BS19529.complete Sequence
998 bp assembled on 2011-01-27
GenBank Submission: KX800192
> BS19529.complete
GAAGTTATCAGTCGACATGAGCTTCCTGGAGTTTCTGCTGCTCCTGCTCG
TGCTGTACTATGTCGTGTACGTGCTCCTCTGGATCCTGCTCGACTGCAAT
GTGGCCCTGTGGTACAAGTCCCGTTTCGGAGTCTCGCTGTCGTCGATGCG
CGGACAGGTGGTTTGGATAACTGGTGCCTCGAGCGGAATTGGCCGCGCTT
TGGCGCTCAGCTTGGCCAGGCATGGAGTGAAATTGGTGCTAAGTGCCCGG
CGACTGGAGCAATTGGAGCAAGTGCAAGAGGAATGCCTAGCTGCAGCTCG
CGGACTGCTGGCCACCAAGGACGTGCTGGTCATTCAAATGGACATGCTCG
ATCTCGACGAGCATAAGACGCATCTCAACACGGTGCTCAATCACTTTCAT
CGACTGGATGTCCTTGTCAATAATGCTGGCCGATCCCAGCGAGCCAGTTG
GACCGAAGTCGAGATCGAGGTGGACCGGGAGCTGTTCGAACTGGATGTCT
TTGCGGTGGTCCACCTCAGCCGCCTGGTGGTGCGCTATTTCGTGGAGCAG
AACGGCGGTAGAGGACACATCGCTGCCACCTCCAGCATCGCCGGCTTCAG
TCCAGTGCCATTTTCACCCACCTACTGTGCCGCCAAGCACGCCCTTAACG
CCTACTTGCTCTCCCTGAAAGTGGAGATGCGCAAGCTGGATGTGTCGCTC
TTCGCACCGGGACCCATAGCCACCGATTTCCTGCAGGAGGCCTTCACTGG
CTCGCAGGGCGGAAAGGTGGGTCTGAGTACGGCCAATCAGAAACGGATGA
CGGCCCAGAGATGTGGCGATCTGTTCGCCGTTGCCTTGGCCAATAAGATG
GATCTCACCTGGTGCGGCCTCTTTCCCGTCAACCTCTTGGCCTACTGCGC
CCGGAATCCCACGCTGAGCAAGATTCTGGCTCAATTGATGACCGAGAAGA
CGCTGAACAAGATTCGCGAGGGCAAACTGTGAAAGCTTTCTAGACCAT
BS19529.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:56:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31937-RA | 966 | CG31937-PA | 1..966 | 17..982 | 4830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:56:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31937-RA | 1184 | CG31937-RA | 94..1063 | 13..982 | 4835 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:56:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1729980..1730949 | 13..982 | 4835 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:56:17 has no hits.
BS19529.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:38 Download gff for
BS19529.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31937-RA | 39..1003 | 17..981 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:06:25 Download gff for
BS19529.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31937-RA | 98..1062 | 17..981 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:52:12 Download gff for
BS19529.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31937-RA | 98..1062 | 17..981 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:52:12 Download gff for
BS19529.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1729984..1730948 | 17..981 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:06:25 Download gff for
BS19529.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1729984..1730948 | 17..981 | 100 | | Plus |
BS19529.pep Sequence
Translation from 16 to 981
> BS19529.pep
MSFLEFLLLLLVLYYVVYVLLWILLDCNVALWYKSRFGVSLSSMRGQVVW
ITGASSGIGRALALSLARHGVKLVLSARRLEQLEQVQEECLAAARGLLAT
KDVLVIQMDMLDLDEHKTHLNTVLNHFHRLDVLVNNAGRSQRASWTEVEI
EVDRELFELDVFAVVHLSRLVVRYFVEQNGGRGHIAATSSIAGFSPVPFS
PTYCAAKHALNAYLLSLKVEMRKLDVSLFAPGPIATDFLQEAFTGSQGGK
VGLSTANQKRMTAQRCGDLFAVALANKMDLTWCGLFPVNLLAYCARNPTL
SKILAQLMTEKTLNKIREGKL*
BS19529.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31937-PA | 321 | CG31937-PA | 1..321 | 1..321 | 1626 | 100 | Plus |
| CG7601-PA | 326 | CG7601-PA | 17..263 | 12..256 | 302 | 33.1 | Plus |
| CG40485-PB | 247 | CG40485-PB | 8..210 | 48..245 | 221 | 29.7 | Plus |
| CG40485-PA | 231 | CG40485-PA | 8..183 | 48..222 | 206 | 30.8 | Plus |
| rdhB-PB | 248 | CG7077-PB | 8..202 | 45..239 | 203 | 30 | Plus |
