BS19521.complete Sequence
515 bp assembled on 2011-01-27
GenBank Submission: KX802014
> BS19521.complete
GAAGTTATCAGTCGACATGCATGGCTATCGGGCCGGTCTTTATATAGTTT
TTTCAGCCGTGCTGGTAATGTTTATCGAGATCAAGTGGCTTGTGACTATC
TTCCTGCAACTTCAGTGCGCAGAGGATAATTACCAGCGAAGGTCCTGCAG
CTGCTTGGCCTGCTGGCGACTTTCAGCGATTTGTGGCGGTTGGCGACCCA
CTCCTGTTTATGCGGTCATCGGCATCTGCCTGATCCTGTATCCCCACAAT
CTGTGGCTGAGTTATGTGGCCGGGATGTTCCTGATACTCCTCGGACTCCT
CAGACTGTGCACGCTGCTCCGATTCAGCGCCTCGAAGGAGGAGGGTCTCC
TGCCGCAGTGCGACTTTGAAAAGGTGTCGAGCTTTGTGGATACCATGGAG
GATGATTTCGCGGAGATTGGTGCCACGCAAGCGGGATTGGATGAGGAAGC
GGAGGAGGAGGGCGACGACCACACCGCCCTAGACGACGATGTTTGCTAAA
AGCTTTCTAGACCAT
BS19521.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14086-RD | 639 | CG14086-PD | 151..639 | 11..499 | 2430 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14086-RD | 1536 | CG14086-RD | 953..1441 | 11..499 | 2430 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19279385..19279634 | 124..373 | 1250 | 100 | Plus |
3L | 28110227 | 3L | 19279698..19279824 | 373..499 | 635 | 100 | Plus |
3L | 28110227 | 3L | 19279040..19279115 | 49..124 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:45:20 has no hits.
BS19521.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:57 Download gff for
BS19521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14086-RB | 3168..3648 | 17..497 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:43:42 Download gff for
BS19521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14086-RC | 157..629 | 17..497 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:59 Download gff for
BS19521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14086-RD | 959..1439 | 17..497 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:59 Download gff for
BS19521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19279385..19279633 | 124..372 | 100 | -> | Plus |
3L | 19279698..19279822 | 373..497 | 100 | | Plus |
3L | 19278958..19278989 | 17..48 | 100 | -> | Plus |
3L | 19279040..19279114 | 49..123 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:43:42 Download gff for
BS19521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19272485..19272733 | 124..372 | 100 | -> | Plus |
arm_3L | 19272798..19272922 | 373..497 | 100 | | Plus |
arm_3L | 19272058..19272089 | 17..48 | 100 | -> | Plus |
arm_3L | 19272140..19272214 | 49..123 | 100 | -> | Plus |
BS19521.pep Sequence
Translation from 16 to 498
> BS19521.pep
MHGYRAGLYIVFSAVLVMFIEIKWLVTIFLQLQCAEDNYQRRSCSCLACW
RLSAICGGWRPTPVYAVIGICLILYPHNLWLSYVAGMFLILLGLLRLCTL
LRFSASKEEGLLPQCDFEKVSSFVDTMEDDFAEIGATQAGLDEEAEEEGD
DHTALDDDVC*
BS19521.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:51:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14086-PD | 212 | CG14086-PD | 53..212 | 1..160 | 856 | 100 | Plus |