BS19025.complete Sequence
1125 bp assembled on 2009-06-08
GenBank Submission: KX801683
> BS19025.complete
GAAGTTATCAGTCGACATGTCCTTCGCGGCTATGGCGAATACCAACACAG
AAAAACTTTACATGCAACTAAGCGCATCGGAATTATCAGCAATTATTATG
AAAGATTCACCCAATTCCAACGACCGTGATGCGGGTTTTTGTTCCGCCAG
TTCGGAAAGCGAAGGCGGAGACGACTTGGTCGTCGAGCACGCGCGCAGTG
GCAGTCCCGACATCAGACCAAAAGGAACAGACTCGGCGGACTCCAAGCCA
ATAGCCCTTGTCCGCAACAAACGCAAGAGTTCGGAACCCTTCAAAGTCGT
AGGTTTGACGACTCCCAACTCTAAATCCATGCCTGGTCCTCCGTCCAGTG
CGAGTATGAATGCAACTGGTCCGCTAAAGAAACGCATACGATACACATCT
TCCGCCGATTCGGCAGTTGTCCTAACGCCACCAGCCATAGACTCTCCACC
GCCCAACAGTTGCATACCTTCCACGTTGCGCCTGCAGCATGAAATAATGC
CTAATCCGGCACATATATATGTTCGCCATCCGGGAGTTACGACTCTTCAC
AGATCGCTTGCTGCCCACCCAGAACAGCTGGAACCACTCGCATTAGTAAC
GACCAAAAAGCAATGTGTCGACCAAGCGGGGCCTAAAATAGAGGCCTTTT
CCGCATTGCTAATTGGAAAACAGCCATCCGCCAAAAAAACGTTGAAGGAA
AGGACGCAAAAAGAATCAACGTCATCTTCCTTTTTAGAAGCTAGTCTTAG
CGATGAGGATCTGAACAAGACGGGATTGGCACCAATTTCGCGACCTCATC
AACATCAACGCAATTACAAGAATATGACTAGGGAGCGCCGCATTGAGGCG
AACGCACGTGAACGGACCCGTGTACACACCATATCCGCCGCCTACGAAAC
GCTCCGCCAAGCTGTTCCAGCCTATGCCAGCACTCAAAAACTTTCCAAAC
TCTCCGTTCTTCGGGTAGCGTGTTCCTATATACTAACCTTAAGTAGAATG
GCTGGCGAGGATTACAGCGCCGATCAATCCGTACCGTCCATTGCCACGTG
CTTAGAAGCTGTAACATCAACCATCCAAACGGAGGGAAAAGTGAAACGAA
AGAAAGACGAGTAAAAGCTTTCTAG
BS19025.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:58:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| net-RC | 1083 | CG11450-PC | 1..1083 | 32..1114 | 5415 | 100 | Plus |
| net-RB | 1083 | CG11450-PB | 1..1083 | 32..1114 | 5415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:58:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| net-RC | 1662 | CG11450-RC | 281..1378 | 17..1114 | 5490 | 100 | Plus |
| net-RB | 2225 | CG11450-RB | 281..1378 | 17..1114 | 5490 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:58:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 83268..84279 | 1114..103 | 5060 | 100 | Minus |
| 2L | 23513712 | 2L | 87020..87107 | 104..17 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:58:54 has no hits.
BS19025.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-06-08 11:41:47 Download gff for
BS19025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| net-RB | 276..1368 | 17..1109 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:37:18 Download gff for
BS19025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| net-RB | 281..1373 | 17..1109 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:31:13 Download gff for
BS19025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| net-RB | 281..1373 | 17..1109 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:31:13 Download gff for
BS19025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 83273..84277 | 105..1109 | 100 | <- | Minus |
| 2L | 87020..87107 | 17..104 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:37:18 Download gff for
BS19025.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 83273..84277 | 105..1109 | 100 | <- | Minus |
| arm_2L | 87020..87107 | 17..104 | 100 | | Minus |
BS19025.pep Sequence
Translation from 16 to 1113
> BS19025.pep
MSFAAMANTNTEKLYMQLSASELSAIIMKDSPNSNDRDAGFCSASSESEG
GDDLVVEHARSGSPDIRPKGTDSADSKPIALVRNKRKSSEPFKVVGLTTP
NSKSMPGPPSSASMNATGPLKKRIRYTSSADSAVVLTPPAIDSPPPNSCI
PSTLRLQHEIMPNPAHIYVRHPGVTTLHRSLAAHPEQLEPLALVTTKKQC
VDQAGPKIEAFSALLIGKQPSAKKTLKERTQKESTSSSFLEASLSDEDLN
KTGLAPISRPHQHQRNYKNMTRERRIEANARERTRVHTISAAYETLRQAV
PAYASTQKLSKLSVLRVACSYILTLSRMAGEDYSADQSVPSIATCLEAVT
STIQTEGKVKRKKDE*
BS19025.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:12:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| net-PC | 360 | CG11450-PC | 1..360 | 6..365 | 1819 | 100 | Plus |
| net-PB | 360 | CG11450-PB | 1..360 | 6..365 | 1819 | 100 | Plus |
