Clone BS19531 Report

Search the DGRC for BS19531

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:195
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptCG15167-RA
Protein status:BS19531.pep: full length peptide match
Sequenced Size:383

Clone Sequence Records

BS19531.complete Sequence

383 bp assembled on 2011-01-27

GenBank Submission: KX804638

> BS19531.complete
GAAGTTATCAGTCGACATGTCGCTGGAACTGGTACTCCAACCGCAGCCAG
AGATCTACCTATTAGCGTATGAAATGAGTGTGCCCGAAGATTCCGATGAG
GCCCTGCTTTCAGTTGTGGCCCACAAAGCCGCAGAACTTAAGGTGTGTGG
CTACATCGCGCATACGCACTGTGGCCGCAAAGTGGGCGGCGAACTGGAGG
GCAGCTCTGCTGGCCTGCAGATGATGGTCGAGTGGATGCAGGCTAGGAGC
CAGGGGAATCATCTCGGGGACGGGGAGAAGATCAAAAGCCAGATGAAGGA
GCCACGATTCTCGAAGTGGAAGCTGCAATCAGGGGCCCCCAAATACGATG
TTTTCTTCTGTTGCTGAAAGCTTTCTAGACCAT

BS19531.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:56:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG15167-RA 351 CG15167-PA 1..351 17..367 1755 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:56:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG15167-RA 450 CG15167-RA 53..403 17..367 1755 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:56:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18740410..18740760 17..367 1755 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:56:53 has no hits.

BS19531.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:39 Download gff for BS19531.complete
Subject Subject Range Query Range Percent Splice Strand
CG15167-RA 53..402 17..366 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:06:40 Download gff for BS19531.complete
Subject Subject Range Query Range Percent Splice Strand
CG15167-RA 53..402 17..366 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:52:30 Download gff for BS19531.complete
Subject Subject Range Query Range Percent Splice Strand
CG15167-RA 53..402 17..366 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:52:30 Download gff for BS19531.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18740410..18740759 17..366 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:06:40 Download gff for BS19531.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18740410..18740759 17..366 100   Plus

BS19531.pep Sequence

Translation from 16 to 366

> BS19531.pep
MSLELVLQPQPEIYLLAYEMSVPEDSDEALLSVVAHKAAELKVCGYIAHT
HCGRKVGGELEGSSAGLQMMVEWMQARSQGNHLGDGEKIKSQMKEPRFSK
WKLQSGAPKYDVFFCC*

BS19531.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG15167-PA 116 CG15167-PA 1..116 1..116 614 100 Plus