Clone Sequence Records
BS17974.3prime Sequence
711 bp (654 high quality bases) assembled on 2007-05-30
> BS17974.3prime
ATGGTCTAGAAAGCTTTTAGTTCGAGCAGAGCTGGCGGTACCAGCTTTTG
CTCTCCCTGCACTTTGGATTGGAGCACATGGGACAACGCATGAGGAACTT
GGGGTTGACTGCCTGCTGGGACTTCAGGTGGTCTGCCACAACGTTTGTCA
GGGCGTCGATGAACAGCGGGTGGTCGTTGGGGGTTGCAGCTCGACGGATT
TCCTCTACGCCTACCTCCTTGGCCAGTTCGTCGCAGTACTCGATGTCGAG
CTCATGCAGCGTCTCGATGTGCTCGTTCACGAAGGCAATGGGCACAAGGA
TGAAGTTCTTCAGGCCTTGCTTAACATAGCCCTTAATGGCATCATCAGTT
GCGGGCGCCAGCCAGGGTAGCGGGCCCACCTTGGATTGCCATGCCAGGCT
GTAGGGATTCGTCTGACCAAGTTCCTGCATCACCATGTGTACGCTAGCAC
CAATCTCCGAGGGATACGCGTCACCCCGGTTCACAGCCTTAAGGGGAAGG
GAGTGGGCAGTGAAGAGGATGACCACATCATTTCGTTTCGTTTCCACAAA
TTTGGCCAGCTCGTCGCGAATTCGCTGGGCAAACGTTTTGATTAGAAGTG
GATGAGTGCCCCACCTGTCGATAATGCTCCATTTGATATCCGAGGGCAGA
TTACTAGAGAAGTAGAGGGGATCAAATAAATAGCTGCAATTGTGCATGTC
GACTGATAACT
BS17974.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:55:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2098-PB | 681 | ferrochelatase-RB | 1..681 | 697..17 | 3355 | 99.7 | Minus |
CG2098-PA | 1155 | ferrochelatase-RA | 519..1155 | 653..17 | 3185 | 100 | Minus |
CG2098-PC | 846 | ferrochelatase-RC | 519..841 | 653..331 | 1615 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:38:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FeCH-RB | 1338 | CG2098-RB | 492..1172 | 697..17 | 3375 | 99.7 | Minus |
FeCH-RA | 1407 | CG2098-RA | 605..1241 | 653..17 | 3185 | 100 | Minus |
FeCH-RC | 1466 | CG2098-RC | 605..927 | 653..331 | 1615 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:38:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31810999..31811365 | 331..697 | 1805 | 99.5 | Plus |
3R | 32079331 | 3R | 31810626..31810942 | 17..333 | 1585 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 10:38:07 has no hits.
BS17974.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:55:13 Download gff for
BS17974.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2098-PB | 1..681 | 17..697 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 21:53:27 Download gff for
BS17974.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FeCH-RB | 489..1174 | 13..700 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:15:23 Download gff for
BS17974.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FeCH-RB | 489..1174 | 13..700 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:15:23 Download gff for
BS17974.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31810624..31810940 | 13..331 | 99 | <- | Plus |
3R | 31811000..31811368 | 332..700 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 21:53:27 Download gff for
BS17974.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27636346..27636662 | 13..331 | 99 | <- | Plus |
arm_3R | 27636722..27637090 | 332..700 | 99 | | Plus |
BS17974.5prime Sequence
711 bp (711 high quality bases) assembled on 2007-05-30
> BS17974.5prime
GAAGTTATCAGTCGACATGCACAATTGCAGCTATTTATTTGATCCCCTCT
ACCTCTTTAGTAATCTGCCCTCGGATATCAAATGGAGCATTATCGACAGG
TGGGGCACTCATCCACTTCTAATCAAAACGTTTGCCCAGCGAATTCGCGA
CGAGCTGGCCAAATTTGTGGAAACGAAACGAAATGATGTGGTCATCCTCT
TCACTGCCCACTCCCTTCCCCTTAAGGCTGTGAACCGGGGTGACGCGTAT
CCCTCGGAGATTGGTGCTAGCGTACACATGGTGATGCAGGAACTTGGTCA
GACGAATCCCTACAGCCTGGCATGGCAATCCAAGGTGGGCCCGCTACCCT
GGCTGGCGCCCGCAACTGATGATGCCATTAAGGGCTATGTTAAGCAAGGC
CTGAAGAACTTCATCCTTGTGCCCATTGCCTTCGTGAACGAGCACATCGA
GACGCTGCATGAGCTCGACATCGAGTACTGCGACGAACTGGCCAAGGAGG
TAGGCGTAGAGGAAATCCGTCGAGCTGCAACCCCCAACGACCACCCGCTG
TTCATCGACGCCCTGACAAACGTTGTGGCAGACCACCTGAAGTCCCAGCA
GGCAGTCAACCCCAAGTTCCTCATGCGTTGTCCCATGTGCTCCAATCCAA
AGTGCAGGGAGAGCAAAAGCTGGTACCGCCAGCTCTGCTCGAACTAAAAG
CTTTCTAGACC
BS17974.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:55:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2098-PB | 681 | ferrochelatase-RB | 1..681 | 17..697 | 3405 | 100 | Plus |
CG2098-PA | 1155 | ferrochelatase-RA | 519..1155 | 61..697 | 3185 | 100 | Plus |
CG2098-PC | 846 | ferrochelatase-RC | 519..841 | 61..383 | 1615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:56:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FeCH-RB | 1338 | CG2098-RB | 492..1172 | 17..697 | 3405 | 100 | Plus |
FeCH-RA | 1407 | CG2098-RA | 605..1241 | 61..697 | 3185 | 100 | Plus |
FeCH-RC | 1466 | CG2098-RC | 605..927 | 61..383 | 1615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:56:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31810999..31811365 | 383..17 | 1835 | 100 | Minus |
3R | 32079331 | 3R | 31810626..31810942 | 697..381 | 1585 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:56:29 has no hits.
BS17974.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 11:55:18 Download gff for
BS17974.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2098-PB | 1..681 | 17..697 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:16:07 Download gff for
BS17974.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FeCH-RB | 489..1174 | 14..701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:08:49 Download gff for
BS17974.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FeCH-RB | 489..1174 | 14..701 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:08:49 Download gff for
BS17974.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31810624..31810940 | 383..701 | 99 | <- | Minus |
3R | 31811000..31811368 | 14..382 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:16:07 Download gff for
BS17974.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27636346..27636662 | 383..701 | 99 | <- | Minus |
arm_3R | 27636722..27637090 | 14..382 | 99 | | Minus |
BS17974.complete Sequence
713 bp assembled on 2010-02-09
GenBank Submission: KX803751
> BS17974.complete
GAAGTTATCAGTCGACATGCACAATTGCAGCTATTTATTTGATCCCCTCT
ACCTCTTTAGTAATCTGCCCTCGGATATCAAATGGAGCATTATCGACAGG
TGGGGCACTCATCCACTTCTAATCAAAACGTTTGCCCAGCGAATTCGCGA
CGAGCTGGCCAAATTTGTGGAAACGAAACGAAATGATGTGGTCATCCTCT
TCACTGCCCACTCCCTTCCCCTTAAGGCTGTGAACCGGGGTGACGCGTAT
CCCTCGGAGATTGGTGCTAGCGTACACATGGTGATGCAGGAACTTGGTCA
GACGAATCCCTACAGCCTGGCATGGCAATCCAAGGTGGGCCCGCTACCCT
GGCTGGCGCCCGCAACTGATGATGCCATTAAGGGCTATGTTAAGCAAGGC
CTGAAGAACTTCATCCTTGTGCCCATTGCCTTCGTGAACGAGCACATCGA
GACGCTGCATGAGCTCGACATCGAGTACTGCGACGAACTGGCCAAGGAGG
TAGGCGTAGAGGAAATCCGTCGAGCTGCAACCCCCAACGACCACCCGCTG
TTCATCGACGCCCTGACAAACGTTGTGGCAGACCACCTGAAGTCCCAGCA
GGCAGTCAACCCCAAGTTCCTCATGCGTTGTCCCATGTGCTCCAATCCAA
AGTGCAGGGAGAGCAAAAGCTGGTACCGCCAGCTCTGCTCGAACTAAAAG
CTTTCTAGACCAT
BS17974.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:36:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FeCH-RB | 681 | CG2098-PB | 1..681 | 17..697 | 3405 | 100 | Plus |
FeCH-RA | 1155 | CG2098-PA | 519..1155 | 61..697 | 3185 | 100 | Plus |
FeCH-RC | 846 | CG2098-PC | 519..841 | 61..383 | 1615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:36:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FeCH-RB | 1338 | CG2098-RB | 492..1172 | 17..697 | 3405 | 100 | Plus |
FeCH-RA | 1407 | CG2098-RA | 605..1241 | 61..697 | 3185 | 100 | Plus |
FeCH-RC | 1466 | CG2098-RC | 605..927 | 61..383 | 1615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:36:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31810999..31811365 | 383..17 | 1835 | 100 | Minus |
3R | 32079331 | 3R | 31810626..31810942 | 697..381 | 1585 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:36:34 has no hits.
BS17974.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:26:35 Download gff for
BS17974.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ferrochelatase-RB | 1..681 | 17..697 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:12:28 Download gff for
BS17974.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ferrochelatase-RB | 492..1170 | 17..695 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:23 Download gff for
BS17974.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FeCH-RB | 492..1170 | 17..695 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:26:35 Download gff for
BS17974.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ferrochelatase-RB | 489..1174 | 14..701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:32:48 Download gff for
BS17974.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FeCH-RB | 492..1170 | 17..695 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:32:48 Download gff for
BS17974.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31810628..31810940 | 383..695 | 100 | <- | Minus |
3R | 31811000..31811365 | 17..382 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:23 Download gff for
BS17974.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27636350..27636662 | 383..695 | 100 | <- | Minus |
arm_3R | 27636722..27637087 | 17..382 | 100 | | Minus |
BS17974.pep Sequence
Translation from 16 to 696
> BS17974.pep
MHNCSYLFDPLYLFSNLPSDIKWSIIDRWGTHPLLIKTFAQRIRDELAKF
VETKRNDVVILFTAHSLPLKAVNRGDAYPSEIGASVHMVMQELGQTNPYS
LAWQSKVGPLPWLAPATDDAIKGYVKQGLKNFILVPIAFVNEHIETLHEL
DIEYCDELAKEVGVEEIRRAATPNDHPLFIDALTNVVADHLKSQQAVNPK
FLMRCPMCSNPKCRESKSWYRQLCSN*
BS17974.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:03:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FeCH-PB | 226 | CG2098-PB | 1..226 | 1..226 | 1210 | 100 | Plus |
FeCH-PA | 384 | CG2098-PA | 170..384 | 12..226 | 1127 | 98.6 | Plus |
FeCH-PC | 281 | CG2098-PC | 170..280 | 12..122 | 568 | 97.3 | Plus |