BS18225.complete Sequence
890 bp assembled on 2009-05-13
GenBank Submission: KX805583
> BS18225.complete
GAAGTTATCAGTCGACATGGACAACAGCATCGTCGAGGAGAACGGCAACT
CGTCGGCGGCATCGGGCTCCAATGACGTGGTCGATGTCGTTGCCCAACAG
GCGGCGGCAGCGGTGGGCGGCGGCGGTGGAGGAGGAGGAGGCGGCGGCGG
TGGTAACCCCCAGCAGCAGCAACAGAACCCACAAAGTACAACGGCCGGCG
GTCCAACGGGTGCGACGAACAACGCCCAGGGAGGCGGAGTGTCCTCCGTG
CTGACCACCACCGCCAACTGCAACATACAATACCCCATCCAGACGCTGGC
GCAGCACGGACTGCAGGTGCAGTCCGTGATACAGGCCAATCCCTCGGGAG
TCATACAGACAGCAGCTGGAACCCAGCAGCAGCAACAGGCGCTGGCCGCC
GCCACAGCGATGCAGAAGGTGGTCTACGTGGCCAAGCCGCCGAACTCGAC
GGTCATCCACACGACGCCTGGCAATGCAGTGCAAGTGCGTAACAAAATCC
CTCCAACCTTTCCGTGTAAGATCAAGCCCGAACCGAACACGCAGCACCCG
GAGGACAGCGACGAGAGTCTGTCGGACGACGATTCCCAGCACCACCGCAG
CGAGCTGACGCGACGGCCGTCGTACAATAAGATCTTCACCGAGATCAGCG
GTCCGGACATGAGCGACAACAGCGGGATAGCGGAGGATCAGACCCGTAAG
CGCGAGATCCGGCTGCAGAAGAACAGGGAGGCGGCGCGTGAGTGCCGGCG
CAAGAAGAAGGAGTACATCAAGTGCCTGGAGAATCGAGTGGCGGTGCTAG
AGAACCAAAACAAAGCGCTCATCGAGGAGCTGAAGTCGCTCAAGGAGCTC
TACTGTCAGACCAAGAACGATTGAAAGCTTTCTAGACCAT
BS18225.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:46:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CrebB-RF | 858 | CG6103-PF | 1..858 | 17..874 | 4290 | 100 | Plus |
| CrebB-RP | 846 | CG6103-PP | 1..846 | 17..874 | 4075 | 98.6 | Plus |
| CrebB-RO | 846 | CG6103-PO | 1..846 | 17..874 | 4075 | 98.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:46:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CrebB-RF | 2072 | CG6103-RF | 447..1307 | 15..875 | 4305 | 100 | Plus |
| CrebB-RP | 2091 | CG1-RP | 478..1326 | 15..875 | 4090 | 98.6 | Plus |
| CrebB-RO | 2049 | CG6103-RO | 436..1284 | 15..875 | 4090 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:46:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18372131..18372435 | 15..319 | 1525 | 100 | Plus |
| X | 23542271 | X | 18375842..18376052 | 665..875 | 1055 | 100 | Plus |
| X | 23542271 | X | 18373030..18373213 | 313..496 | 920 | 100 | Plus |
| X | 23542271 | X | 18373287..18373455 | 497..665 | 845 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 19:46:48 has no hits.
BS18225.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:44 Download gff for
BS18225.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CrebB-17A-RH | 16..872 | 17..873 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:03:09 Download gff for
BS18225.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CrebB-RF | 307..1163 | 17..873 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:08:13 Download gff for
BS18225.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CrebB-RF | 449..1305 | 17..873 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:08:13 Download gff for
BS18225.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18372133..18372432 | 17..316 | 100 | -> | Plus |
| X | 18373034..18373213 | 317..496 | 100 | -> | Plus |
| X | 18373287..18373455 | 497..665 | 100 | -> | Plus |
| X | 18375843..18376050 | 666..873 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:03:09 Download gff for
BS18225.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18266166..18266465 | 17..316 | 100 | -> | Plus |
| arm_X | 18267067..18267246 | 317..496 | 100 | -> | Plus |
| arm_X | 18267320..18267488 | 497..665 | 100 | -> | Plus |
| arm_X | 18269876..18270083 | 666..873 | 100 | | Plus |
BS18225.pep Sequence
Translation from 16 to 873
> BS18225.pep
MDNSIVEENGNSSAASGSNDVVDVVAQQAAAAVGGGGGGGGGGGGGNPQQ
QQQNPQSTTAGGPTGATNNAQGGGVSSVLTTTANCNIQYPIQTLAQHGLQ
VQSVIQANPSGVIQTAAGTQQQQQALAAATAMQKVVYVAKPPNSTVIHTT
PGNAVQVRNKIPPTFPCKIKPEPNTQHPEDSDESLSDDDSQHHRSELTRR
PSYNKIFTEISGPDMSDNSGIAEDQTRKREIRLQKNREAARECRRKKKEY
IKCLENRVAVLENQNKALIEELKSLKELYCQTKND*
BS18225.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:58:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CrebB-PF | 285 | CG6103-PF | 1..285 | 1..285 | 1471 | 100 | Plus |
| CrebB-PP | 281 | CG6103-PP | 1..281 | 1..285 | 1436 | 98.6 | Plus |
| CrebB-PO | 281 | CG6103-PO | 1..281 | 1..285 | 1436 | 98.6 | Plus |
| CrebB-PJ | 281 | CG6103-PJ | 1..281 | 1..285 | 1436 | 98.6 | Plus |
| CrebB-PN | 327 | CG6103-PN | 1..327 | 1..285 | 1374 | 84.6 | Plus |
