGACCTT
CCTCGCTGGACATGATTACATTGCTGGGGATCAGTTGACCATTGCCGATT
TTAGCCTGATCTCGTCGATTACCTCGCTGGTGGCGTTCGTGGAGATCGAT
AGGTTGAAATATCCCAGGATCATCGAATGGGTCAGGCGTTTGGAGAAGCT
GCCTTACTACGAGGAGGCCAATGCGAAGGGAGCCCGGGAGTTGGAGACCA
TTCTAAAGTCCACTAATTTCACCTTTGCAACCTAGAAGCTTTCTAGACCA
T
BS17931.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:04:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE5-RA | 669 | CG17527-PA | 1..669 | 17..685 | 3345 | 100 | Plus |
GstE6-RA | 669 | CG17530-PA | 1..656 | 17..672 | 790 | 74.7 | Plus |
GstE7-RA | 672 | CG17531-PA | 34..488 | 50..504 | 565 | 74.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE5-RA | 734 | CG17527-RA | 28..699 | 15..686 | 3360 | 100 | Plus |
GstE6-RA | 751 | CG17530-RA | 32..687 | 17..672 | 790 | 74.7 | Plus |
GstE7-RA | 765 | CG17531-RA | 65..519 | 50..504 | 565 | 74.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18404632..18405303 | 15..686 | 3360 | 100 | Plus |
2R | 25286936 | 2R | 18406042..18406697 | 17..672 | 790 | 74.7 | Plus |
2R | 25286936 | 2R | 18406988..18407442 | 50..504 | 565 | 74.9 | Plus |
2R | 25286936 | 2R | 18408004..18408394 | 161..551 | 545 | 76 | Plus |
2R | 25286936 | 2R | 18397155..18397321 | 327..161 | 280 | 77.8 | Minus |
2R | 25286936 | 2R | 18403419..18403502 | 161..244 | 210 | 83.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:04:04 has no hits.
BS17931.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:21:15 Download gff for
BS17931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE5-RA | 1..669 | 17..685 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:14:34 Download gff for
BS17931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE5-RA | 1..669 | 17..685 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:18 Download gff for
BS17931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE5-RA | 30..698 | 17..685 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:21:15 Download gff for
BS17931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE5-RA | 1..669 | 17..685 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:52 Download gff for
BS17931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE5-RA | 30..698 | 17..685 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:52 Download gff for
BS17931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18404634..18405302 | 17..685 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:18 Download gff for
BS17931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14292139..14292807 | 17..685 | 100 | | Plus |
BS17931.3prime Sequence
699 bp (699 high quality bases) assembled on 2007-05-30
> BS17931.3prime
ATGGTCTAGAAAGCTTCTAGGTTGCAAAGGTGAAATTAGTGGACTTTAGA
ATGGTCTCCAACTCCCGGGCTCCCTTCGCATTGGCCTCCTCGTAGTAAGG
CAGCTTCTCCAAACGCCTGACCCATTCGATGATCCTGGGATATTTCAACC
TATCGATCTCCACGAACGCCACCAGCGAGGTAATCGACGAGATCAGGCTA
AAATCGGCAATGGTCAACTGATCCCCAGCAATGTAATCATGTCCAGCGAG
GAAGGTCTCCACAAAGTCATAGATCTCGACAATGGCATCGTAGCGTTCCT
TGGGAATCCTGTTCAGGCCATTAAAGAATAACGGCTTGGTAATGGCCTTA
ATGCCATTGGCGAAAACCACTCCTGTCTCGAAGTGCAGTCGTTGATCCAC
CACAGCTCGCTGGAGCAGATCTCTGGGATACAGGGCATCCGAATCTGCAT
ATTTGGACACCAGATACGCGATAATGGCATGCGAGTCCCAAATGTAGTTA
CCATCATCCTCCAGTGTTGGCACCGTGTGCTCTGGATTCTTTTTTAGATA
TTCCTCAGAAAGCTGCTCCTGACCCGAAATATTAACGTTTACAAACTCAT
AGGGCAGCTGGAGGGCAGCCAGAGTGAGTTTGACGGCACGAACTGGTGGA
CTGGGATTCACACCATATAGAGTTAACTTGACCATGTCGACTGATAACT
BS17931.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:49:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17527-PA | 669 | GstE5-RA | 1..669 | 685..17 | 3345 | 100 | Minus |
CG17530-PA | 669 | GstE6-RA | 145..254 | 541..432 | 175 | 86.3 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:16:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE5-RA | 734 | CG17527-RA | 28..699 | 687..16 | 3360 | 100 | Minus |
GstE6-RA | 751 | CG17530-RA | 32..687 | 685..30 | 790 | 74.9 | Minus |
GstE7-RA | 765 | CG17531-RA | 65..519 | 652..198 | 595 | 76.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:16:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18404632..18405303 | 687..16 | 3360 | 100 | Minus |
2R | 25286936 | 2R | 18406042..18406697 | 685..30 | 790 | 74.7 | Minus |
2R | 25286936 | 2R | 18406988..18407442 | 652..198 | 565 | 74.9 | Minus |
2R | 25286936 | 2R | 18408004..18408394 | 541..151 | 545 | 76 | Minus |
2R | 25286936 | 2R | 18397155..18397321 | 375..541 | 280 | 77.8 | Plus |
2R | 25286936 | 2R | 18403419..18403502 | 541..458 | 210 | 83.3 | Minus |
Blast to na_te.dros performed on 2015-02-12 00:16:21 has no hits.
BS17931.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:49:43 Download gff for
BS17931.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17527-PA | 1..669 | 17..685 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 03:44:42 Download gff for
BS17931.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE5-RA | 21..706 | 5..692 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:04:07 Download gff for
BS17931.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE5-RA | 21..706 | 5..692 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:04:07 Download gff for
BS17931.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18404625..18405310 | 5..692 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 03:44:42 Download gff for
BS17931.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14292130..14292815 | 5..692 | 98 | | Minus |
BS17931.5prime Sequence
699 bp (699 high quality bases) assembled on 2007-05-30
> BS17931.5prime
GAAGTTATCACTCGACATGGTCAAGTTAACTCTATATGGTGTGAATCCCA
GTCCACCAGTTCGTGCCGTCAAACTCACTCTGGCTGCCCTCCAGCTGCCC
TATGAGTTTGTAAACGTTAATATTTCGGGTCAGGAGCAGCTTTCTGAGGA
ATATCTAAAAAAGAATCCAGAGCACACGGTGCCAACACTGGAGGATGATG
GTAACTACATTTGGGACTCGCATGCCATTATCGCGTATCTGGTGTCCAAA
TATGCAGATTCGGATGCCCTGTATCCCAGAGATCTGCTCCAGCGAGCTGT
GGTGGATCAACGACTGCACTTCGAGACAGGAGTGGTTTTCGCCAATGGCA
TTAAGGCCATTACCAAGCCGTTATTCTTTAATGGCCTGAACAGGATTCCC
AAGGAACGCTACGATGCCATTGTCGAGATCTATGACTTTGTGGAGACCTT
CCTCGCTGGACATGATTACATTGCTGGGGATCAGTTGACCATTGCCGATT
TTAGCCTGATCTCGTCGATTACCTCGCTGGTGGCGTTCGTGGAGATCGAT
AGGTTGAAATATCCCAGGATCATCGAATGGGTCAGGCGTTTGGAGAAGCT
GCCTTACTACGAGGAGGCCAATGCGAAGGGAGCCCGGGAGTTGGAGACCA
TTCTAAAGTCCACTAATTTCACCTTTGCAACCTAGAAGCTTTCTAGACC
BS17931.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:49:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17527-PA | 669 | GstE5-RA | 1..669 | 17..685 | 3345 | 100 | Plus |
CG17530-PA | 669 | GstE6-RA | 145..254 | 161..270 | 175 | 86.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:15:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE5-RA | 734 | CG17527-RA | 28..699 | 15..686 | 3360 | 100 | Plus |
GstE6-RA | 751 | CG17530-RA | 32..687 | 17..672 | 790 | 74.9 | Plus |
GstE7-RA | 765 | CG17531-RA | 65..519 | 50..504 | 595 | 76.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:15:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18404632..18405303 | 15..686 | 3360 | 100 | Plus |
2R | 25286936 | 2R | 18406042..18406697 | 17..672 | 790 | 74.7 | Plus |
2R | 25286936 | 2R | 18406988..18407442 | 50..504 | 565 | 74.9 | Plus |
2R | 25286936 | 2R | 18408004..18408394 | 161..551 | 545 | 76 | Plus |
2R | 25286936 | 2R | 18397155..18397321 | 327..161 | 280 | 77.8 | Minus |
2R | 25286936 | 2R | 18403419..18403502 | 161..244 | 210 | 83.3 | Plus |
Blast to na_te.dros performed on 2015-02-13 07:15:20 has no hits.
BS17931.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:49:47 Download gff for
BS17931.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17527-PA | 1..669 | 17..685 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 01:07:30 Download gff for
BS17931.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE5-RA | 28..706 | 15..697 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:23:50 Download gff for
BS17931.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE5-RA | 28..706 | 15..697 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:23:50 Download gff for
BS17931.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18404632..18405310 | 15..697 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 01:07:30 Download gff for
BS17931.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14292137..14292815 | 15..697 | 99 | | Plus |
BS17931.pep Sequence
Translation from 16 to 684
> BS17931.pep
MVKLTLYGVNPSPPVRAVKLTLAALQLPYEFVNVNISGQEQLSEEYLKKN
PEHTVPTLEDDGNYIWDSHAIIAYLVSKYADSDALYPRDLLQRAVVDQRL
HFETGVVFANGIKAITKPLFFNGLNRIPKERYDAIVEIYDFVETFLAGHD
YIAGDQLTIADFSLISSITSLVAFVEIDRLKYPRIIEWVRRLEKLPYYEE
ANAKGARELETILKSTNFTFAT*
BS17931.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:01:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE5-PA | 222 | CG17527-PA | 1..222 | 1..222 | 1136 | 100 | Plus |
GstE6-PA | 222 | CG17530-PA | 1..220 | 1..220 | 884 | 75.5 | Plus |
GstE8-PB | 222 | CG17533-PB | 1..222 | 1..222 | 846 | 71.2 | Plus |
GstE8-PA | 222 | CG17533-PA | 1..222 | 1..222 | 846 | 71.2 | Plus |
GstE7-PA | 223 | CG17531-PA | 1..222 | 1..222 | 846 | 69.8 | Plus |