Clone Sequence Records
BS18096.5prime Sequence
360 bp (360 high quality bases) assembled on 2007-06-06
> BS18096.5prime
GAAGTTATCAGTCGACATGTCAGTACGAGACTTTATCAAGGGTCTGCCCA
TACACGATTCGAGCAATTTTACCCATTTGAGCAACGAACATGGAATTCGA
ACGTCGCAGAAGCGTGCCTCCGTCTACCTGCCCACCGAGGATGAGCATTC
AGAGCAGCTGATCGTGATGGACAAGCGATGTGTCCTGCTGCGCTACCTCA
CTCAGCAGTGGGACAAAAAGACGCTTCAGCGGAAGAGGGAGCACGGCGGC
GATTCGGGAAATGGCAACGGCAACAGCTCCACGCCCAACGGCAACAGCAC
CAACAGCAAAAAGCGCCCGCGCTTGGACCCCAACGAGCTGAACTGAAAGC
TTTCTAGACC
BS18096.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:09:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31855-PA | 330 | CG31855-RA | 1..330 | 17..346 | 1650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:04:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31855-RB | 1126 | CG31855-RB | 198..527 | 17..346 | 1650 | 100 | Plus |
CG31855-RA | 1064 | CG31855-RA | 136..465 | 17..346 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:04:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13369401..13369730 | 17..346 | 1650 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 22:04:34 has no hits.
BS18096.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:09:25 Download gff for
BS18096.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31855-PA | 1..330 | 17..346 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 03:46:05 Download gff for
BS18096.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31855-RA | 130..468 | 10..351 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:40:52 Download gff for
BS18096.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31855-RA | 130..468 | 10..351 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:40:52 Download gff for
BS18096.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13369395..13369733 | 10..351 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 03:46:05 Download gff for
BS18096.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13369395..13369733 | 10..351 | 98 | | Plus |
BS18096.3prime Sequence
365 bp (365 high quality bases) assembled on 2007-06-06
> BS18096.3prime
CACGAATGGTCTAGAAAGCTTTCAGTTCAGCTCGTTGGGGTCCAAGCGCG
GGCGCTTTTTGCTGTTGGTGCTGTTGCCGTTGGGCGTGGAGCTGTTGCCG
TTGCCATTTCCCGAATCGCCGCCGTGCTCCCTCTTCCGCTGAAGCGTCTT
TTTGTCCCACTGCTGAGTGAGGTAGCGCAGCAGGACACATCGCTTGTCCA
TCACGATCAGCTGCTCTGAATGCTCATCCTCGGTGGGCAGGTAGACGGAG
GCACGCTTCTGCGACGTTCGAATTCCATGTTCGTTGCTCAAATGGGTAAA
ATTGCTCGAATCGTGTATGGGCAGACCCTTGATAAAGTCTCGTACTGACA
TGTCGACTGATAACT
BS18096.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:09:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31855-PA | 330 | CG31855-RA | 1..330 | 351..22 | 1650 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:30:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31855-RB | 1126 | CG31855-RB | 198..527 | 351..22 | 1650 | 100 | Minus |
CG31855-RA | 1064 | CG31855-RA | 136..465 | 351..22 | 1650 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:30:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13369401..13369730 | 351..22 | 1650 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:30:48 has no hits.
BS18096.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:09:20 Download gff for
BS18096.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31855-PA | 1..330 | 22..351 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 16:40:48 Download gff for
BS18096.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31855-RA | 130..468 | 17..358 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:46:52 Download gff for
BS18096.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31855-RA | 130..468 | 17..358 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:46:52 Download gff for
BS18096.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13369395..13369733 | 17..358 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 16:40:48 Download gff for
BS18096.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13369395..13369733 | 17..358 | 98 | | Minus |
BS18096.complete Sequence
362 bp assembled on 2007-06-21
GenBank Submission: KX801810
> BS18096.complete
GAAGTTATCAGTCGACATGTCAGTACGAGACTTTATCAAGGGTCTGCCCA
TACACGATTCGAGCAATTTTACCCATTTGAGCAACGAACATGGAATTCGA
ACGTCGCAGAAGCGTGCCTCCGTCTACCTGCCCACCGAGGATGAGCATTC
AGAGCAGCTGATCGTGATGGACAAGCGATGTGTCCTGCTGCGCTACCTCA
CTCAGCAGTGGGACAAAAAGACGCTTCAGCGGAAGAGGGAGCACGGCGGC
GATTCGGGAAATGGCAACGGCAACAGCTCCACGCCCAACGGCAACAGCAC
CAACAGCAAAAAGCGCCCGCGCTTGGACCCCAACGAGCTGAACTGAAAGC
TTTCTAGACCAT
BS18096.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:02:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31855-RB | 330 | CG31855-PB | 1..330 | 17..346 | 1650 | 100 | Plus |
CG31855-RA | 330 | CG31855-PA | 1..330 | 17..346 | 1650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:02:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31855-RB | 1126 | CG31855-RB | 198..527 | 17..346 | 1650 | 100 | Plus |
CG31855-RA | 1064 | CG31855-RA | 136..465 | 17..346 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:02:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13369401..13369730 | 17..346 | 1650 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:02:11 has no hits.
BS18096.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:26:10 Download gff for
BS18096.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31855-RB | 1..330 | 17..346 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:53:35 Download gff for
BS18096.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31855-RB | 203..541 | 10..351 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:21 Download gff for
BS18096.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31855-RA | 136..464 | 17..345 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:26:11 Download gff for
BS18096.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31855-RB | 203..541 | 10..351 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:13:15 Download gff for
BS18096.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31855-RA | 136..464 | 17..345 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:13:15 Download gff for
BS18096.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13369401..13369729 | 17..345 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:21 Download gff for
BS18096.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13369401..13369729 | 17..345 | 100 | | Plus |
BS18096.pep Sequence
Translation from 16 to 345
> BS18096.pep
MSVRDFIKGLPIHDSSNFTHLSNEHGIRTSQKRASVYLPTEDEHSEQLIV
MDKRCVLLRYLTQQWDKKTLQRKREHGGDSGNGNGNSSTPNGNSTNSKKR
PRLDPNELN*
BS18096.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:13:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31855-PB | 109 | CG31855-PB | 1..109 | 1..109 | 580 | 100 | Plus |
CG31855-PA | 109 | CG31855-PA | 1..109 | 1..109 | 580 | 100 | Plus |