Clone BS18103 Report

Search the DGRC for BS18103

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:181
Well:3
Vector:pDNR-Dual
Associated Gene/Transcriptqkr58E-2-RA
Protein status:BS18103.pep: full length peptide match
Sequenced Size:1283

Clone Sequence Records

BS18103.complete Sequence

1283 bp assembled on 2009-12-07

GenBank Submission: KX804533

> BS18103.complete
GAAGTTATCAGTCGACATGGCGGAGAACGGACTGCGCGTGCCAGGGTCAT
CCGCGGTGGCCTCTGCGGTGGCTTCCACTGCGACGGGAGTCGGCGGTGGA
TCAGCAGCGGGAACTGCGGGGGCCGGGACAGGAGTGGTGCCCACCGGCGT
CAGCGGCGGGACGAGCAACGGGGAGCATGAGAACGAACACAACGCCAACG
CAGACGGCGAGAAGGCCCAGCCGGCGCCGGCGGTCCAGAAGTACATGCAG
GAGCTCATGACGGAGCGATCGCGCATGGAAAACCACTTCCCCCTGGCGGT
GAAGCTAATTGACGAAGCTCTGGAGCGTGTGCAGCTAAACGGACGCATTC
CCACGAGAGACCAGTACGCCGATGTCTACCAGCAGCGCACCATCAAGCTG
TCCCAAAAAGTGCACGTGCCCATCAAGGACAAGAAGTTCAACTATGTGGG
CAAGCTACTGGGGCCCAAGGGCAACTCACTGCGTCGCCTGCAGGAGGAGA
CGCAGTGCAAGATCGTCATACTTGGTCGCTTCTCAATGAAGGATCGCGCA
CGTGAGGAGGAGCTGCGCAACTCCGCGGACGCGAAGTACGCCCACCTGAA
TCTTCCTCTGCACGTCGAGGTGTCCACCATTGCTCCGCCCGCCGAGGCGT
ACGCTCGGGTGGCGTATGCCCTGGCCGAGATTCGGCGGTACCTCACGCCG
GACAAGCACGATGACATCCGCCAAGAGCAGTACCGCGAACTCATGGAGGA
TCCGGAGGCGGCCAAGAAGCTGACGCTTCGCCAGCTGCAACAGCAGTCGA
ATGCGGCAGCTAGTGGTGCAGGAGGAGGAGGCGGTGGTGGAGGCGGAAAC
GGAAATGGCGGCGCAGCTGGATCCGGCAGCAATAATGGCAATGGGAACCA
GCGCTCCGGCGGCAACTACAGACAAAAGTTTCAGCAACAATCACACTATC
GCCACAACGAGGAGACTGTCTATTTTCGCTCACACAACAATGCGTACCAC
CAGCCAAAACCCTATGTGCCAGCCGCCCAACGGGGCAATGCCATGCACAC
CACCTTGCCACCGCAAGCAATTGTGCGAGCCTCACCGCCCGGAATGGTCG
TCAGTGCGGCCAGCTTCAATGGCCGAAATGCCGGACTGGGTAATGCCGGC
GGTGGCGGAATCATGGCCAATAGCATCGTGGCCACCACTGGCGGTGGCAT
CGGTGGCGCTGTGCCGCCTAACATGCGTTACCGTCCCGCTGCCCCCTACC
AGTTTGTCAAGAAATAAAAGCTTTCTAGACCAT

BS18103.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:35:51
Subject Length Description Subject Range Query Range Score Percent Strand
qkr58E-2-RB 1251 CG5821-PB 1..1251 17..1267 6255 100 Plus
qkr58E-2-RC 1251 CG5821-PC 1..1251 17..1267 6255 100 Plus
qkr58E-2-RA 1251 CG5821-PA 1..1251 17..1267 6255 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:35:53
Subject Length Description Subject Range Query Range Score Percent Strand
qkr58E-2-RB 2947 CG5821-RB 258..1508 17..1267 6255 100 Plus
qkr58E-2-RC 2907 CG5821-RC 507..1757 17..1267 6255 100 Plus
qkr58E-2-RA 2658 CG5821-RA 258..1508 17..1267 6255 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:35:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22416426..22417031 316..921 3030 100 Plus
2R 25286936 2R 22416066..22416366 17..317 1505 100 Plus
2R 25286936 2R 22417249..22417496 1020..1267 1240 100 Plus
2R 25286936 2R 22417091..22417196 917..1022 530 100 Plus
2R 25286936 2R 21773807..21773885 435..513 245 87.3 Plus
2R 25286936 2R 22410975..22411039 513..449 235 90.8 Minus
2R 25286936 2R 22595165..22595235 449..519 235 88.7 Plus
2L 23513712 2L 20863694..20863758 513..449 220 89.2 Minus
Blast to na_te.dros performed on 2014-11-28 01:35:51 has no hits.

BS18103.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:26:12 Download gff for BS18103.complete
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 1..1251 17..1267 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:39:44 Download gff for BS18103.complete
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 254..1495 17..1258 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:52:15 Download gff for BS18103.complete
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 258..1499 17..1258 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:26:12 Download gff for BS18103.complete
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 254..1504 17..1267 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:52:21 Download gff for BS18103.complete
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 258..1499 17..1258 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:52:21 Download gff for BS18103.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22417252..22417487 1023..1258 100   Plus
2R 22416066..22416366 17..317 100 -> Plus
2R 22416428..22417031 318..921 100 -> Plus
2R 22417096..22417196 922..1022 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:52:15 Download gff for BS18103.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18303571..18303871 17..317 100 -> Plus
arm_2R 18303933..18304536 318..921 100 -> Plus
arm_2R 18304601..18304701 922..1022 100 -> Plus
arm_2R 18304757..18304992 1023..1258 100   Plus

BS18103.3prime Sequence

880 bp (764 high quality bases) assembled on 2007-06-06

> BS18103.3prime
ATGGTCTAGAAAGCTTTTATTTCTTGACAAACTGGTAGGGGGCAGCGGGA
CGGTAACGCATGTTAGGCGGCACAGCGCCACCGATGCCACCGCCAGTGGT
GGCCACGATGCTATTGGCCATGATTCCGCCACCGCCGGCATTACCCAGTC
CGGCATTTCGGCCATTGAAGCTGGCCGCACTGACGACCATTCCGGGCGGT
GAGGCTCGCACAATTGCTTGCGGTGGCAAGGTGGTGTGCATGGCATTGCC
CCGTTGGGCGGCTGGCACATAGGGTTTTGGCTGGTGGTACGCATTGTTGT
GTGAGCGAAAATAGACAGTCTCCTCGTTGTGGCGATAGTGTGATTGTTGC
TGAAACTTTTGTCTGTAGTTGCCGCCGGAGCGCTGGTTCCCATTGCCATT
ATTGCTGCCGGATCCAGCTGCGCCGCCATTTCCGTTTCCGCCTCCACCAC
CGCCTCCTCCTCCTGCACCACTAGCTGCCGCATTCGACTGCTGTTGCAGC
TGGCGAAGCGTCAGCTTCTTGGCCGCCTCCGGATCCTCCATGAGTTCGCG
GTACTGCTCTTGGCGGATGTCATCGTGCTTGTCCGGCGTGAGGTACCGCC
GAATCTCGGCCAGGGCATACGCCACCCGAGCGTACGCCTCGGCGGGCGGA
GCAATGGTGGACACCTCGACGTGCAGAGGAAGATTCAGGTGGGCGTACTT
CGCGTCCGCGGAGTTGCGCAGCTCCTCCTCACGTGCGCGATCCTTCATTG
AGAAGCGACCAAGTATGACGATCTTGCACTGCGTCTCCTCCTGCAGGCGA
CGCAGTGAGTTGCCCTTGGGCCCCAGTAGCTTGCCCACATAGTTGAACTT
CTTGTCCTTGATGGGCACGTGCACTTTTTG

BS18103.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:09:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG5821-PA 1251 qkr58E-2-RA 388..1251 880..17 4320 100 Minus
CG4021-PA 960 CG4021-RA 313..368 826..771 180 92.8 Minus
CG3584-PA 963 qkr58E-3-RA 310..365 826..771 180 92.8 Minus
CG3927-PA 813 CG3927-RA 307..365 823..765 170 91.5 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:19:46
Subject Length Description Subject Range Query Range Score Percent Strand
qkr58E-2-RB 2947 CG5821-RB 645..1508 880..17 4320 100 Minus
qkr58E-2-RC 2907 CG5821-RC 894..1757 880..17 4320 100 Minus
qkr58E-2-RA 2658 CG5821-RA 645..1508 880..17 4320 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:19:42
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22416514..22417031 880..363 2590 100 Minus
2R 25286936 2R 22417249..22417496 264..17 1240 100 Minus
2R 25286936 2R 22417091..22417196 367..262 530 100 Minus
2R 25286936 2R 21773807..21773885 849..771 245 87.3 Minus
2R 25286936 2R 22410975..22411039 771..835 235 90.8 Plus
2R 25286936 2R 22595165..22595235 835..765 235 88.7 Minus
2L 23513712 2L 20863694..20863758 771..835 220 89.2 Plus
Blast to na_te.dros performed on 2015-02-12 05:19:44 has no hits.

BS18103.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:09:49 Download gff for BS18103.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5821-PA 388..1251 17..880 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 07:16:34 Download gff for BS18103.3prime
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 645..1508 17..880 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:30:35 Download gff for BS18103.3prime
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 645..1508 17..880 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:30:35 Download gff for BS18103.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 22416514..22417031 363..880 100 -> Minus
2R 22417096..22417196 262..362 100 -> Minus
2R 22417252..22417496 17..261 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 07:16:34 Download gff for BS18103.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18304019..18304536 363..880 100 -> Minus
arm_2R 18304601..18304701 262..362 100 -> Minus
arm_2R 18304757..18305001 17..261 100   Minus

BS18103.5prime Sequence

862 bp (811 high quality bases) assembled on 2007-06-06

> BS18103.5prime
GAAGTTATCAGTCGACATGGCGGAGAACGGACTGCGCGTGCCAGGGTCAT
CCGCGGTGGCCTCTGCGGTGGCTTCCACTGCGACGGGAGTCGGCGGTGGA
TCAGCAGCGGGAACTGCGGGGGCCGGGACAGGAGTGGTGCCCACCGGCGT
CAGCGGCGGGACGAGCAACGGGGAGCATGAGAACGAACACAACGCCAACG
CAGACGGCGAGAAGGCCCAGCCGGCGCCGGCGGTCCAGAAGTACATGCAG
GAGCTCATGACGGAGCGATCGCGCATGGAAAACCACTTCCCCCTGGCGGT
GAAGCTAATTGACGAAGCTCTGGAGCGTGTGCAGCTAAACGGACGCATTC
CCACGAGAGACCAGTACGCCGATGTCTACCAGCAGCGCACCATCAAGCTG
TCCCAAAAAGTGCACGTGCCCATCAAGGACAAGAAGTTCAACTATGTGGG
CAAGCTACTGGGGCCCAAGGGCAACTCACTGCGTCGCCTGCAGGAGGAGA
CGCAGTGCAAGATCGTCATACTTGGTCGCTTCTCAATGAAGGATCGCGCA
CGTGAGGAGGAGCTGCGCAACTCCGCGGACGCGAAGTACGCCCACCTGAA
TCTTCCTCTGCACGTCGAGGTGTCCACCATTGCTCCGCCCGCCGAGGCGT
ACGCTCGGGTGGCGTATGCCCTGGCCGAGATTCGGCGGTACCTCACGCCG
GACAAGCACGATGACATCCGCCAAGAGCAGTACCGCGAACTCATGGAGGA
TCCGGAGGCGGCCAAGAAGCTGACGCTTCGCCAGCTGCAACAGCAGTCGA
ATGCGGCAGCTAGTGGTGCAAGAGGAGGAGGCGGTGGTGGAAGCGGAAAC
GGAAATGGCGGC

BS18103.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:09:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG5821-PA 1251 qkr58E-2-RA 1..846 17..862 4180 99.7 Plus
CG4021-PA 960 CG4021-RA 313..368 458..513 180 92.8 Plus
CG3584-PA 963 qkr58E-3-RA 310..365 458..513 180 92.8 Plus
CG3927-PA 813 CG3927-RA 307..365 461..519 170 91.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:18:49
Subject Length Description Subject Range Query Range Score Percent Strand
qkr58E-2-RB 2947 CG5821-RB 258..1103 17..862 4200 99.8 Plus
qkr58E-2-RC 2907 CG5821-RC 507..1352 17..862 4200 99.8 Plus
qkr58E-2-RA 2658 CG5821-RA 258..1103 17..862 4200 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:18:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22416426..22416972 316..862 2705 99.6 Plus
2R 25286936 2R 22416066..22416366 17..317 1505 100 Plus
2R 25286936 2R 21773807..21773885 435..513 245 87.3 Plus
2R 25286936 2R 22410975..22411039 513..449 235 90.8 Minus
2R 25286936 2R 22595165..22595235 449..519 235 88.7 Plus
2L 23513712 2L 20863694..20863758 513..449 220 89.2 Minus
Blast to na_te.dros performed on 2015-02-11 05:18:48 has no hits.

BS18103.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:09:54 Download gff for BS18103.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5821-PA 1..846 17..862 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 09:49:20 Download gff for BS18103.5prime
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 258..1103 17..862 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:46:30 Download gff for BS18103.5prime
Subject Subject Range Query Range Percent Splice Strand
qkr58E-2-RA 258..1103 17..862 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:46:30 Download gff for BS18103.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 22416066..22416366 17..317 100 -> Plus
2R 22416428..22416972 318..862 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 09:49:20 Download gff for BS18103.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18303571..18303871 17..317 100 -> Plus
arm_2R 18303933..18304477 318..862 99   Plus

BS18103.pep Sequence

Translation from 16 to 1266

> BS18103.pep
MAENGLRVPGSSAVASAVASTATGVGGGSAAGTAGAGTGVVPTGVSGGTS
NGEHENEHNANADGEKAQPAPAVQKYMQELMTERSRMENHFPLAVKLIDE
ALERVQLNGRIPTRDQYADVYQQRTIKLSQKVHVPIKDKKFNYVGKLLGP
KGNSLRRLQEETQCKIVILGRFSMKDRAREEELRNSADAKYAHLNLPLHV
EVSTIAPPAEAYARVAYALAEIRRYLTPDKHDDIRQEQYRELMEDPEAAK
KLTLRQLQQQSNAAASGAGGGGGGGGGNGNGGAAGSGSNNGNGNQRSGGN
YRQKFQQQSHYRHNEETVYFRSHNNAYHQPKPYVPAAQRGNAMHTTLPPQ
AIVRASPPGMVVSAASFNGRNAGLGNAGGGGIMANSIVATTGGGIGGAVP
PNMRYRPAAPYQFVKK*

BS18103.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:57:59
Subject Length Description Subject Range Query Range Score Percent Strand
qkr58E-2-PB 416 CG5821-PB 1..416 1..416 2160 100 Plus
qkr58E-2-PC 416 CG5821-PC 1..416 1..416 2160 100 Plus
qkr58E-2-PA 416 CG5821-PA 1..416 1..416 2160 100 Plus
qkr54B-PD 428 CG4816-PD 33..295 44..314 630 48.6 Plus
qkr54B-PB 428 CG4816-PB 33..295 44..314 630 48.6 Plus