Clone BS19521 Report

Search the DGRC for BS19521

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:195
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCG14086-RC
Protein status:BS19521.pep: full length peptide match
Sequenced Size:515

Clone Sequence Records

BS19521.complete Sequence

515 bp assembled on 2011-01-27

GenBank Submission: KX802014

> BS19521.complete
GAAGTTATCAGTCGACATGCATGGCTATCGGGCCGGTCTTTATATAGTTT
TTTCAGCCGTGCTGGTAATGTTTATCGAGATCAAGTGGCTTGTGACTATC
TTCCTGCAACTTCAGTGCGCAGAGGATAATTACCAGCGAAGGTCCTGCAG
CTGCTTGGCCTGCTGGCGACTTTCAGCGATTTGTGGCGGTTGGCGACCCA
CTCCTGTTTATGCGGTCATCGGCATCTGCCTGATCCTGTATCCCCACAAT
CTGTGGCTGAGTTATGTGGCCGGGATGTTCCTGATACTCCTCGGACTCCT
CAGACTGTGCACGCTGCTCCGATTCAGCGCCTCGAAGGAGGAGGGTCTCC
TGCCGCAGTGCGACTTTGAAAAGGTGTCGAGCTTTGTGGATACCATGGAG
GATGATTTCGCGGAGATTGGTGCCACGCAAGCGGGATTGGATGAGGAAGC
GGAGGAGGAGGGCGACGACCACACCGCCCTAGACGACGATGTTTGCTAAA
AGCTTTCTAGACCAT

BS19521.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG14086-RD 639 CG14086-PD 151..639 11..499 2430 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14086-RD 1536 CG14086-RD 953..1441 11..499 2430 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:19
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19279385..19279634 124..373 1250 100 Plus
3L 28110227 3L 19279698..19279824 373..499 635 100 Plus
3L 28110227 3L 19279040..19279115 49..124 380 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:45:20 has no hits.

BS19521.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:57 Download gff for BS19521.complete
Subject Subject Range Query Range Percent Splice Strand
CG14086-RB 3168..3648 17..497 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:43:42 Download gff for BS19521.complete
Subject Subject Range Query Range Percent Splice Strand
CG14086-RC 157..629 17..497 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:59 Download gff for BS19521.complete
Subject Subject Range Query Range Percent Splice Strand
CG14086-RD 959..1439 17..497 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:59 Download gff for BS19521.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19279385..19279633 124..372 100 -> Plus
3L 19279698..19279822 373..497 100   Plus
3L 19278958..19278989 17..48 100 -> Plus
3L 19279040..19279114 49..123 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:43:42 Download gff for BS19521.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19272485..19272733 124..372 100 -> Plus
arm_3L 19272798..19272922 373..497 100   Plus
arm_3L 19272058..19272089 17..48 100 -> Plus
arm_3L 19272140..19272214 49..123 100 -> Plus

BS19521.pep Sequence

Translation from 16 to 498

> BS19521.pep
MHGYRAGLYIVFSAVLVMFIEIKWLVTIFLQLQCAEDNYQRRSCSCLACW
RLSAICGGWRPTPVYAVIGICLILYPHNLWLSYVAGMFLILLGLLRLCTL
LRFSASKEEGLLPQCDFEKVSSFVDTMEDDFAEIGATQAGLDEEAEEEGD
DHTALDDDVC*

BS19521.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:51:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG14086-PD 212 CG14086-PD 53..212 1..160 856 100 Plus