Clone BS18159 Report

Search the DGRC for BS18159

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:181
Well:59
Vector:pDNR-Dual
Associated Gene/TranscriptCG31278-RA
Protein status:BS18159.pep: full length peptide match
Sequenced Size:749

Clone Sequence Records

BS18159.complete Sequence

749 bp assembled on 2010-02-09

GenBank Submission: KX802260

> BS18159.complete
GAAGTTATCAGTCGACATGCACCTGAAACCACGGATAAAAGTATGCCAAG
CGATTCTGGGACATTGTCGATCCTTTGGAACGAGTCCTCCCGCTAATCAG
TCGTTCAGGAAGTGGTACCAGCACCTGTGGACCACGGAGCGCACAAACTT
GCCGCCATACAACCATTTCACCCAGATTGGTGACCCTGTTCTTAGGCAAC
AAGCGGCTTTGGTGCCCAAGGAGCACATGGCTAGCCCCGAGATTAAGGCC
ATCGTCGAGCGGATGGTCAAGGTGCTAAGGAAGTTCGACTGCGTCGGCAT
TGCGGCTCCTCAGATTGGAGTATCGCTCAGGATCATAGCAATGGAGTTCA
AGGGACGGATCCGAAAGGAGCTGCCCGAGGCCGTTTACCAAGCCCGACAA
ATGTCCGAGTTGCCACTGACTATTTTCATCAATCCCGTCCTGACGGTGAC
CAACTACGCGAAGCTGAAGCATCCAGAAGGATGCATGAGTGTGCGAGGTT
ACTCTGCCGAAGTGGAGCGTTTCGAAGGTGTAAAGCTAACAGGCCTTGAC
CAACTAGGAAACCAAAGCGAACTGGCTCTGAGTGGTTGGAATGCCCGGAT
AGCGCAGCACGAAATGGATCACCTGGAGGGAAAACTATACACCGATCACA
TGGACCGCTCAACCTTTGCGTGCACCTGCTGGGAGGCGGTTAACACGAAA
TCCGGACGCGTGGAGATACCCTTCTACAAGTAGAAGCTTTCTAGACCAT

BS18159.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:03:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG31278-RA 717 CG31278-PA 1..717 17..733 3585 100 Plus
CG31278-RB 438 CG31278-PB 1..405 17..421 2025 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:03:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG31278-RA 872 CG31278-RA 79..795 17..733 3585 100 Plus
CG31278-RB 883 CG31278-RB 79..806 17..733 3440 98.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:03:50
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10707858..10708262 421..17 2025 100 Minus
3R 32079331 3R 10707475..10707786 733..422 1560 100 Minus
Blast to na_te.dros performed on 2014-11-28 03:03:51 has no hits.

BS18159.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:20:56 Download gff for BS18159.complete
Subject Subject Range Query Range Percent Splice Strand
CG31278-RA 1..717 17..733 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:14:32 Download gff for BS18159.complete
Subject Subject Range Query Range Percent Splice Strand
CG31278-RA 65..781 17..733 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:11 Download gff for BS18159.complete
Subject Subject Range Query Range Percent Splice Strand
CG31278-RA 79..795 17..733 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:20:56 Download gff for BS18159.complete
Subject Subject Range Query Range Percent Splice Strand
CG31278-RA 58..781 8..733 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:46 Download gff for BS18159.complete
Subject Subject Range Query Range Percent Splice Strand
CG31278-RA 79..795 17..733 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:46 Download gff for BS18159.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10707475..10707786 422..733 100 <- Minus
3R 10707858..10708262 17..421 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:11 Download gff for BS18159.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6533197..6533508 422..733 100 <- Minus
arm_3R 6533580..6533984 17..421 100   Minus

BS18159.3prime Sequence

747 bp (747 high quality bases) assembled on 2007-06-06

> BS18159.3prime
ATGGTCTAGAAAGCTTCTACTTGTAGAAGGGTATCTCCACGCGTCCGGAT
TTCGTGTTAACCGCCTCCCAGCAGGTGCACGCAAAGGTTGAGCGGTCCAT
GTGATCGGTGTATAGTTTTCCCTCCAGGTGATCCATTTCGTGCTGCGCTA
TCCGGGCATTCCAACCACTCAGAGCCAGTTCGCTTTGGTTTCCTAGTTGG
TCAAGGCCTGTTAGCTTTACACCTTCGAAACGCTCCACTTCGGCAGAGTA
ACCTCGCACACTCATGCATCCTTCTGGATGCTTCAGCTTCGCGTAGTTGG
TCACCGTCAGGACGGGATTGATGAAAATAGTCAGTGGCAACTCGGACATT
TGTCGGGCTTGGTAAACGGCCTCGGGCAGCTCCTTTCGGATCCGTCCCTT
GAACTCCATTGCTATGATCCTGAGCGATACTCCAATCTGAGGAGCCGCAA
TGCCGACGCAGTCGAACTTCCTTAGCACCTTGACCATCCGCTCGACGATG
GCCTTAATCTCGGGGCTAGCCATGTGCTCCTTGGGCACCAAAGCCGCTTG
TTGCCTAAGAACAGGGTCACCAATCTGGGTGAAATGGTTGTATGGCGGCA
AGTTTGTGCGCTCCGTGGTCCACAGGTGCTGGTACCACTTCCTGAACGAC
TGATTAGCGGGAGGACTCGTTCCAAAGGATCGACAATGTCCCAGAATCGC
TTGGCATACTTTTATCCGTGGTTTCAGGTGCATGTCGACTGATAACT

BS18159.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:16:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG31278-PA 717 CG31278-RA 1..717 733..17 3585 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-05 14:20:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG31278-RA 872 CG31278-RA 79..795 733..17 3585 100 Minus
CG31278-RB 883 CG31278-RB 79..806 733..17 3465 98.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-05 14:20:16
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10707858..10708262 329..733 2025 100 Plus
3R 32079331 3R 10707475..10707786 17..328 1560 100 Plus
Blast to na_te.dros performed on 2015-02-05 14:20:20 has no hits.

BS18159.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:16:30 Download gff for BS18159.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31278-PA 1..717 17..733 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 22:12:35 Download gff for BS18159.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31278-RA 72..795 17..742 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 16:18:54 Download gff for BS18159.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31278-RA 72..795 17..742 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 16:18:54 Download gff for BS18159.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 10707475..10707786 17..328 100 <- Plus
3R 10707858..10708269 329..742 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 22:12:35 Download gff for BS18159.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6533197..6533508 17..328 100 <- Plus
arm_3R 6533580..6533991 329..742 99   Plus

BS18159.5prime Sequence

747 bp (747 high quality bases) assembled on 2007-06-06

> BS18159.5prime
NAAGTTATCAGCCTACAGGGGCCTGAAACCACGGATAAAAGTATGCCAAG
CGATTCTGGGACATTGTCGATCCTTTGGAACGAGTCCTCCCGCTAATCAG
TCGTTCAGGAAGTGGTACCAGCACCTGTGGACCACGGAGCGCACAAACTT
GCCGCCATACAACCATTTCACCCAGATTGGTGACCCTGTTCTTAGGCAAC
AAGCGGCTTTGGTGCCCAAGGAGCACATGGCTAGCCCCGAGATTAAGGCC
ATCGTCGAGCGGATGGTCAAGGTGCTAAGGAAGTTCGACTGCGTCGGCAT
TGCGGCTCCTCAGATTGGAGTATCGCTCAGGATCATAGCAATGGAGTTCA
AGGGACGGATCCGAAAGGAGCTGCCCGAGGCCGTTTACCAAGCCCGACAA
ATGTCCGAGTTGCCACTGACTATTTTCATCAATCCCGTCCTGACGGTGAC
CAACTACGCGAAGCTGAAGCATCCAGAAGGATGCATGAGTGTGCGAGGTT
ACTCTGCCGAAGTGGAGCGTTTCGAAGGTGTAAAGCTAACAGGCCTTGAC
CAACTAGGAAACCAAAGCGAACTGGCTCTGAGTGGTTGGAATGCCCGGAT
AGCGCAGCACGAAATGGATCACCTGGAGGGAAAACTATACACCGATCACA
TGGACCGCTCAACCTTTGCGTGCACCTGCTGGGAGGCGGTTAACACGAAA
TCCGGACGCGTGGAGATACCCTTCTACAAGTAGAAGCTTTCTAGACC

BS18159.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:16:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG31278-PA 717 CG31278-RA 6..717 22..733 3560 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-05 14:20:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG31278-RA 872 CG31278-RA 84..795 22..733 3560 100 Plus
CG31278-RB 883 CG31278-RB 84..806 22..733 3440 98.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-05 14:20:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10707858..10708257 421..22 2000 100 Minus
3R 32079331 3R 10707475..10707786 733..422 1560 100 Minus
Blast to na_te.dros performed on 2015-02-05 14:20:47 has no hits.

BS18159.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:16:35 Download gff for BS18159.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31278-PA 1..717 17..733 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 22:12:38 Download gff for BS18159.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31278-RA 84..795 22..733 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-05 16:18:59 Download gff for BS18159.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31278-RA 84..795 22..733 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-05 16:18:59 Download gff for BS18159.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10707475..10707786 422..733 100 <- Minus
3R 10707858..10708257 22..421 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 22:12:38 Download gff for BS18159.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6533197..6533508 422..733 100 <- Minus
arm_3R 6533580..6533979 22..421 100   Minus

BS18159.pep Sequence

Translation from 16 to 732

> BS18159.pep
MHLKPRIKVCQAILGHCRSFGTSPPANQSFRKWYQHLWTTERTNLPPYNH
FTQIGDPVLRQQAALVPKEHMASPEIKAIVERMVKVLRKFDCVGIAAPQI
GVSLRIIAMEFKGRIRKELPEAVYQARQMSELPLTIFINPVLTVTNYAKL
KHPEGCMSVRGYSAEVERFEGVKLTGLDQLGNQSELALSGWNARIAQHEM
DHLEGKLYTDHMDRSTFACTCWEAVNTKSGRVEIPFYK*

BS18159.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:01:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG31278-PA 238 CG31278-PA 1..238 1..238 1264 100 Plus
CG31278-PB 145 CG31278-PB 1..136 1..136 714 99.3 Plus
CG31373-PA 196 CG31373-PA 4..196 46..238 602 58 Plus