Clone Sequence Records
BS18091.complete Sequence
635 bp assembled on 2010-02-09
GenBank Submission: KX805247
> BS18091.complete
GAAGTTATCAGTCGACATGCCGACTACACCACAGGATCTTGCCCTTGCCC
ACTCTCTTGCTCAAAGACCTCCGACCGATAGCAGTGAGGCCAAGGAGCAG
GAGGCCGGCGAATCGGACAACCTGCCCAACCTGTGCACTTTGTCGCTGGA
CGAACTGAAACAGCTGGACAGGGATCCCGAGTTCTTCGAGGACTTCATCG
AGGAGATGTCCGTGGTGCAGTACCTGAACGAGGAGCTCGATTCAATGATG
GACCAGGTGGAGATTATATCAAGAGAGAACGAGTGCAAGGGCATTCATCT
GGTAGAGCTGAAGCGCCGACTCAGCGACGATTTTACAGCTTTAAAAAACC
TAGGCGAGAAATGCGACCGGCTGAACAAGAAGTACTTCAAGAAGTCGGAT
GAATACGCGCCTCAGCATATCAGGGAGCTTCTTCAGATTGCAGCTTCCAA
TGCCGATGGCGACTGCGATCGTCACGTGGAGCACTTCCTGAACGGAAAGA
CCGACGTGCAGACTTTCCTCAACACGTACCAGTGGTCGAAGAAGATCAGT
ACCGAGCGCAAGGCCAAAGAGGAGCGCCTGGGCACCCAGCTCAGTGCTCT
GGAGCGGGCCGGTATCTAGAAGCTTTCTAGACCAT
BS18091.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:06:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mod(r)-RF | 603 | CG17828-PF | 1..603 | 17..619 | 3015 | 100 | Plus |
mod(r)-RC | 603 | CG17828-PC | 1..603 | 17..619 | 3015 | 100 | Plus |
mod(r)-RA | 603 | CG17828-PA | 1..603 | 17..619 | 3015 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:06:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mod(r)-RF | 1294 | CG17828-RF | 269..871 | 17..619 | 3015 | 100 | Plus |
mod(r)-RC | 1332 | CG17828-RC | 307..909 | 17..619 | 3015 | 100 | Plus |
mod(r)-RA | 1343 | CG17828-RA | 318..920 | 17..619 | 3015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:05:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 621891..622151 | 17..277 | 1290 | 99.6 | Plus |
X | 23542271 | X | 622433..622628 | 424..619 | 980 | 100 | Plus |
X | 23542271 | X | 622207..622359 | 273..425 | 765 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:05:59 has no hits.
BS18091.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:26:09 Download gff for
BS18091.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mod(r)-RC | 1..603 | 17..619 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:14:59 Download gff for
BS18091.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mod(r)-RC | 301..903 | 17..619 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:12 Download gff for
BS18091.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mod(r)-RA | 318..920 | 17..619 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:26:09 Download gff for
BS18091.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mod(r)-RC | 296..907 | 12..625 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:46 Download gff for
BS18091.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mod(r)-RA | 318..920 | 17..619 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:46 Download gff for
BS18091.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 621891..622146 | 17..272 | 100 | -> | Plus |
X | 622207..622358 | 273..424 | 100 | -> | Plus |
X | 622434..622628 | 425..619 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:12 Download gff for
BS18091.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 515924..516179 | 17..272 | 100 | -> | Plus |
arm_X | 516240..516391 | 273..424 | 100 | -> | Plus |
arm_X | 516467..516661 | 425..619 | 100 | | Plus |
BS18091.3prime Sequence
633 bp (449 high quality bases) assembled on 2007-06-06
> BS18091.3prime
ATGGTCTAGAAAGCTTCTAGATACCGGCCCGCTCCAGAGCACTGAGCTGG
GTGCCCAGGCGCTCCTCTTTGGCCTTGCGCTCGGTACTGATCTTCTTCGA
CCACTGGTACGTGTTGAGGAAAGTCTGCACGTCGGTCTTTCCGTTCAGGA
AGTGCTCCACGTGACGATCGCAGTCGCCATCGGCATTGGAAGCTGCAATC
TGAAGAAGCTCCCTGATATGCTGAGGCGCGTATTCATCCGACTTCTTGAA
GTACTTCTTGTTCAGCCGGTCGCATTTCTCGCCTAGGTTTTTTAAAGCTG
TAAAATCGTCGCTGAGTCGGCGCTTCAGCTCTACCAGATGAATGCCCTTG
CACTCGTTCTCTCTTGATATAATCTCCACCTGGTCCATCATTGAATCGAG
CTCCTCGTTCAGGTACTGCACCACGGACATCTCCTCGATGAAGTCCTCGA
AGAACTCGGGATCCCTGTCCAGCTGTTTCAGTTCGTCCAGCGACAAAGTG
CACAGGTTGGGCAGGTTGTCCGATTCGCCGGCCTCCTGCTCCTTGGCCTC
ACTGCTATCGGTCGGAGGTCTTTGAGCAAGAGAGTGGGCAAGGGCAAGAT
CCTGTGGTGTAGTCGGCATGTCGACTGATAACT
BS18091.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:08:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17828-PA | 603 | mod(r)-RA | 1..603 | 619..17 | 3015 | 100 | Minus |
CG17828-PC | 603 | mod(r)-RC | 1..603 | 619..17 | 3015 | 100 | Minus |
CG17828-PB | 591 | mod(r)-RB | 1..408 | 619..212 | 2040 | 100 | Minus |
CG17828-PD | 591 | mod(r)-RD | 1..408 | 619..212 | 2040 | 100 | Minus |
CG17828-PB | 591 | mod(r)-RB | 408..591 | 200..17 | 920 | 100 | Minus |
CG17828-PD | 591 | mod(r)-RD | 408..591 | 200..17 | 920 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:04:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mod(r)-RF | 1294 | CG17828-RF | 269..871 | 619..17 | 3015 | 100 | Minus |
mod(r)-RC | 1332 | CG17828-RC | 307..909 | 619..17 | 3015 | 100 | Minus |
mod(r)-RA | 1343 | CG17828-RA | 318..920 | 619..17 | 3015 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:04:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 621891..622151 | 619..359 | 1290 | 99.6 | Minus |
X | 23542271 | X | 622433..622628 | 212..17 | 980 | 100 | Minus |
X | 23542271 | X | 622207..622359 | 363..211 | 765 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 22:04:10 has no hits.
BS18091.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:08:36 Download gff for
BS18091.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17828-PC | 1..603 | 17..619 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 03:45:59 Download gff for
BS18091.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mod(r)-RA | 313..924 | 11..624 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:40:42 Download gff for
BS18091.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mod(r)-RA | 313..924 | 11..624 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:40:42 Download gff for
BS18091.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 621886..622146 | 364..624 | 99 | -> | Minus |
X | 622207..622358 | 212..363 | 100 | -> | Minus |
X | 622434..622632 | 11..211 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 03:45:59 Download gff for
BS18091.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 515919..516179 | 364..624 | 99 | -> | Minus |
arm_X | 516240..516391 | 212..363 | 100 | -> | Minus |
arm_X | 516467..516665 | 11..211 | 98 | | Minus |
BS18091.5prime Sequence
633 bp (633 high quality bases) assembled on 2007-06-06
> BS18091.5prime
GAAGTTATCAGTCGACATGCCGACTACACCACAGGATCTTGCCCTTGCCC
ACTCTCTTGCTCAAAGACCTCCGACCGATAGCAGTGAGGCCAAGGAGCAG
GAGGCCGGCGAATCGGACAACCTGCCCAACCTGTGCACTTTGTCGCTGGA
CGAACTGAAACAGCTGGACAGGGATCCCGAGTTCTTCGAGGACTTCATCG
AGGAGATGTCCGTGGTGCAGTACCTGAACGAGGAGCTCGATTCAATGATG
GACCAGGTGGAGATTATATCAAGAGAGAACGAGTGCAAGGGCATTCATCT
GGTAGAGCTGAAGCGCCGACTCAGCGACGATTTTACAGCTTTAAAAAACC
TAGGCGAGAAATGCGACCGGCTGAACAAGAAGTACTTCAAGAAGTCGGAT
GAATACGCGCCTCAGCATATCAGGGAGCTTCTTCAGATTGCAGCTTCCAA
TGCCGATGGCGACTGCGATCGTCACGTGGAGCACTTCCTGAACGGAAAGA
CCGACGTGCAGACTTTCCTCAACACGTACCAGTGGTCGAAGAAGATCAGT
ACCGAGCGCAAGGCCAAAGAGGAGCGCCTGGGCACCCAGCTCAGTGCTCT
GGAGCGGGCCGGTATCTAGAAGCTTTCTAGACC
BS18091.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:08:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17828-PA | 603 | mod(r)-RA | 1..603 | 17..619 | 3015 | 100 | Plus |
CG17828-PC | 603 | mod(r)-RC | 1..603 | 17..619 | 3015 | 100 | Plus |
CG17828-PB | 591 | mod(r)-RB | 1..408 | 17..424 | 2040 | 100 | Plus |
CG17828-PD | 591 | mod(r)-RD | 1..408 | 17..424 | 2040 | 100 | Plus |
CG17828-PB | 591 | mod(r)-RB | 408..591 | 436..619 | 920 | 100 | Plus |
CG17828-PD | 591 | mod(r)-RD | 408..591 | 436..619 | 920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:09:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mod(r)-RF | 1294 | CG17828-RF | 269..871 | 17..619 | 3015 | 100 | Plus |
mod(r)-RC | 1332 | CG17828-RC | 307..909 | 17..619 | 3015 | 100 | Plus |
mod(r)-RA | 1343 | CG17828-RA | 318..920 | 17..619 | 3015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:09:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 621891..622151 | 17..277 | 1290 | 99.6 | Plus |
X | 23542271 | X | 622433..622628 | 424..619 | 980 | 100 | Plus |
X | 23542271 | X | 622207..622359 | 273..425 | 765 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 06:09:52 has no hits.
BS18091.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:08:40 Download gff for
BS18091.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17828-PC | 1..603 | 17..619 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 19:12:53 Download gff for
BS18091.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mod(r)-RA | 313..924 | 12..625 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:11:18 Download gff for
BS18091.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mod(r)-RA | 313..924 | 12..625 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:11:18 Download gff for
BS18091.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 621886..622146 | 12..272 | 99 | -> | Plus |
X | 622207..622358 | 273..424 | 100 | -> | Plus |
X | 622434..622632 | 425..625 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 19:12:53 Download gff for
BS18091.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 515919..516179 | 12..272 | 99 | -> | Plus |
arm_X | 516240..516391 | 273..424 | 100 | -> | Plus |
arm_X | 516467..516665 | 425..625 | 98 | | Plus |
BS18091.pep Sequence
Translation from 16 to 618
> BS18091.pep
MPTTPQDLALAHSLAQRPPTDSSEAKEQEAGESDNLPNLCTLSLDELKQL
DRDPEFFEDFIEEMSVVQYLNEELDSMMDQVEIISRENECKGIHLVELKR
RLSDDFTALKNLGEKCDRLNKKYFKKSDEYAPQHIRELLQIAASNADGDC
DRHVEHFLNGKTDVQTFLNTYQWSKKISTERKAKEERLGTQLSALERAGI
*
BS18091.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:02:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mod(r)-PF | 200 | CG17828-PF | 1..200 | 1..200 | 1034 | 100 | Plus |
mod(r)-PC | 200 | CG17828-PC | 1..200 | 1..200 | 1034 | 100 | Plus |
mod(r)-PA | 200 | CG17828-PA | 1..200 | 1..200 | 1034 | 100 | Plus |
mod(r)-PE | 196 | CG17828-PE | 1..196 | 1..200 | 1001 | 98 | Plus |
mod(r)-PD | 196 | CG17828-PD | 1..196 | 1..200 | 1001 | 98 | Plus |