Clone BS17931 Report

Search the DGRC for BS17931

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:179
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptGstE5-RA
Protein status:BS17931.pep: full length peptide match
Sequenced Size:701

Clone Sequence Records

BS17931.complete Sequence

701 bp assembled on 2010-02-09

GenBank Submission: KX805851

> BS17931.complete
GAAGTTATCAGTCGACATGGTCAAGTTAACTCTATATGGTGTGAATCCCA
GTCCACCAGTTCGTGCCGTCAAACTCACTCTGGCTGCCCTCCAGCTGCCC
TATGAGTTTGTAAACGTTAATATTTCGGGTCAGGAGCAGCTTTCTGAGGA
ATATCTAAAAAAGAATCCAGAGCACACGGTGCCAACACTGGAGGATGATG
GTAACTACATTTGGGACTCGCATGCCATTATCGCGTATCTGGTGTCCAAA
TATGCAGATTCGGATGCCCTGTATCCCAGAGATCTGCTCCAGCGAGCTGT
GGTGGATCAACGACTGCACTTCGAGACAGGAGTGGTTTTCGCCAATGGCA
TTAAGGCCATTACCAAGCCGTTATTCTTTAATGGCCTGAACAGGATTCCC
AAGGAACGCTACGATGCCATTGTCGAGATCTATGACTTTGTGGAGACCTT
CCTCGCTGGACATGATTACATTGCTGGGGATCAGTTGACCATTGCCGATT
TTAGCCTGATCTCGTCGATTACCTCGCTGGTGGCGTTCGTGGAGATCGAT
AGGTTGAAATATCCCAGGATCATCGAATGGGTCAGGCGTTTGGAGAAGCT
GCCTTACTACGAGGAGGCCAATGCGAAGGGAGCCCGGGAGTTGGAGACCA
TTCTAAAGTCCACTAATTTCACCTTTGCAACCTAGAAGCTTTCTAGACCA
T

BS17931.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:04:05
Subject Length Description Subject Range Query Range Score Percent Strand
GstE5-RA 669 CG17527-PA 1..669 17..685 3345 100 Plus
GstE6-RA 669 CG17530-PA 1..656 17..672 790 74.7 Plus
GstE7-RA 672 CG17531-PA 34..488 50..504 565 74.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:06
Subject Length Description Subject Range Query Range Score Percent Strand
GstE5-RA 734 CG17527-RA 28..699 15..686 3360 100 Plus
GstE6-RA 751 CG17530-RA 32..687 17..672 790 74.7 Plus
GstE7-RA 765 CG17531-RA 65..519 50..504 565 74.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18404632..18405303 15..686 3360 100 Plus
2R 25286936 2R 18406042..18406697 17..672 790 74.7 Plus
2R 25286936 2R 18406988..18407442 50..504 565 74.9 Plus
2R 25286936 2R 18408004..18408394 161..551 545 76 Plus
2R 25286936 2R 18397155..18397321 327..161 280 77.8 Minus
2R 25286936 2R 18403419..18403502 161..244 210 83.3 Plus
Blast to na_te.dros performed on 2014-11-28 03:04:04 has no hits.

BS17931.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:21:15 Download gff for BS17931.complete
Subject Subject Range Query Range Percent Splice Strand
GstE5-RA 1..669 17..685 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:14:34 Download gff for BS17931.complete
Subject Subject Range Query Range Percent Splice Strand
GstE5-RA 1..669 17..685 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:18 Download gff for BS17931.complete
Subject Subject Range Query Range Percent Splice Strand
GstE5-RA 30..698 17..685 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:21:15 Download gff for BS17931.complete
Subject Subject Range Query Range Percent Splice Strand
GstE5-RA 1..669 17..685 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:52 Download gff for BS17931.complete
Subject Subject Range Query Range Percent Splice Strand
GstE5-RA 30..698 17..685 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:52 Download gff for BS17931.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18404634..18405302 17..685 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:18 Download gff for BS17931.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14292139..14292807 17..685 100   Plus

BS17931.3prime Sequence

699 bp (699 high quality bases) assembled on 2007-05-30

> BS17931.3prime
ATGGTCTAGAAAGCTTCTAGGTTGCAAAGGTGAAATTAGTGGACTTTAGA
ATGGTCTCCAACTCCCGGGCTCCCTTCGCATTGGCCTCCTCGTAGTAAGG
CAGCTTCTCCAAACGCCTGACCCATTCGATGATCCTGGGATATTTCAACC
TATCGATCTCCACGAACGCCACCAGCGAGGTAATCGACGAGATCAGGCTA
AAATCGGCAATGGTCAACTGATCCCCAGCAATGTAATCATGTCCAGCGAG
GAAGGTCTCCACAAAGTCATAGATCTCGACAATGGCATCGTAGCGTTCCT
TGGGAATCCTGTTCAGGCCATTAAAGAATAACGGCTTGGTAATGGCCTTA
ATGCCATTGGCGAAAACCACTCCTGTCTCGAAGTGCAGTCGTTGATCCAC
CACAGCTCGCTGGAGCAGATCTCTGGGATACAGGGCATCCGAATCTGCAT
ATTTGGACACCAGATACGCGATAATGGCATGCGAGTCCCAAATGTAGTTA
CCATCATCCTCCAGTGTTGGCACCGTGTGCTCTGGATTCTTTTTTAGATA
TTCCTCAGAAAGCTGCTCCTGACCCGAAATATTAACGTTTACAAACTCAT
AGGGCAGCTGGAGGGCAGCCAGAGTGAGTTTGACGGCACGAACTGGTGGA
CTGGGATTCACACCATATAGAGTTAACTTGACCATGTCGACTGATAACT

BS17931.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:49:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG17527-PA 669 GstE5-RA 1..669 685..17 3345 100 Minus
CG17530-PA 669 GstE6-RA 145..254 541..432 175 86.3 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:16:25
Subject Length Description Subject Range Query Range Score Percent Strand
GstE5-RA 734 CG17527-RA 28..699 687..16 3360 100 Minus
GstE6-RA 751 CG17530-RA 32..687 685..30 790 74.9 Minus
GstE7-RA 765 CG17531-RA 65..519 652..198 595 76.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:16:17
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18404632..18405303 687..16 3360 100 Minus
2R 25286936 2R 18406042..18406697 685..30 790 74.7 Minus
2R 25286936 2R 18406988..18407442 652..198 565 74.9 Minus
2R 25286936 2R 18408004..18408394 541..151 545 76 Minus
2R 25286936 2R 18397155..18397321 375..541 280 77.8 Plus
2R 25286936 2R 18403419..18403502 541..458 210 83.3 Minus
Blast to na_te.dros performed on 2015-02-12 00:16:21 has no hits.

BS17931.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:49:43 Download gff for BS17931.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17527-PA 1..669 17..685 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 03:44:42 Download gff for BS17931.3prime
Subject Subject Range Query Range Percent Splice Strand
GstE5-RA 21..706 5..692 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:04:07 Download gff for BS17931.3prime
Subject Subject Range Query Range Percent Splice Strand
GstE5-RA 21..706 5..692 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:04:07 Download gff for BS17931.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 18404625..18405310 5..692 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 03:44:42 Download gff for BS17931.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14292130..14292815 5..692 98   Minus

BS17931.5prime Sequence

699 bp (699 high quality bases) assembled on 2007-05-30

> BS17931.5prime
GAAGTTATCACTCGACATGGTCAAGTTAACTCTATATGGTGTGAATCCCA
GTCCACCAGTTCGTGCCGTCAAACTCACTCTGGCTGCCCTCCAGCTGCCC
TATGAGTTTGTAAACGTTAATATTTCGGGTCAGGAGCAGCTTTCTGAGGA
ATATCTAAAAAAGAATCCAGAGCACACGGTGCCAACACTGGAGGATGATG
GTAACTACATTTGGGACTCGCATGCCATTATCGCGTATCTGGTGTCCAAA
TATGCAGATTCGGATGCCCTGTATCCCAGAGATCTGCTCCAGCGAGCTGT
GGTGGATCAACGACTGCACTTCGAGACAGGAGTGGTTTTCGCCAATGGCA
TTAAGGCCATTACCAAGCCGTTATTCTTTAATGGCCTGAACAGGATTCCC
AAGGAACGCTACGATGCCATTGTCGAGATCTATGACTTTGTGGAGACCTT
CCTCGCTGGACATGATTACATTGCTGGGGATCAGTTGACCATTGCCGATT
TTAGCCTGATCTCGTCGATTACCTCGCTGGTGGCGTTCGTGGAGATCGAT
AGGTTGAAATATCCCAGGATCATCGAATGGGTCAGGCGTTTGGAGAAGCT
GCCTTACTACGAGGAGGCCAATGCGAAGGGAGCCCGGGAGTTGGAGACCA
TTCTAAAGTCCACTAATTTCACCTTTGCAACCTAGAAGCTTTCTAGACC

BS17931.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:49:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG17527-PA 669 GstE5-RA 1..669 17..685 3345 100 Plus
CG17530-PA 669 GstE6-RA 145..254 161..270 175 86.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:15:21
Subject Length Description Subject Range Query Range Score Percent Strand
GstE5-RA 734 CG17527-RA 28..699 15..686 3360 100 Plus
GstE6-RA 751 CG17530-RA 32..687 17..672 790 74.9 Plus
GstE7-RA 765 CG17531-RA 65..519 50..504 595 76.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:15:18
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18404632..18405303 15..686 3360 100 Plus
2R 25286936 2R 18406042..18406697 17..672 790 74.7 Plus
2R 25286936 2R 18406988..18407442 50..504 565 74.9 Plus
2R 25286936 2R 18408004..18408394 161..551 545 76 Plus
2R 25286936 2R 18397155..18397321 327..161 280 77.8 Minus
2R 25286936 2R 18403419..18403502 161..244 210 83.3 Plus
Blast to na_te.dros performed on 2015-02-13 07:15:20 has no hits.

BS17931.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:49:47 Download gff for BS17931.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17527-PA 1..669 17..685 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 01:07:30 Download gff for BS17931.5prime
Subject Subject Range Query Range Percent Splice Strand
GstE5-RA 28..706 15..697 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:23:50 Download gff for BS17931.5prime
Subject Subject Range Query Range Percent Splice Strand
GstE5-RA 28..706 15..697 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:23:50 Download gff for BS17931.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 18404632..18405310 15..697 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 01:07:30 Download gff for BS17931.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14292137..14292815 15..697 99   Plus

BS17931.pep Sequence

Translation from 16 to 684

> BS17931.pep
MVKLTLYGVNPSPPVRAVKLTLAALQLPYEFVNVNISGQEQLSEEYLKKN
PEHTVPTLEDDGNYIWDSHAIIAYLVSKYADSDALYPRDLLQRAVVDQRL
HFETGVVFANGIKAITKPLFFNGLNRIPKERYDAIVEIYDFVETFLAGHD
YIAGDQLTIADFSLISSITSLVAFVEIDRLKYPRIIEWVRRLEKLPYYEE
ANAKGARELETILKSTNFTFAT*

BS17931.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:01:49
Subject Length Description Subject Range Query Range Score Percent Strand
GstE5-PA 222 CG17527-PA 1..222 1..222 1136 100 Plus
GstE6-PA 222 CG17530-PA 1..220 1..220 884 75.5 Plus
GstE8-PB 222 CG17533-PB 1..222 1..222 846 71.2 Plus
GstE8-PA 222 CG17533-PA 1..222 1..222 846 71.2 Plus
GstE7-PA 223 CG17531-PA 1..222 1..222 846 69.8 Plus