BS19517.complete Sequence
500 bp assembled on 2011-01-27
GenBank Submission: KX802731
> BS19517.complete
GAAGTTATCAGTCGACATGGGACAGCCCGGTTTCCGTCGTGCCATTGGGC
ACGTTTCGTTGGTGGTGGCACTGATGTGCACCACCTGTTTCCAAGTGGAA
GGACTACCCCATCCGCCGGCCACGTCGCCGTCACCAATGATGGAAAGAAT
GGTGGAGCAGGCCTACGACGATAAGTTCGACAACGTCGATCTGGACGAGA
TCCTTAACCAAGAGCGACTGTTGATCAACTACATAAAGTGCCTGGAGGGC
ACAGGTCCTTGCACTCCCGATGCCAAGATGTTGAAGGAGATCCTGCCCGA
CGCCATCCAAACCGATTGCACCAAGTGCACGGAGAAGCAGCGGTATGGTG
CTGAAAAGGTGACCCGTCATCTCATCGACAACCGACCCACCGACTGGGAG
CGTCTGGAAAAGATCTACGATCCCGAGGGAACCTACCGCATCAAATACCA
GGAGATGAAGTCCAAGGCCAATGAGGAGCCATAAAAGCTTTCTAGACCAT
BS19517.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:44:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| a10-RA | 468 | CG6642-PA | 1..468 | 17..484 | 2340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:44:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| a10-RA | 567 | CG6642-RA | 21..488 | 17..484 | 2340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:44:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17023451..17023721 | 287..17 | 1355 | 100 | Minus |
| 3L | 28110227 | 3L | 17023202..17023399 | 484..287 | 990 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:44:08 has no hits.
BS19517.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:55 Download gff for
BS19517.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| a10-RA | 21..486 | 17..482 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:43:12 Download gff for
BS19517.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| a10-RA | 21..486 | 17..482 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:30 Download gff for
BS19517.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| a10-RA | 21..486 | 17..482 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:30 Download gff for
BS19517.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17023204..17023398 | 288..482 | 100 | <- | Minus |
| 3L | 17023451..17023721 | 17..287 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:43:12 Download gff for
BS19517.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17016304..17016498 | 288..482 | 100 | <- | Minus |
| arm_3L | 17016551..17016821 | 17..287 | 100 | | Minus |
BS19517.pep Sequence
Translation from 16 to 483
> BS19517.pep
MGQPGFRRAIGHVSLVVALMCTTCFQVEGLPHPPATSPSPMMERMVEQAY
DDKFDNVDLDEILNQERLLINYIKCLEGTGPCTPDAKMLKEILPDAIQTD
CTKCTEKQRYGAEKVTRHLIDNRPTDWERLEKIYDPEGTYRIKYQEMKSK
ANEEP*
BS19517.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:51:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| a10-PA | 155 | CG6642-PA | 1..155 | 1..155 | 837 | 100 | Plus |
| PebIII-PC | 126 | CG11390-PC | 18..116 | 47..145 | 290 | 48.5 | Plus |
| PebIII-PB | 126 | CG11390-PB | 18..116 | 47..145 | 290 | 48.5 | Plus |
| PebIII-PA | 126 | CG11390-PA | 18..116 | 47..145 | 290 | 48.5 | Plus |
| Phk-3-PC | 121 | CG9358-PC | 21..119 | 47..145 | 270 | 46.5 | Plus |
