BS19513.complete Sequence
746 bp assembled on 2011-01-27
GenBank Submission: KX803128
> BS19513.complete
GAAGTTATCAGTCGACATGGCTAATCCGTTTCGCTGGTGTCGAGTGTCGC
ACGACTGCGTGTTCCAGATTAATGTGGTTCTGGTGGTGGTCGGAGTGATC
TTTCTGCTTGACGTGCTCAGCCACCTTTATCTGAAGGCGGTCATGTTTCC
AGGCCTTCGTCTATACCCGGTAGCCTTGCGCCCCTGGCTCTTTTGGGTGC
GCGCTTTGACAATGGTTGCCTACATTTTGAACGCTGTTCTTGGGATTCAC
ATGGCCCGACAACCCACCGTCTTGAAGTACGCTGGCTATATGCTCGTTGG
AAGCGTGGTGTTGCTGTACACAATAAGCATCGGAGTGACTCGCTTCATGT
ACCGCAAAAGATTCGAGTTCTTTGCCGAGATGCTGGTGCTGCAGATGTGG
GTGAGAGATAGACTTGGCAAGGTTGAAGTAGAGTTCGAGTGCTGCGGAAG
GTCCAGCGTAGTTGACTACCAGACAGCATCGAGCAACCGCACCTGGCCCA
TTGGCTCTTGCTGCGGGAAGCAGAACTGCACCGGCTGCACTGCGAAGCTT
AGCCAGTACCTGTGGACTATCGAGATGGATGTGGCAAGGGATAATATTAT
CGTATCCGTTCTCTTGTTTGTGGCGATGATCGTCATGGTTTTACACTTTA
AAGATGTGCAATCGCTCGACGACACTAGTGATGTGGATGAGTCTTCAGAA
CTGGTAGACGACTCGGACGCCAAAGAATAAAAGCTTTCTAGACCAT
BS19513.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:47:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tsp42A-RB | 714 | CG14468-PB | 1..714 | 17..730 | 3570 | 100 | Plus |
Tsp42A-RA | 714 | CG14468-PA | 1..714 | 17..730 | 3570 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:47:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tsp42A-RB | 1179 | CG14468-RB | 57..774 | 13..730 | 3575 | 99.9 | Plus |
Tsp42A-RA | 936 | CG14468-RA | 57..774 | 13..730 | 3575 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:47:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 5795469..5796186 | 13..730 | 3575 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:47:42 has no hits.
BS19513.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:03 Download gff for
BS19513.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp42A-RA | 61..765 | 17..721 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:44:42 Download gff for
BS19513.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp42A-RA | 61..765 | 17..721 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:52 Download gff for
BS19513.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp42A-RA | 61..765 | 17..721 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:52 Download gff for
BS19513.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5795473..5796177 | 17..721 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:44:42 Download gff for
BS19513.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 1682978..1683682 | 17..721 | 100 | | Plus |
BS19513.pep Sequence
Translation from 16 to 729
> BS19513.pep
MANPFRWCRVSHDCVFQINVVLVVVGVIFLLDVLSHLYLKAVMFPGLRLY
PVALRPWLFWVRALTMVAYILNAVLGIHMARQPTVLKYAGYMLVGSVVLL
YTISIGVTRFMYRKRFEFFAEMLVLQMWVRDRLGKVEVEFECCGRSSVVD
YQTASSNRTWPIGSCCGKQNCTGCTAKLSQYLWTIEMDVARDNIIVSVLL
FVAMIVMVLHFKDVQSLDDTSDVDESSELVDDSDAKE*
BS19513.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tsp42A-PB | 237 | CG14468-PB | 1..237 | 1..237 | 1236 | 100 | Plus |
Tsp42A-PA | 237 | CG14468-PA | 1..237 | 1..237 | 1236 | 100 | Plus |