BS19516.complete Sequence
164 bp assembled on 2011-01-27
GenBank Submission: KX805329
> BS19516.complete
GAAGTTATCAGTCGACATGGTTTGCAAGGGTTGTGGAACAAACTGCCAGT
GCTCGGCCCAAAAGTGCGGGGACAACTGCGCCTGCAACAAGGATTGCCAG
TGCGTTTGCAAGAATGGGCCCAAGGACCAGTGCTGCAGCAACAAATAAAA
GCTTTCTAGACCAT
BS19516.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:43:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MtnB-RC | 132 | CG4312-PC | 1..132 | 17..148 | 660 | 100 | Plus |
MtnB-RB | 132 | CG4312-PB | 1..132 | 17..148 | 660 | 100 | Plus |
MtnB-RA | 132 | CG4312-PA | 1..132 | 17..148 | 660 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MtnB-RC | 456 | CG4312-RC | 89..220 | 17..148 | 660 | 100 | Plus |
MtnB-RB | 448 | CG4312-RB | 217..348 | 17..148 | 660 | 100 | Plus |
MtnB-RA | 320 | CG4312-RA | 89..220 | 17..148 | 660 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20503338..20503448 | 148..38 | 540 | 99.1 | Minus |
3R | 32079331 | 3R | 20535108..20535202 | 42..136 | 235 | 83.2 | Plus |
3R | 32079331 | 3R | 20360450..20360525 | 62..137 | 200 | 84.2 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:43:49 has no hits.
BS19516.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:54 Download gff for
BS19516.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MtnB-RA | 70..192 | 17..139 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:43:04 Download gff for
BS19516.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MtnB-RA | 89..211 | 17..139 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:25 Download gff for
BS19516.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MtnB-RA | 89..211 | 17..139 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:25 Download gff for
BS19516.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20503347..20503444 | 42..139 | 100 | <- | Minus |
3R | 20503506..20503530 | 17..41 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:43:04 Download gff for
BS19516.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16329069..16329166 | 42..139 | 100 | <- | Minus |
arm_3R | 16329228..16329252 | 17..41 | 100 | | Minus |
BS19516.pep Sequence
Translation from 16 to 147
> BS19516.pep
MVCKGCGTNCQCSAQKCGDNCACNKDCQCVCKNGPKDQCCSNK*
BS19516.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:06:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MtnB-PC | 43 | CG4312-PC | 1..43 | 1..43 | 271 | 100 | Plus |
MtnB-PB | 43 | CG4312-PB | 1..43 | 1..43 | 271 | 100 | Plus |
MtnB-PA | 43 | CG4312-PA | 1..43 | 1..43 | 271 | 100 | Plus |
MtnC-PA | 43 | CG5097-PA | 1..43 | 1..43 | 234 | 81.4 | Plus |
MtnD-PB | 44 | CG33192-PB | 1..43 | 1..43 | 221 | 79.1 | Plus |