BS18941.complete Sequence
1562 bp assembled on 2009-06-08
GenBank Submission: KX804484
> BS18941.complete
GAAGTTATCAGTCGACATGGAAGATCCCACCATAAACGACACGTACGTTC
AGGAGTTTGATCTGCACCACCTGGAGGTGGGCGGAAATGGAGCTGGCCAA
TCGCATGGAGCCGGTGCCGCGTCCCAGGTCACGACTTTGGGCCATGTGAA
GCGCGAGGATCACAGTCCACCGCAGCCGGTGGCGGTTAAATGGACGACAA
TCCACGGCGATCCCACGAATCCGGACGATGACCCGGACTCGCTGCCGCTG
TCCGGACCAGAGCCCGCCGGAGCAGTGGAGGTCTCGCCATCGCCGCACAT
CAAGCTGAGGTCCTTCTCCGGCCATCACCAGTGGCACATGGACGAACGGC
GCCTGCAACCGCTCTCTCCGCCACCAGAGCAGTATGGTCCGCTGCCCGGA
CAGGCGATTCTGGTGAACACATCTTCGGGAGCGGGCGTTCCGGGCGGAGT
GCCCTCAACGCCGCCGGAAACGCCACCAGTAGTGGGCTCGCCCACGGGCA
GCAGCAGCTGTCCGGCTCAGACTTACGCACACCACTATGCGAGGACACCG
GGCAGCTCCGTATCCGTATCCGCCTCCGCCGCCGCCGCAGCTGCTGCCTC
CGCCGGAGCAGCATCGGTGAGTGCCGGACTGAGCCATGACATGATGTGGC
TGACCAACTCGATACGGGCGGACCAGCAGCCGCTGGATCTGCGGCCTTTG
CCCTATCCGGGCTCCCAGGAGGAGGCGGAGGAGTGGGACAGACAGCGGGA
CTACGCCCTGCAGGCGGCGGCAGCTCATCACCACCATCACGGACAGCCGC
TGATGCAGGCGCAGCATCATCCGCATGGACACGGCGGTCATCCCCACCAG
GTGATGCTGCAGCAGAGCAAGTATCCGCACCACCATCACCACCACTTCCA
CAATCTGGAACTGACGCCCATCAACATGCACTCGAACTCGTACGGTAGTG
CTTCGGGTGCCCTGACGCCCACCTGTCTGCCCCAAGTGCCCAGCAACGGG
AGTGGCAGCAGCGGAGGCGGAGGAGGCAGTGGAAGCGGGAGTGGTGGACC
CGGCAGCGTGGGTGGCGGCTCCTGCGTCATCACACGGGCTGCCCTTCAGC
CGTGCCGCCCGCTCTCCGCCAGCTCGACCAGATCCTCGAACAACATGTCG
CCCAGAACCTGTTCGGGTGCCTACAGTAATGCCACGCTGGAGGATTGCCT
CAATGACGACATGCTGACCACGTTGACGGTGCGGGAGCTGAACAAGCGGC
TCCATGGTTGCCCACGGGAGGAGGTAGTGCGTCTGAAGCAGAAGCGACGC
ACCCTGAAGAATCGCGGCTATGCCCAGAACTGCCGGTCCAAGCGACTCCA
TCAGCGCCACGAACTGGAGAAGGCCAACCGGGTGCTCAACCAGGATCTGC
ACCGCCTGAAGCTGGAGTACTCGAGGGTCTGCCAGGAGCGGGATGCCCTC
ATGCAGCGTCTGCAGCGGGCGGCAAATGGCGGAGTCGGTGCGGGAGGTGC
AACCGCCGGCGGCGATAGCCAAAGCTCTCCGGAATTCTACCTCTGAAAGC
TTTCTAGACCAT
BS18941.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:56:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tj-RB | 1536 | CG10034-PB | 7..1536 | 17..1546 | 7650 | 100 | Plus |
| tj-RC | 1668 | CG10034-PC | 7..1536 | 17..1546 | 7650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:56:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tj-RB | 3492 | CG10034-RB | 496..2025 | 17..1546 | 7650 | 100 | Plus |
| tj-RC | 3492 | CG10034-RC | 496..2025 | 17..1546 | 7650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:56:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19464762..19466291 | 17..1546 | 7650 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:56:50 has no hits.
BS18941.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-06-08 11:41:47 Download gff for
BS18941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tj-RA | 1..1529 | 17..1545 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:36:22 Download gff for
BS18941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tj-RC | 496..2024 | 17..1545 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:30:31 Download gff for
BS18941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tj-RC | 496..2024 | 17..1545 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:30:31 Download gff for
BS18941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19464762..19466290 | 17..1545 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:36:22 Download gff for
BS18941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19464762..19466290 | 17..1545 | 100 | | Plus |
BS18941.pep Sequence
Translation from 16 to 1545
> BS18941.pep
MEDPTINDTYVQEFDLHHLEVGGNGAGQSHGAGAASQVTTLGHVKREDHS
PPQPVAVKWTTIHGDPTNPDDDPDSLPLSGPEPAGAVEVSPSPHIKLRSF
SGHHQWHMDERRLQPLSPPPEQYGPLPGQAILVNTSSGAGVPGGVPSTPP
ETPPVVGSPTGSSSCPAQTYAHHYARTPGSSVSVSASAAAAAAASAGAAS
VSAGLSHDMMWLTNSIRADQQPLDLRPLPYPGSQEEAEEWDRQRDYALQA
AAAHHHHHGQPLMQAQHHPHGHGGHPHQVMLQQSKYPHHHHHHFHNLELT
PINMHSNSYGSASGALTPTCLPQVPSNGSGSSGGGGGSGSGSGGPGSVGG
GSCVITRAALQPCRPLSASSTRSSNNMSPRTCSGAYSNATLEDCLNDDML
TTLTVRELNKRLHGCPREEVVRLKQKRRTLKNRGYAQNCRSKRLHQRHEL
EKANRVLNQDLHRLKLEYSRVCQERDALMQRLQRAANGGVGAGGATAGGD
SQSSPEFYL*
BS18941.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:13:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tj-PB | 511 | CG10034-PB | 3..511 | 1..509 | 2749 | 100 | Plus |
| tj-PC | 555 | CG10034-PC | 3..511 | 1..509 | 2749 | 100 | Plus |
| maf-S-PA | 132 | CG9954-PA | 10..116 | 387..480 | 177 | 40.2 | Plus |
| maf-S-PB | 137 | CG9954-PB | 27..121 | 395..480 | 176 | 41.1 | Plus |
| dsx-PF | 427 | CG11094-PF | 135..332 | 246..385 | 167 | 30.8 | Plus |
