BS19522.complete Sequence
624 bp assembled on 2011-01-27
GenBank Submission: KX803758
> BS19522.complete
GAAGTTATCAGTCGACATAATCGGCGGTCTGCAAGTTACTCTGCGATTTT
GGAAACATGTGGAAGCTGGACACCAAAGGAGGAATCATCTGCTCGGGCTG
CCTGTCCATAGCCTTTGCCATAACCTATCTGGTTTTGATGGACGATTACT
TCTGGAAATATGGACTCTACGAGATGGGAATACACATTTCGGCGCTGCAG
ATCTTGGGAAGCGTGGTCCTCATCGTTGGAGCCATAAAGCAAAAGCACAA
GTTCTTCGTGCCGTGGATGATAACCACAGGATTCTTTTTATACCTGATGG
TGAACCTGTTCATTTCACTGATAGTCCAGGGCACAGCTTGGATCTTCGGA
CCATTGATGGTCGTTCCGTTCACAGCCTATCTGGGCTGCGCCCTGTACTC
GGTGCAGAAGGCCTTCGACAGGATGCGCAAGGAGGAGCCACCGGCATATG
CCAGCTTGTCCGACAAGAAGGAGTTCATCAATCACATATAGATACATATA
TAAGCAATTTCAATACAAACAAAAAAAAGATTAAAGGTAGATCAGATAGC
TGGAAAATAAAAGCTCATTTTAAGTGCTATTCAAACGAAACAAAAAAAAA
AAAAAAAAAAGCTTTCTAGACCAT
BS19522.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:52:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12825-RA | 435 | CG12825-PA | 1..435 | 57..491 | 2175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12825-RA | 585 | CG12825-RA | 11..585 | 17..591 | 2875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7789770..7789991 | 373..594 | 1110 | 100 | Plus |
2R | 25286936 | 2R | 7789216..7789358 | 17..159 | 715 | 100 | Plus |
2R | 25286936 | 2R | 7789570..7789712 | 233..375 | 700 | 99.3 | Plus |
2R | 25286936 | 2R | 7789421..7789500 | 160..239 | 400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:52:39 has no hits.
BS19522.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:37:46 Download gff for
BS19522.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12825-RA | 3..577 | 17..591 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:58:54 Download gff for
BS19522.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12825-RA | 11..585 | 17..591 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:22:03 Download gff for
BS19522.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12825-RA | 11..585 | 17..591 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:22:03 Download gff for
BS19522.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7789216..7789358 | 17..159 | 100 | -> | Plus |
2R | 7789421..7789500 | 160..239 | 100 | -> | Plus |
2R | 7789577..7789712 | 240..375 | 100 | -> | Plus |
2R | 7789773..7789988 | 376..591 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:58:54 Download gff for
BS19522.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3676721..3676863 | 17..159 | 100 | -> | Plus |
arm_2R | 3676926..3677005 | 160..239 | 100 | -> | Plus |
arm_2R | 3677082..3677217 | 240..375 | 100 | -> | Plus |
arm_2R | 3677278..3677493 | 376..591 | 100 | | Plus |
BS19522.pep Sequence
Translation from 56 to 490
> BS19522.pep
MWKLDTKGGIICSGCLSIAFAITYLVLMDDYFWKYGLYEMGIHISALQIL
GSVVLIVGAIKQKHKFFVPWMITTGFFLYLMVNLFISLIVQGTAWIFGPL
MVVPFTAYLGCALYSVQKAFDRMRKEEPPAYASLSDKKEFINHI*
BS19522.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:08:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12825-PA | 144 | CG12825-PA | 1..144 | 1..144 | 761 | 100 | Plus |
CG12824-PB | 142 | CG12824-PB | 1..142 | 1..144 | 327 | 49 | Plus |
CG12824-PA | 87 | CG12824-PA | 1..62 | 1..64 | 151 | 50 | Plus |