BS19530.complete Sequence
350 bp assembled on 2011-01-27
GenBank Submission: KX802911
> BS19530.complete
GAAGTTATCAGTCGACATGGGAGCATTGGCAGAGCTGGCTGGTGATGAGA
AAAACGGCGAAGGATCTCGTACTTTTGTGTTCACCAACGAGGGCCACACG
CTGGGAAATGCGCTGAAAACGATCATAGCCCGCTACCCGGAGGTGGATTT
CTGTGGCTACACGATTCCGCATCCCACGGAGCAGAAGCTGCACTTCCGCA
TTCAATCCCGTCGAGACAGAGCCATAGATATACTTAAACGGGGACTGGAG
GATCTGGAGGGTCTGTGTGATCATACAATCGTTACGTTCGAAAAGGAGAT
GGCCGAGTTTAATGCAATGAAAGTGGAAAATTAGAAGCTTTCTAGACCAT
BS19530.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:56:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)37Cg-RA | 318 | CG10685-PA | 1..318 | 17..334 | 1590 | 100 | Plus |
l(2)37Cg-RD | 399 | CG10685-PD | 99..399 | 34..334 | 1505 | 100 | Plus |
l(2)37Cg-RC | 351 | CG10685-PC | 52..351 | 35..334 | 1500 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:56:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)37Cg-RA | 404 | CG10685-RA | 58..376 | 17..335 | 1595 | 100 | Plus |
l(2)37Cg-RD | 681 | CG10685-RD | 352..653 | 34..335 | 1510 | 100 | Plus |
l(2)37Cg-RC | 633 | CG10685-RC | 305..605 | 35..335 | 1505 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:56:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19133051..19133353 | 335..33 | 1515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:56:45 has no hits.
BS19530.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:39 Download gff for
BS19530.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)37Cg-RA | 58..375 | 17..334 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:06:36 Download gff for
BS19530.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)37Cg-RA | 58..375 | 17..334 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:52:25 Download gff for
BS19530.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)37Cg-RA | 58..375 | 17..334 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:52:25 Download gff for
BS19530.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19133052..19133351 | 35..334 | 100 | <- | Minus |
2L | 19133409..19133426 | 17..34 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:06:36 Download gff for
BS19530.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19133052..19133351 | 35..334 | 100 | <- | Minus |
arm_2L | 19133409..19133426 | 17..34 | 100 | | Minus |
BS19530.pep Sequence
Translation from 16 to 333
> BS19530.pep
MGALAELAGDEKNGEGSRTFVFTNEGHTLGNALKTIIARYPEVDFCGYTI
PHPTEQKLHFRIQSRRDRAIDILKRGLEDLEGLCDHTIVTFEKEMAEFNA
MKVEN*
BS19530.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)37Cg-PA | 105 | CG10685-PA | 1..105 | 1..105 | 551 | 100 | Plus |
l(2)37Cg-PC | 116 | CG10685-PC | 18..116 | 7..105 | 523 | 100 | Plus |
l(2)37Cg-PD | 132 | CG10685-PD | 34..132 | 7..105 | 523 | 100 | Plus |