BS18503.complete Sequence
788 bp assembled on 2012-04-25
GenBank Submission: KX806445
> BS18503.complete
GAAGTTATCAGTCGACATGTTTTCCATGGACAATTTCGACTTGGAGGCCA
CGATGGCGCGCCACTTCTTCGAGGGATCGCAGGCCACCAACGCCTCCACC
TCCAGCTCCGACTATTTTTTTGGGGACGAGCACAGCTCGGAGAGCGATGA
CGAGGACGATGCCTATAGCAGTGGCTTCAACAGCGACCAGGAGAACACCG
AGAAGACCCGGCGGAGCCACAAGCCCCGGCGCTTGAAGTGCGCCTCCCAA
ATGGCCCAGCAGCGGCAGGCGGCCAATCTCCGCGAGCGCCGCCGGATGCA
GAGCATCAACGAGGCGTTCGAGGGTCTGCGCACCCACATTCCCACGCTGC
CCTACGAGAAGCGACTAAGCAAGGTGGACACACTCAAGCTGGCCATAAGC
TACATAACCTTCCTCAGCGAGATGGTCAAGAAGGACAAGAACGGCAACGA
GCCGGGCCTAAGTCTGCAGCGTAACTACCAAAAGGAGCCGCCCAAGAAAA
TTATCCTCAAGGATCGCACTGGCGGCGTGGCGCACTCGTTGTCCTGGTAC
CGCAAGGGTGACCGATATCCGGGCAGTAAGCTCTACGCCAGGACCTGGAC
ACCGGAGGATCCACGGGGACCCCACTCGCAGCCCCTGCCGCTGTACAACA
ACAGCAACTCGAATCAGAATCAAAACAGCAACCAGAGCAGCGACGATTTC
AGCGGAAGTGGTGCGGATATGTCGGATCCTGGAGCTGCGGCCAGTATTTT
CAGCAGCGGCAGTGGCATGTGAAAGCTTTCTAGACCAT
BS18503.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:13:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fer1-RA | 756 | CG33323-PA | 1..756 | 17..772 | 3780 | 100 | Plus |
Fer1-RB | 771 | CG33323-PB | 1..771 | 17..772 | 3595 | 98.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:13:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fer1-RA | 1437 | CG33323-RA | 452..1208 | 16..772 | 3785 | 100 | Plus |
Fer1-RB | 1452 | CG33323-RB | 452..1223 | 16..772 | 3600 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:13:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7141490..7141743 | 519..772 | 1270 | 100 | Plus |
3R | 32079331 | 3R | 7137165..7137356 | 16..207 | 960 | 100 | Plus |
3R | 32079331 | 3R | 7137421..7137588 | 208..375 | 840 | 100 | Plus |
3R | 32079331 | 3R | 7137848..7137994 | 372..518 | 735 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 12:13:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6791..6853 | 646..708 | 134 | 71.9 | Plus |
BS18503.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:15 Download gff for
BS18503.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fer1-RA | 460..1207 | 24..771 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 15:17:37 Download gff for
BS18503.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fer1-RA | 458..1205 | 24..771 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:08 Download gff for
BS18503.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fer1-RA | 460..1207 | 24..771 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:59:52 Download gff for
BS18503.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fer1-RA | 460..1207 | 24..771 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:59:52 Download gff for
BS18503.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7141490..7141742 | 519..771 | 100 | | Plus |
3R | 7137173..7137356 | 24..207 | 100 | -> | Plus |
3R | 7137421..7137586 | 208..373 | 100 | -> | Plus |
3R | 7137850..7137994 | 374..518 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:08 Download gff for
BS18503.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2967212..2967464 | 519..771 | 100 | | Plus |
arm_3R | 2962895..2963078 | 24..207 | 100 | -> | Plus |
arm_3R | 2963143..2963308 | 208..373 | 100 | -> | Plus |
arm_3R | 2963572..2963716 | 374..518 | 100 | -> | Plus |
BS18503.pep Sequence
Translation from 16 to 771
> BS18503.pep
MFSMDNFDLEATMARHFFEGSQATNASTSSSDYFFGDEHSSESDDEDDAY
SSGFNSDQENTEKTRRSHKPRRLKCASQMAQQRQAANLRERRRMQSINEA
FEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMVKKDKNGNEPGLSL
QRNYQKEPPKKIILKDRTGGVAHSLSWYRKGDRYPGSKLYARTWTPEDPR
GPHSQPLPLYNNSNSNQNQNSNQSSDDFSGSGADMSDPGAAASIFSSGSG
M*
BS18503.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:21:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fer1-PA | 251 | CG33323-PA | 1..251 | 1..251 | 1316 | 100 | Plus |
Fer1-PB | 256 | CG33323-PB | 1..256 | 1..251 | 1300 | 98 | Plus |
Fer2-PE | 273 | CG5952-PE | 142..207 | 76..140 | 211 | 63.6 | Plus |
Fer2-PB | 274 | CG5952-PB | 142..207 | 76..140 | 211 | 63.6 | Plus |
Fer2-PC | 279 | CG5952-PC | 142..212 | 76..140 | 206 | 59.2 | Plus |