Clone Sequence Records
BS18146.complete Sequence
545 bp assembled on 2010-02-09
GenBank Submission: KX803366
> BS18146.complete
GAAGTTATCAGTCGACATGATGCTGTTGGCGACTTTGTGTTTGCTCATGC
CGGTAGCCTTGTGCCCAGGTCTTTGGTCCTTGGTCCTTGTTACTGGGTCC
TTGGTCCTCGGTCCTTGGTCCATGCAGTGGCTGGCTTTGATGTTTCGCCA
GGATGATGAATTATATTTGACATCTATGTGCTTGGGCGGCGGTCCTCCTC
CTCCTGCTCCGTCGTTGCTAACATGTGTGTACCCTGCCACATTTGATGCC
ACTCAAACTACAAATACATACGTGTGCATGCGCACCAAAAAACCACCCAG
TTATCCATGCACCCACCCACCTACACTCGCGTCTGATGAGAGCCGCACTT
GGATATGTTTATTTTACTGTCAAAACATTAAAGTAAACTCCCGCCGATGC
CGCCGCACGGGGTTGATTGTTATCAGGGGGCGGTGTCGACAGCGTTGTAC
CTATGCGAGGGTGGAAAACCGATGGAAGGACCATGCCGGGTACTTCGTCC
TCTTGGCCACCTTCGGTTTGACTCCGTAGAAGCTTTCTAGACCAT
BS18146.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-28 03:01:41 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 03:01:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:01:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12642154..12642667 | 17..530 | 2570 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:01:40 has no hits.
BS18146.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:19:36 Download gff for
BS18146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32111-RA | 1..513 | 17..529 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:14:18 Download gff for
BS18146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32111-RA | 1197..1709 | 17..529 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:18 Download gff for
BS18146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32111-RA | 1199..1711 | 17..529 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:19:36 Download gff for
BS18146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32111-RA | 1197..1710 | 17..530 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:03 Download gff for
BS18146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12642154..12642666 | 17..529 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:03 Download gff for
BS18146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12642154..12642666 | 17..529 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:18 Download gff for
BS18146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12635254..12635766 | 17..529 | 100 | | Plus |
BS18146.3prime Sequence
543 bp (543 high quality bases) assembled on 2007-06-06
> BS18146.3prime
ATGGTCTAGAAAGCTTCTACCGATTCGGGGCGAAGGTGGCCAAGAGGACG
AAGTACCCGGCATGGTCCTTCCATCGGTTTTCCACCCTCGCATAGGTACA
ACGCTGTCGACACCGCCCCCTGATAACAATCAACCCCGTGCGGCGGCATC
GGCGGGAGTTTACTTTAATGTTTTGACAGTAAAATAAACATATCCAAGTG
CGGCTCTCATCAGACGCGAGTGTAGGTGGGTGGGTGCATGGATAACTGGG
TGGTTTTTTGGTGCGCATGCACACGTATGTATTTGTAGTTTGAGTGGCAT
CAAATGTGGCAGGGTACACACATGTTAGCAACGACGGAGCAGGAGGAGGA
GGACCGCCGCCCAAGCACATAGATGTCAAATATAATTCATCATCCTGGCG
AAACATCAAAGCCAGCCACTGCATGGACCAAGGACCGAGGACCAAGGACC
CAGTAACAAGGACCAAGGACCAAAGACCTGGGCACAAGGCTACCGGCATG
AGCAAACACAAAGTCGCCAACAGCATCATGTCGACTGATAACT
BS18146.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:15:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32111-PA | 513 | CG32111-RA | 1..499 | 529..31 | 2495 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-10 22:40:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:40:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12642154..12642652 | 529..31 | 2495 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:40:09 has no hits.
BS18146.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:15:08 Download gff for
BS18146.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32111-PA | 1..505 | 25..529 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 14:09:07 Download gff for
BS18146.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32111-RA | 1199..1703 | 25..529 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:09:24 Download gff for
BS18146.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12642154..12642658 | 25..529 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:09:24 Download gff for
BS18146.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12642154..12642658 | 25..529 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 14:09:07 Download gff for
BS18146.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12635254..12635758 | 25..529 | 99 | | Minus |
BS18146.5prime Sequence
543 bp (543 high quality bases) assembled on 2007-06-06
> BS18146.5prime
GAAGTTATCACTCTACATGATGCTGTTGGCGACTTTGTGTTTGCTCATGC
CGGTAGCCTTGTGCCCAGGTCTTTGGTCCTTGGTCCTTGTTACTGGGTCC
TTGGTCCTCGGTCCTTGGTCCATGCAGTGGCTGGCTTTGATGTTTCGCCA
GGATGATGAATTATATTTGACATCTATGTGCTTGGGCGGCGGTCCTCCTC
CTCCTGCTCCGTCGTTGCTAACATGTGTGTACCCTGCCACATTTGATGCC
ACTCAAACTACAAATACATACGTGTGCATGCGCACCAAAAAACCACCCAG
TTATCCATGCACCCACCCACCTACACTCGCGTCTGATGAGAGCCGCACTT
GGATATGTTTATTTTACTGTCAAAACATTAAAGTAAACTCCCGCCGATGC
CGCCGCACGGGGTTGATTGTTATCAGGGGGCGGTGTCGACAGCGTTGTAC
CTATGCGAGGGTGGAAAACCGATGGAAGGACCATGCCGGGTACTTCGTCC
TCTTGGCCACCTTCGGTTTGACTCCGTAGAAGCTTTCTAGACC
BS18146.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:15:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32111-PA | 513 | CG32111-RA | 1..513 | 17..529 | 2565 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-11 17:05:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:05:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12642154..12642667 | 17..530 | 2570 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:05:32 has no hits.
BS18146.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:15:12 Download gff for
BS18146.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32111-PA | 1..513 | 17..529 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 21:57:20 Download gff for
BS18146.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32111-RA | 1192..1712 | 10..530 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:08:48 Download gff for
BS18146.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12642147..12642667 | 10..530 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:08:48 Download gff for
BS18146.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12642147..12642667 | 10..530 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 21:57:20 Download gff for
BS18146.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12635247..12635767 | 10..530 | 99 | | Plus |
BS18146.pep Sequence
Translation from 16 to 528
> BS18146.pep
MMLLATLCLLMPVALCPGLWSLVLVTGSLVLGPWSMQWLALMFRQDDELY
LTSMCLGGGPPPPAPSLLTCVYPATFDATQTTNTYVCMRTKKPPSYPCTH
PPTLASDESRTWICLFYCQNIKVNSRRCRRTGLIVIRGRCRQRCTYARVE
NRWKDHAGYFVLLATFGLTP*
Sequence BS18146.pep has no blast hits.