BS18513.complete Sequence
518 bp assembled on 2012-04-25
GenBank Submission: KX801385
> BS18513.complete
GAAGTTATCAGTCGACATGAGTATGAGCGACGACGACCGCGACATAGACA
TCGAAAGTGACGAGGACGGGGACTCGGACACTGGCTTGGGATCCTCGCGA
CACACAAACACCGCCAATTTCACCCAGGCCGAAAAGCGGGCGCACCACAA
CGCTTTGGAGCGAAGGCGGCGCGATCACATCAAGGAGAGCTTCACCAACC
TGCGTGAGGCGGTGCCCACACTCAAGGGCGAAAAGGCGAGTCGAGCTCAA
ATCCTGAAAAAGACCACCGAATGCATACAGACGATGAGGCGGAAGATCAG
TGAAAACCAGAAAGACATCGAAGAGATCAAGAGGCAAAACAACATAATAG
CTAAGCAGATACAAGCACTGGAGAGTTCAAATGGGGATCAGTTCAGCGAA
TTTCTCAGCGACGAGGAAGTGGGCAGCGAGGAGGCCGACGACGAAGACCT
CGACCAGGACTTCAGTAGACGCAATAAAAAGATGAAGACCTTCCACGCAT
AGAAGCTTTCTAGACCAT
BS18513.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:11:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Max-RD | 486 | CG9648-PD | 1..486 | 17..502 | 2430 | 100 | Plus |
Max-RC | 486 | CG9648-PC | 1..486 | 17..502 | 2430 | 100 | Plus |
Max-RA | 486 | CG9648-PA | 1..486 | 17..502 | 2430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:11:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Max-RD | 1289 | CG9648-RD | 158..645 | 15..502 | 2440 | 100 | Plus |
Max-RC | 822 | CG9648-RC | 158..645 | 15..502 | 2440 | 100 | Plus |
Max-RA | 995 | CG9648-RA | 158..645 | 15..502 | 2440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:11:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19262876..19263018 | 502..360 | 715 | 100 | Minus |
3L | 28110227 | 3L | 19263084..19263209 | 359..234 | 630 | 100 | Minus |
3L | 28110227 | 3L | 19263416..19263526 | 236..126 | 555 | 100 | Minus |
3L | 28110227 | 3L | 19263839..19263905 | 128..62 | 335 | 100 | Minus |
3L | 28110227 | 3L | 19263980..19264027 | 62..15 | 240 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 12:11:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gypsy4 | 6852 | gypsy4 GYPSY4 6852bp | 508..608 | 271..368 | 119 | 60.4 | Plus |
BS18513.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:12 Download gff for
BS18513.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Max-RA | 167..652 | 17..502 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 15:17:31 Download gff for
BS18513.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Max-RA | 167..652 | 17..502 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:31 Download gff for
BS18513.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Max-RA | 160..645 | 17..502 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:59:04 Download gff for
BS18513.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Max-RA | 160..645 | 17..502 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:59:04 Download gff for
BS18513.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19263084..19263207 | 236..359 | 100 | <- | Minus |
3L | 19263417..19263524 | 128..235 | 100 | <- | Minus |
3L | 19263840..19263905 | 62..127 | 100 | <- | Minus |
3L | 19263981..19264025 | 17..61 | 100 | | Minus |
3L | 19262876..19263018 | 360..502 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:31 Download gff for
BS18513.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19255976..19256118 | 360..502 | 100 | <- | Minus |
arm_3L | 19256184..19256307 | 236..359 | 100 | <- | Minus |
arm_3L | 19256517..19256624 | 128..235 | 100 | <- | Minus |
arm_3L | 19256940..19257005 | 62..127 | 100 | <- | Minus |
arm_3L | 19257081..19257125 | 17..61 | 100 | | Minus |
BS18513.pep Sequence
Translation from 16 to 501
> BS18513.pep
MSMSDDDRDIDIESDEDGDSDTGLGSSRHTNTANFTQAEKRAHHNALERR
RRDHIKESFTNLREAVPTLKGEKASRAQILKKTTECIQTMRRKISENQKD
IEEIKRQNNIIAKQIQALESSNGDQFSEFLSDEEVGSEEADDEDLDQDFS
RRNKKMKTFHA*
BS18513.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:21:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Max-PD | 161 | CG9648-PD | 1..161 | 1..161 | 818 | 100 | Plus |
Max-PC | 161 | CG9648-PC | 1..161 | 1..161 | 818 | 100 | Plus |
Max-PA | 161 | CG9648-PA | 1..161 | 1..161 | 818 | 100 | Plus |