BS18202.complete Sequence
1583 bp assembled on 2009-01-22
GenBank Submission: KX803955
> BS18202.complete
GAAGTTATCAGTCGACATGGAATTCTACGATGGCGACCTCAAAGATATAT
GGGACTCCGACTTAGATCCGGAATCCTTGAAAATCAGCCCCGATCACGAT
ATGCACGACTGGCTGTTCGATCGGGACGTCAAAGATCCCACCGTCATACT
CAACGACAAGCTCATCTCGGATGCCCTGCTCAATGGCACACAGCCGATCA
AGACGGAGCACTCCTACAGTCTCAGCAGCGACGTTGACTCCCTGCCCGAT
TCACCAAAAAGCCTCCAGGCCAAGATCGAGGACATGGACGACGAGTGCTT
TCCCGCCATTTCACCGAAGACGGCGACCAATGGGCGCGTGACCATCGATC
CCAAGTACCTCACCTTCCACGTCCCGCCCACGCACGCCACGCCCATCAGC
CGGCTGAGCAGCAATCCCGCCCTAAACACCTCCGTCGCGGATCTAACACG
ATCCTCCGGCCTGCAGAGCCTGCAGGCGCACCAGCCACACCACGGATCCG
GCTCGAGCCACGTGGTGGTGGCCAATCTGGAGCACTTTCAACTACCTCAG
CACCTATACGACAACGACTGCAGCTCCTCGGTGTCGTCGTTGCGGGATGG
CAGCATGTCGCCGGACATTTGCTCCGACATCGAGATCGACGAGTCGGCCA
TCAAGGATGAGCCCATGTCGCCGGACTCCAGCTGCCCCGCCAGTCCCACT
TCTCAAGCGAGCAGCTCGCAGCACCAGCTCAGCCTTAATCTGGCCCACCT
GCAGTCGGAAATGCTATTCGAGCCAAAGCACTGTGGCCTCCTGCTAACCG
CCAGCAGCAACAGCAACAACAGCCTCATAAAGTCCCAGCAGCGCCAGCAG
CAAATCCTTGGCCAGGACAATCTACTGATGGCCAAAATGGAGATCAAGAG
CGAGAAACAGAGCACCAGCAATAGCTCGGACAAATCGCATGCCCACGGCT
ATGGAATCCCGCTGACGCCACCATCCTCCCTGCCCAGCGATGATTCCGAA
GGTAACTTAAGTCCGGAACACCTGTTTGCGCCACTGTCGCCCAACGCAAC
CGTTTCCATCTCTGTGGCCAATCCAGCCGGCGGTGAGTCATCCGTACGGG
TCAGCCGCACCGCTGCCAGCATCACACGCTCGTCCTCCGGATCCGCATCA
GCATCCGGCTCCAGTACCAGCTCAACGGTTACCACGACACGGCAGCCGAT
CCACACGCCGCTGATTAGCTCGCAACCGAAGGGCTCCACTGGGACGCTGT
TGCTGACGGAAGAGGAGAAACGCACTTTGCTGGCCGAAGGGTATCCGATT
CCGCAGAAGCTACCCCTAACCAAAGCCGAGGAGAAATCGCTGAAGAAGAT
TCGACGCAAAATCAAGAATAAAATCTCTGCTCAGGAAAGCCGCCGCAAGA
AGAAGGAGTACATGGACCAGCTGGAGAGGCGCGTCGAGATCCTGGTCACC
GAAAACCATGACTACAAGAAGCGCCTCGAGGGGCTGGAGGAGACCAATGC
CAATCTACTTAGTCAGCTGCACAAACTGCAGGCCCTAGTTAGCAAGCACA
ATGTGAAAAAGTCCTAAAAGCTTTCTAGACCAT
BS18202.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:35:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CrebA-RB | 1551 | CG7450-PB | 1..1551 | 17..1567 | 7755 | 100 | Plus |
| CrebA-RA | 1551 | CG7450-PA | 1..1551 | 17..1567 | 7755 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:35:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CrebA-RB | 4498 | CG7450-RB | 1007..2559 | 16..1568 | 7765 | 100 | Plus |
| CrebA-RA | 3189 | CG7450-RA | 1007..2559 | 16..1568 | 7765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:35:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15549548..15550045 | 281..778 | 2490 | 100 | Plus |
| 3L | 28110227 | 3L | 15550145..15550596 | 777..1228 | 2260 | 100 | Plus |
| 3L | 28110227 | 3L | 15547875..15548086 | 70..281 | 1060 | 100 | Plus |
| 3L | 28110227 | 3L | 15551080..15551275 | 1373..1568 | 980 | 100 | Plus |
| 3L | 28110227 | 3L | 15550863..15551007 | 1228..1372 | 725 | 100 | Plus |
| 3L | 28110227 | 3L | 15536401..15536456 | 16..71 | 280 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 07:35:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6876 | 802..939 | 163 | 61.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6779..6946 | 802..970 | 157 | 58.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6692..6926 | 682..928 | 151 | 59.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2374 | 802..852 | 144 | 78.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..6878 | 802..925 | 144 | 61.9 | Plus |
BS18202.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-01-22 14:52:34 Download gff for
BS18202.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CrebA-RB | 989..2537 | 17..1565 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:23:49 Download gff for
BS18202.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CrebA-RA | 1008..2556 | 17..1565 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:01:13 Download gff for
BS18202.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CrebA-RA | 1008..2556 | 17..1565 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:01:13 Download gff for
BS18202.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15536402..15536455 | 17..70 | 100 | -> | Plus |
| 3L | 15547876..15548086 | 71..281 | 100 | -> | Plus |
| 3L | 15549549..15550045 | 282..778 | 100 | -> | Plus |
| 3L | 15550147..15550596 | 779..1228 | 100 | -> | Plus |
| 3L | 15550864..15551007 | 1229..1372 | 100 | -> | Plus |
| 3L | 15551080..15551272 | 1373..1565 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:23:49 Download gff for
BS18202.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15529502..15529555 | 17..70 | 100 | -> | Plus |
| arm_3L | 15540976..15541186 | 71..281 | 100 | -> | Plus |
| arm_3L | 15542649..15543145 | 282..778 | 100 | -> | Plus |
| arm_3L | 15543247..15543696 | 779..1228 | 100 | -> | Plus |
| arm_3L | 15543964..15544107 | 1229..1372 | 100 | -> | Plus |
| arm_3L | 15544180..15544372 | 1373..1565 | 100 | | Plus |
BS18202.pep Sequence
Translation from 16 to 1566
> BS18202.pep
MEFYDGDLKDIWDSDLDPESLKISPDHDMHDWLFDRDVKDPTVILNDKLI
SDALLNGTQPIKTEHSYSLSSDVDSLPDSPKSLQAKIEDMDDECFPAISP
KTATNGRVTIDPKYLTFHVPPTHATPISRLSSNPALNTSVADLTRSSGLQ
SLQAHQPHHGSGSSHVVVANLEHFQLPQHLYDNDCSSSVSSLRDGSMSPD
ICSDIEIDESAIKDEPMSPDSSCPASPTSQASSSQHQLSLNLAHLQSEML
FEPKHCGLLLTASSNSNNSLIKSQQRQQQILGQDNLLMAKMEIKSEKQST
SNSSDKSHAHGYGIPLTPPSSLPSDDSEGNLSPEHLFAPLSPNATVSISV
ANPAGGESSVRVSRTAASITRSSSGSASASGSSTSSTVTTTRQPIHTPLI
SSQPKGSTGTLLLTEEEKRTLLAEGYPIPQKLPLTKAEEKSLKKIRRKIK
NKISAQESRRKKKEYMDQLERRVEILVTENHDYKKRLEGLEETNANLLSQ
LHKLQALVSKHNVKKS*
BS18202.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:12:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CrebA-PB | 516 | CG7450-PB | 1..516 | 1..516 | 2632 | 100 | Plus |
| CrebA-PA | 516 | CG7450-PA | 1..516 | 1..516 | 2632 | 100 | Plus |
