Clone BS18401 Report

Search the DGRC for BS18401

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:184
Well:1
Vector:pDNR-Dual
Associated Gene/TranscriptCG14014-RB
Protein status:BS18401.pep: gold
Sequenced Size:1019

Clone Sequence Records

BS18401.complete Sequence

1019 bp assembled on 2009-05-13

GenBank Submission: KX804855

> BS18401.complete
GAAGTTATCAGTCGACATGGCTCAGTCCACGAATTCCAAGAAGCTGATGA
TGTTCCGCACTCCCAACGAGGAGGAGGCCCTGAAGAATCAGATCTTCATC
TTTAACTCGCCCATTGACTACAAGGACCAGCAGCTGATCGTGTACCAGAA
ACCAGGCATCCTCACCGGAGACAAGGACTACGGCTACTGCGTGGTGTACA
AGCGAGATCACTACGTGCTCAATAACCCGCCCAACTTCAAGAGCCCCACG
AAGAGGAGCTTCCTCAACGAATGCATCCGCCAGTTGTATCTGATGAACGG
CATGGGTCACAAGATGTACTGGAGGACTACAAGTGCAATGGCGCTGAGTA
CACCCGGCGAAGTGTGGCACCAGGTGAACAGTTGCCTGCTCCCAGAACGA
CTGACGCCGCAAAAGGAGAGCCTGAAGCGGGTGAAGAGGCAACTTTTCCG
GGATCCACGGGCAGATCGCAAGAATCCCAACCCACTCAAAGGCAAATGCT
GGGGCACCCAAGTCTTCTGCTTCAAATCGATGCGCGAGAAGATTGGCAGG
AAGTACATCCGCCGGGGCTATCTGACCATCGCACGCCGCGAAGCCCTGCA
GGAGATGATCCGTGAGCACTTGGCACGAGAAATGGTCTGCACTCCGGCCG
CATGCAGAACGGTAATCAGCGCCTCCGACGGAATCTTCAATGTGAATGCC
GGTGTCATCGGCGACATCTGTAGCTACCACAGCCACGCGGCTCGCCATCA
GCCCGTCGTGGAGCGCCGTCTGACGGCCGGCGAAGCACGTCTCCGGAACA
ACGAGGCCTGTCGCCTGACTCAGCGGGCCAAGCGGCTGGAGGCCATGTTC
ATACACGAACAAGTGCGACGGGCCGTCCAGAACCACCAGCTCATTCTGGA
GGAGTCGGTGCGATCCATCTACTATGCCAAGGAGCTCTTCCGCCTTATCG
AGGATCACGAGGAGTTCGTCTACACGGACAACAAGATCCTGTCTAGAATC
TGAAAGCTTTCTAGACCAT

BS18401.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:15:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG14014-RB 987 CG14014-PB 1..987 17..1003 4935 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:15:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14014-RB 1127 CG14014-RB 28..1015 16..1003 4940 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:15:51
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5549821..5550808 1003..16 4940 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:15:52 has no hits.

BS18401.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:44 Download gff for BS18401.complete
Subject Subject Range Query Range Percent Splice Strand
CG14014-RB 29..1014 17..1002 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:44:21 Download gff for BS18401.complete
Subject Subject Range Query Range Percent Splice Strand
CG14014-RB 29..1014 17..1002 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:49:17 Download gff for BS18401.complete
Subject Subject Range Query Range Percent Splice Strand
CG14014-RB 29..1014 17..1002 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:49:17 Download gff for BS18401.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5549822..5550807 17..1002 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:44:21 Download gff for BS18401.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5549822..5550807 17..1002 100   Minus

BS18401.pep Sequence

Translation from 16 to 1002

> BS18401.pep
MAQSTNSKKLMMFRTPNEEEALKNQIFIFNSPIDYKDQQLIVYQKPGILT
GDKDYGYCVVYKRDHYVLNNPPNFKSPTKRSFLNECIRQLYLMNGMGHKM
YWRTTSAMALSTPGEVWHQVNSCLLPERLTPQKESLKRVKRQLFRDPRAD
RKNPNPLKGKCWGTQVFCFKSMREKIGRKYIRRGYLTIARREALQEMIRE
HLAREMVCTPAACRTVISASDGIFNVNAGVIGDICSYHSHAARHQPVVER
RLTAGEARLRNNEACRLTQRAKRLEAMFIHEQVRRAVQNHQLILEESVRS
IYYAKELFRLIEDHEEFVYTDNKILSRI*

BS18401.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:58:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG14014-PB 328 CG14014-PB 1..328 1..328 1732 100 Plus