Clone BS18058 Report

Search the DGRC for BS18058

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:180
Well:58
Vector:pDNR-Dual
Associated Gene/TranscriptCG31038-RC
Protein status:BS18058.pep: full length peptide match
Sequenced Size:1358

Clone Sequence Records

BS18058.complete Sequence

1358 bp assembled on 2009-12-07

GenBank Submission: KX802919

> BS18058.complete
GAAGTTATCAGTCGACATGTTCATTTTTCCCATACTGTTTGTTCAAATCG
TGATTTCTAATGTCATAAGGAGTCTCAAGCGCCGTCTCGCAAAGCCGCTG
AAAATGTCCGAGGACCTGGACGAGCTCTTCCTGACGCCCATTCCGGCGCC
CTCGGCCGTGGAGCTGCAGCAGTGCATACTGTTCGGCTTCCGGCGCCGCC
TTCATCCCGCCCAGATATTCGAGGAGTGCCGCAACGCCTTTGGGCCCTTC
TGCCCCAGTGCGCAGTACGTGGCGAAGTGGTACCAGCGGTTCCAGGACGG
CTTCTTCAATCTGGACGAGAAGGACGACGAGGAGCTGAGGATCGGGCATG
GCGGCACGCCCACCACCTGCAGTGATTACGATGATGACAGTGATTGCGGG
GAGGCGACCGTTCTGCCCCTGATCCTAAGTGAAATGATCCAACGCAGTGA
GGAGGATGACGATGATGATGGTACTGATGGTTTTGAGAAGGAGAGTGATG
ATGGTCTAGATGGTCATGTGATTGGTTATTGGCAGGGTTATGGCTATTTG
GGTGGCAAGCAAAGGTATAGTTGGGCTGGAACTAAACTTGGAAACTCGGC
TTGCGAGCTGCCCCCGCTGCCGAAATCTCTCATCGGCTTCAACAAGTTAC
TGTGCTCCGATTCGGGACTCCTGAGTGATGTGGAAGGAAACAATAACAGC
AGCGATGGCAGCCGAAAACCAAACGACAATCTTGCTGTGGAGACACAGGA
TACCAAGGAGCATGCCACCGATAAGTCACTGCCCTCCTCGCCGAACGGAA
ACACATCCATACCACCAATGCTGGTGGCCAAATCCGAGGCCAAGTCCCCC
AGCTTATCCGCCAAAGGAAACCCCCAGGCGGTCGAGGCGGGCAGCACTCT
GGATGCCCAGATTGCGACGCTGCGGAAGGAAATGAACGGACTGCGTCAAC
TAGATCTCTCGTTGCTGTCACAACTGTGGGTGCTTAACGAATCGATCCAA
GAGTTCCGCGCCCTGATCGAAGATCAGGAGAACGAGGATGAGGACGACGA
GGTGGAGGTGGAGGTGGGAAACGAGCTGGACGAGGAGGGCAACAGCCGGG
TGTCCTCGTCCATCGAGTCGGTGCGATTGGAGGGCGGTGCTGATGGCACG
TCGAAGCATCTGGGAACCATACCAAAGGTCATAACGACGCAGCCAAAGGT
GCTGAGGGACTCACTGGCCACGGCCAGCAAGGACCAGAAGCCGGTGCCCA
GGATGCGGAGTGCCCCGCCACCGCCACCTCCCGCCGTGCTGCAATCCTTG
TCCCTGGAGCGAAAACCGCCGGCTCCGTCACGACCCACATGAAAGCTTTC
TAGACCAT

BS18058.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:49:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG31038-RC 1326 CG31038-PC 1..1326 17..1342 6630 100 Plus
CG31038-RG 1239 CG31038-PG 1..1239 104..1342 6195 100 Plus
CG31038-RH 1302 CG31038-PH 549..1302 589..1342 3770 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:49:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG31038-RC 2039 CG31038-RC 74..1399 17..1342 6630 100 Plus
CG31038-RG 2369 CG31038-RG 443..1729 56..1342 6435 100 Plus
CG31038-RH 2015 CG31038-RH 622..1375 589..1342 3770 100 Plus
CG31038-RG 2369 CG31038-RG 74..113 17..56 200 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:48:58
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29896698..29897229 57..588 2660 100 Plus
3R 32079331 3R 29902183..29902591 934..1342 2045 100 Plus
3R 32079331 3R 29897300..29897645 589..934 1730 100 Plus
3R 32079331 3R 29895054..29895093 17..56 200 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:48:59 has no hits.

BS18058.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:41:42 Download gff for BS18058.complete
Subject Subject Range Query Range Percent Splice Strand
CG31038-RC 77..1396 22..1341 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:58:38 Download gff for BS18058.complete
Subject Subject Range Query Range Percent Splice Strand
CG31038-RC 79..1398 22..1341 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:00:16 Download gff for BS18058.complete
Subject Subject Range Query Range Percent Splice Strand
CG31038-RC 77..1396 22..1341 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:31 Download gff for BS18058.complete
Subject Subject Range Query Range Percent Splice Strand
CG31038-RC 79..1398 22..1341 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:31 Download gff for BS18058.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29897300..29897645 589..934 100 -> Plus
3R 29895059..29895093 22..56 100 -> Plus
3R 29896698..29897229 57..588 100 -> Plus
3R 29902184..29902590 935..1341 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:58:38 Download gff for BS18058.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25720781..25720815 22..56 100 -> Plus
arm_3R 25722420..25722951 57..588 100 -> Plus
arm_3R 25723022..25723367 589..934 100 -> Plus
arm_3R 25727906..25728312 935..1341 100   Plus

BS18058.3prime Sequence

896 bp (815 high quality bases) assembled on 2007-06-06

> BS18058.3prime
ATGGTCTAGAAAGCTTTCATGCGGGTCGTGACGGAGCCGGCGGTTTTCGC
TCCAGGGACAAGGATTGCAGCACGGCGGGAGGTGGCGGTGGCGGGGCACT
CCGCATCCTGGGCACCGGCTTCTGGTCCTTGCTGGCCGTGGCCAGTGAGT
CCCTCAGCACCTTTGGCTGCGTCGTTATGACCTTTGGTATGGTTCCCAGA
TGCTTCGACGTGCCATCAGCACCGCCCTCCAATCGCACCGACTCGATGGA
CGAGGACACCCGGCTGTTGCCCTCCTCGTCCAGCTCGTTTCCCACCTCCA
CCTCCACCTCGTCGTCCTCATCCTCGTTCTCCTGATCTTCGATCAGGGCG
CGGAACTCTTGGATCGATTCGTTAAGCACCCACAGTTGTGACAGCAACGA
GAGATCTAGTTGACGCAGTCCGTTCATTTCCTTCCGCAGCGTCGCAATCT
GGGCATCCAGAGTGCTGCCCGCCTCGACCGCCTGGGGGTTTCCTTTGGCG
GATAAGCTGGGGGACTTGGCCTCGGATTTGGCCACCAGCATTGGTGGTAT
GGATGTGTTTCCGTTCGGCGAGGAGGGCAGTGACTTATCGGTGGCATGCT
CCTTGGTATCCTGTGTCTCCACAGCAAGATTGTCGTTTGGTTTTCGGCTG
CCATCGCTGCTGTTATTGTTTCCTTCCACATCACTCAGGAGTCCCGAATC
GGAGCACAGTAACTTGTTGAAGCCGATGAGAGATTTCGGCAGCGGGGGCA
GCTCGCAAGCCGAGTTTCCAAGTTTAGTTCCAGCCCAACTATACCTTTGC
TTGCCACCCAAATAGCCATAACCCTGCCAATAACCAATCACATGACCATC
TAGACCATCATCACTCTCCTTCTCAAAACCATCAGTACCATCATCA

BS18058.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:04:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG31038-PC 1326 CG31038-RC 447..1326 896..17 4375 99.8 Minus
CG31038-PF 2193 CG31038-RF 1440..2193 770..17 3745 99.8 Minus
CG31038-PA 2193 CG31038-RA 1440..2193 770..17 3745 99.8 Minus
CG31038-PE 2193 CG31038-RE 1440..2193 770..17 3745 99.8 Minus
CG31038-PB 1818 CG31038-RB 1440..1785 770..425 1730 100 Minus
CG31038-PD 1818 CG31038-RD 1440..1785 770..425 1730 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:51:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG31038-RG 2369 CG31038-RG 850..1729 896..17 4385 99.9 Minus
CG31038-RC 2039 CG31038-RC 520..1399 896..17 4385 99.9 Minus
CG31038-RH 2015 CG31038-RH 520..1375 896..17 4015 97.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:50:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29902183..29902591 425..17 2030 99.8 Minus
3R 32079331 3R 29897300..29897645 770..425 1730 100 Minus
3R 32079331 3R 29897104..29897229 896..771 630 100 Minus
Blast to na_te.dros performed on 2015-02-12 23:50:59 has no hits.

BS18058.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:04:34 Download gff for BS18058.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31038-PC 448..1326 17..895 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 00:22:18 Download gff for BS18058.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31038-RC 521..1403 11..895 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:24:35 Download gff for BS18058.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31038-RC 521..1403 11..895 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:24:35 Download gff for BS18058.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 29897105..29897229 771..895 100 -> Minus
3R 29897300..29897645 425..770 100 -> Minus
3R 29902184..29902595 11..424 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 00:22:18 Download gff for BS18058.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25722827..25722951 771..895 100 -> Minus
arm_3R 25723022..25723367 425..770 100 -> Minus
arm_3R 25727906..25728317 11..424 99   Minus

BS18058.5prime Sequence

834 bp (711 high quality bases) assembled on 2007-06-06

> BS18058.5prime
GAAGTTATCAGTCGACATGTTCATTTTTCCCATACTGTTTGTTCAAATCG
TGATTTCTAATGTCATAAGGAGTCTCAAGCGCCGTCTCGCAAAGCCGCTG
AAAATGTCCGAGGACCTGGACGAGCTCTTCCTGACGCCCATTCCGGCGCC
CTCGGCCGTGGAGCTGCAGCAGTGCATACTGTTCGGCTTCCGGCGCCGCC
TTCATCCCGCCCAGATATTCGAGGAGTGCCGCAACGCCTTTGGGCCCTTC
TGCCCCAGTGCGCAGTACGTGGCGAAGTGGTACCAGCGGTTCCAGGACGG
CTTCTTCAATCTGGACGAGAAGGACGACGAGGAGCTGAGGATCGGGCATG
GCGGCACGCCCACCACCTGCAGTGATTACGATGATGACAGTGATTGCGGG
GAGGCGACCGTTCTGCCCCTGATCCTAAGTGAAATGATCCAACGCAGTGA
GGAGGATGACGATGATGATGGTACTGATGGTTTTGAGAAGGAGAGTGATG
ATGGTCTAGATGGTCATGTGATTGGTTATTGGCAGGGTTATGGCTATTTG
GGTGGCAAGCAAAGGTATAGTTGGGCTGGAACTAAACTTGGAAACTCGGC
TTGCGAGCTGCCCCCGCTGCCGAAATCTCTCATCGGCTTCAACAAGTTAC
TGTGCTCCGATTCGGGACTCCTGAGTGATGTGGAAGGAAACAATAACAGC
AGCGATGGCAGCCGAAAACCAAACGACAATCTTGCTGTGGAGACACANGA
TACCAAGGAGCATGCCACCGATAAGTCACTGCCCTCCTCGCCGAAACGAA
ACACATCCATACCACCAATGCTGGGTGCCAAATC

BS18058.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:04:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG31038-PC 1326 CG31038-RC 1..808 17..824 3971 99.6 Plus
CG31038-PF 2193 CG31038-RF 1440..1675 589..824 1111 98.7 Plus
CG31038-PA 2193 CG31038-RA 1440..1675 589..824 1111 98.7 Plus
CG31038-PB 1818 CG31038-RB 1440..1675 589..824 1111 98.7 Plus
CG31038-PD 1818 CG31038-RD 1440..1675 589..824 1111 98.7 Plus
CG31038-PE 2193 CG31038-RE 1440..1675 589..824 1111 98.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:47:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG31038-RC 2039 CG31038-RC 74..891 17..834 4019 99.4 Plus
CG31038-RG 2369 CG31038-RG 443..1221 56..834 3824 99.4 Plus
CG31038-RH 2015 CG31038-RH 74..867 17..834 3649 96.5 Plus
CG31038-RG 2369 CG31038-RG 74..113 17..56 200 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:46:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29896698..29897229 57..588 2660 100 Plus
3R 32079331 3R 29897300..29897545 589..834 1159 98 Plus
3R 32079331 3R 29895054..29895093 17..56 200 100 Plus
Blast to na_te.dros performed on 2015-02-13 15:46:59 has no hits.

BS18058.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:04:39 Download gff for BS18058.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31038-PC 1..818 17..834 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 13:57:46 Download gff for BS18058.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31038-RC 66..891 9..834 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:33:04 Download gff for BS18058.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31038-RC 66..891 9..834 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:33:04 Download gff for BS18058.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 29895046..29895093 9..56 91 -> Plus
3R 29896698..29897229 57..588 100 -> Plus
3R 29897300..29897545 589..834 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 13:57:46 Download gff for BS18058.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25720768..25720815 9..56 91 -> Plus
arm_3R 25722420..25722951 57..588 100 -> Plus
arm_3R 25723022..25723267 589..834 97   Plus

BS18058.pep Sequence

Translation from 16 to 1341

> BS18058.pep
MFIFPILFVQIVISNVIRSLKRRLAKPLKMSEDLDELFLTPIPAPSAVEL
QQCILFGFRRRLHPAQIFEECRNAFGPFCPSAQYVAKWYQRFQDGFFNLD
EKDDEELRIGHGGTPTTCSDYDDDSDCGEATVLPLILSEMIQRSEEDDDD
DGTDGFEKESDDGLDGHVIGYWQGYGYLGGKQRYSWAGTKLGNSACELPP
LPKSLIGFNKLLCSDSGLLSDVEGNNNSSDGSRKPNDNLAVETQDTKEHA
TDKSLPSSPNGNTSIPPMLVAKSEAKSPSLSAKGNPQAVEAGSTLDAQIA
TLRKEMNGLRQLDLSLLSQLWVLNESIQEFRALIEDQENEDEDDEVEVEV
GNELDEEGNSRVSSSIESVRLEGGADGTSKHLGTIPKVITTQPKVLRDSL
ATASKDQKPVPRMRSAPPPPPPAVLQSLSLERKPPAPSRPT*

BS18058.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:01:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG31038-PC 441 CG31038-PC 1..441 1..441 2298 100 Plus
CG31038-PH 433 CG31038-PH 1..433 1..441 2227 98 Plus
CG31038-PG 412 CG31038-PG 1..412 30..441 2160 100 Plus
CG31038-PE 730 CG31038-PE 479..730 190..441 1269 99.6 Plus
CG31038-PA 730 CG31038-PA 479..730 190..441 1269 99.6 Plus