BS18214.complete Sequence
800 bp assembled on 2009-05-13
GenBank Submission: KX805229
> BS18214.complete
GAAGTTATCAGTCGACATGGATGCGCTAATCCCTTTGTTGACAGACCCAA
AACAAAGGGATTTCCCTATGTGGCTACCTGTACCGCCTACCTACTGTGCT
TATAACCAGGATATCAATCTCGAAGCCAATCATTCAGCAAGCGATCGTCC
AACGAGTCACATCATCACCACAACTCATTCGGAGTCATATTATCGAAATA
CAAAAATGGAGAACTCATCGAGCTACACCCACAAGAAGTTTGCCGTCAGC
AAGCGGAAACGGGAAGTGGACCATGACAAGGAGAACCAAACTCAGCAGTC
GGAACAGCCGATCTTCAAGCGCCGTCAGACACAGGGATTCTTCCGACCTT
GGTTGGATAATGAGCAGAACCAACAGGCGGAGAAGGAGACGTCAACGGCG
GCGAAACCCAGTGGCCCAGGATCCTCGGTCAGCCAGTACCGTGCCAACAT
GGTGCGCCGCAGTAACACCAATCGCCAGCGTAGCCCCAAGGAGCAGATGC
GCCGCGATAGAAACACGCTGGCTTGCCTACTCAGCCGGCGGGCCAAGCAA
GCACAGGAGGAGCAAGTGGGTCAGCAGTACGAGCAGTATCGGAGTCATCA
TGCCGCCATGCTGGAACAGCAGGTGCGCCTTAGTCTATACTACCGCCACA
TCCTACAACAGGCGGTGTTCCAGCGTGCCATAAATCCGGCACCGGGTCAC
ATCCTGCCGCAGCAGCAACAACAGTTCCTCCAGCAGATGGCCCTCTCCCA
GCAGATGCTCATCTTTGGTGGCCAGCACTGCTGAAAGCTTTCTAGACCAT
BS18214.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:40:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16815-RB | 579 | CG16815-PB | 1..579 | 206..784 | 2820 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:40:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16815-RB | 718 | CG16815-RB | 1..653 | 132..784 | 3190 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:40:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13229717..13230484 | 17..784 | 3765 | 99.3 | Plus |
Blast to na_te.dros performed 2014-11-27 10:40:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6845..6877 | 704..736 | 111 | 81.8 | Plus |
BS18214.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:43 Download gff for
BS18214.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16815-RB | 76..842 | 17..783 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:30:34 Download gff for
BS18214.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16815-RB | 1..652 | 132..783 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:27:46 Download gff for
BS18214.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16815-RB | 1..652 | 132..783 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:27:46 Download gff for
BS18214.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13229717..13230483 | 17..783 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:30:34 Download gff for
BS18214.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13229717..13230483 | 17..783 | 99 | | Plus |
BS18214.pep Sequence
Translation from 16 to 783
> BS18214.pep
MDALIPLLTDPKQRDFPMWLPVPPTYCAYNQDINLEANHSASDRPTSHII
TTTHSESYYRNTKMENSSSYTHKKFAVSKRKREVDHDKENQTQQSEQPIF
KRRQTQGFFRPWLDNEQNQQAEKETSTAAKPSGPGSSVSQYRANMVRRSN
TNRQRSPKEQMRRDRNTLACLLSRRAKQAQEEQVGQQYEQYRSHHAAMLE
QQVRLSLYYRHILQQAVFQRAINPAPGHILPQQQQQFLQQMALSQQMLIF
GGQHC*
BS18214.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:58:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16815-PB | 192 | CG16815-PB | 1..192 | 64..255 | 996 | 100 | Plus |
| CG16813-PB | 184 | CG16813-PB | 3..178 | 69..234 | 320 | 44.5 | Plus |
| CG16813-PA | 184 | CG16813-PA | 3..178 | 69..234 | 320 | 44.5 | Plus |
| CG15479-PA | 206 | CG15479-PA | 1..168 | 64..214 | 175 | 29 | Plus |
