Clone Sequence Records
BS18118.complete Sequence
569 bp assembled on 2010-02-09
GenBank Submission: KX802297
> BS18118.complete
GAAGTTATCAGTCGACATGCTAAGAACTTTTGTGACAAGCGCGCTGCGAA
GCGTTTGCCGCCAGTCGCCGGCTGCATCTTCGTTGGTTCCTCTGGTCCAG
CGGACACAACGTGCCACTTTGATGACTCTATCCCGTCCGTGCCTGTTGCC
CACGCCATCACTGGCATCTCCTGCTCATCACCAGCTCCTGCAGCTGCCGG
GTGTGCTAGCAGCCACAGGAACACCATCAAACACACGCAACGTGACCAAA
TTCTCGCTGGTGAAGGGTAAACGAAAGACCGTCAAGGCGGTACTGAAACG
TTTTAAGCGCCTGGACTGGGGCGCCTGGATACGCACCCATTCCGGTCGCC
AAAAGAAGCTCTTCAAGAAATCCGCAGCTTTACGACGCCGCCTCAAGCAG
CACGTCTTCACCAATGCCACGCAGAGCTGGCTGCTGGACAAGATGGTCAC
CAGCTATTGGCGGCGCCCAAAGCATTTCATCAACGATCCCTATAAGCCCT
ATCACAGCCGCAACGAGTACTACGCCACACAGTCAAAGACCTTTAAGGTG
TGAAAGCTTTCTAGACCAT
BS18118.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:06:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL35-RA | 537 | CG13410-PA | 1..537 | 17..553 | 2685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:06:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL35-RA | 751 | CG13410-RA | 82..618 | 17..553 | 2685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:06:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22023696..22024208 | 41..553 | 2565 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:06:04 has no hits.
BS18118.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:26:13 Download gff for
BS18118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL35-RA | 1..537 | 17..553 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:15:02 Download gff for
BS18118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL35-RA | 65..600 | 17..552 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:13 Download gff for
BS18118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL35-RA | 82..617 | 17..552 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:26:13 Download gff for
BS18118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL35-RA | 53..604 | 4..558 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:49 Download gff for
BS18118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL35-RA | 82..617 | 17..552 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:49 Download gff for
BS18118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22023608..22023632 | 17..41 | 100 | -> | Plus |
| 3R | 22023697..22024207 | 42..552 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:13 Download gff for
BS18118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17849330..17849354 | 17..41 | 100 | -> | Plus |
| arm_3R | 17849419..17849929 | 42..552 | 100 | | Plus |
BS18118.3prime Sequence
567 bp (567 high quality bases) assembled on 2007-06-06
> BS18118.3prime
ATGGTCTAGAAAGCTTTCACACCTTAAAGGTCTTTGACTGTGTGGCGTAG
TACTCGTTGCGGCTGTGATAGGGCTTATAGGGATCGTTGATGAAATGCTT
TGGGCGCCGCCAATAGCTGGTGACCATCTTGTCCAGCAGCCAGCTCTGCG
TGGCATTGGTGAAGACGTGCTGCTTGAGGCGGCGTCGTAAAGCTGCGGAT
TTCTTGAAGAGCTTCTTTTGGCGACCGGAATGGGTGCGTATCCAGGCGCC
CCAGTCCAGGCGCTTAAAACGTTTCAGTACCGCCTTGACGGTCTTTCGTT
TACCCTTCACCAGCGAGAATTTGGTCACGTTGCGTGTGTTTGATGGTGTT
CCTGTGGCTGCTAGCACACCCGGCAGCTGCAGGAGCTGGTGATGAGCAGG
AGATGCCAGTGATGGCGTGGGCAACAGGCACGGACGGGATAGAGTCATCA
AAGTGGCACGTTGTGTCCGCTGGACCAGAGGAACCAACGAAGATGCAGCC
GGCGACTGGCGGCAAACGCTTCGCAGCGCGCTTGTCACAAAAGTTCTTAG
CATGTCGACTGATAACT
BS18118.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:11:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13410-PA | 537 | mRpL35-RA | 1..537 | 553..17 | 2685 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:40:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL35-RA | 751 | CG13410-RA | 82..618 | 553..17 | 2685 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:40:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22023696..22024208 | 529..17 | 2565 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:40:11 has no hits.
BS18118.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:11:43 Download gff for
BS18118.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13410-PA | 1..537 | 17..553 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 21:53:55 Download gff for
BS18118.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL35-RA | 69..621 | 12..567 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:19:55 Download gff for
BS18118.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL35-RA | 69..621 | 12..567 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:19:55 Download gff for
BS18118.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22023697..22024211 | 12..528 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 21:53:55 Download gff for
BS18118.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17849419..17849933 | 12..528 | 99 | | Minus |
BS18118.5prime Sequence
567 bp (567 high quality bases) assembled on 2007-06-06
> BS18118.5prime
GAAGTTATCACTCGACATGCTAAGAACTTTTGTGACAAGCGCGCTGCGAA
GCGTTTGCCGCCAGTCGCCGGCTGCATCTTCGTTGGTTCCTCTGGTCCAG
CGGACACAACGTGCCACTTTGATGACTCTATCCCGTCCGTGCCTGTTGCC
CACGCCATCACTGGCATCTCCTGCTCATCACCAGCTCCTGCAGCTGCCGG
GTGTGCTAGCAGCCACAGGAACACCATCAAACACACGCAACGTGACCAAA
TTCTCGCTGGTGAAGGGTAAACGAAAGACCGTCAAGGCGGTACTGAAACG
TTTTAAGCGCCTGGACTGGGGCGCCTGGATACGCACCCATTCCGGTCGCC
AAAAGAAGCTCTTCAAGAAATCCGCAGCTTTACGACGCCGCCTCAAGCAG
CACGTCTTCACCAATGCCACGCAGAGCTGGCTGCTGGACAAGATGGTCAC
CAGCTATTGGCGGCGCCCAAAGCATTTCATCAACGATCCCTATAAGCCCT
ATCACAGCCGCAACGAGTACTACGCCACACAGTCAAAGACCTTTAAGGTG
TGAAAGCTTTCTAGACC
BS18118.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:11:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13410-PA | 537 | mRpL35-RA | 1..537 | 17..553 | 2685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:47:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL35-RA | 751 | CG13410-RA | 82..618 | 17..553 | 2685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:47:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22023696..22024208 | 41..553 | 2565 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 15:47:56 has no hits.
BS18118.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:11:49 Download gff for
BS18118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13410-PA | 1..537 | 17..553 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 13:57:59 Download gff for
BS18118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL35-RA | 70..621 | 4..558 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:35:17 Download gff for
BS18118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL35-RA | 70..621 | 4..558 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:35:17 Download gff for
BS18118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22023697..22024211 | 42..558 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 13:57:59 Download gff for
BS18118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17849419..17849933 | 42..558 | 99 | | Plus |
BS18118.pep Sequence
Translation from 16 to 552
> BS18118.pep
MLRTFVTSALRSVCRQSPAASSLVPLVQRTQRATLMTLSRPCLLPTPSLA
SPAHHQLLQLPGVLAATGTPSNTRNVTKFSLVKGKRKTVKAVLKRFKRLD
WGAWIRTHSGRQKKLFKKSAALRRRLKQHVFTNATQSWLLDKMVTSYWRR
PKHFINDPYKPYHSRNEYYATQSKTFKV*
BS18118.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:02:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL35-PA | 178 | CG13410-PA | 1..178 | 1..178 | 927 | 100 | Plus |
