BS19533.complete Sequence
635 bp assembled on 2011-01-27
GenBank Submission: KX804757
> BS19533.complete
GAAGTTATCAGTCGACATGCATCTAAACGAGAACACCAAAATACTGGGTC
ACAGGGTCATCCTTGTGCCCTACGAAGCGCGCCACGTGCCCAAGTACCAC
GAGTGGATGAGCAACGAGACCCTGAGGGAGTTGACCGCATCCGAGGAACT
GACCTTAGAAGAGGAGCACGAGATGCAAAGGAGTTGGAGGGAGGACAGCG
ACAAGCTGACCTTCATTGTCCTGGATGCAGAGACTTATTCGCGTGATCAG
GATGAGATTGCCGCCATGGTGGGCGACACCAATCTCTTCCTGCACCAAGA
TCCCGATAGCCAGATACCAACGGCGGAGGCGGAAATCATGATTGCCGAAC
CTTATGCACGGGGCAAGGGATTCGGCAGGGAAGCCATGCTCCTCATGCTC
AAGTACGCCCAATCGCAGCCCCAGCTTAAATTGGATAAATTCGAGGTCAA
GATCGACATGGACAACGCTGCATCGCTGCATTTGTTTAAGAGTTTTATGT
TCGTGGAGACGCGTCGAGTGGAGATCTTCCACGAGGTCACCCTGGAGCGA
CCTATCACTCCAGATTGGATCAACTGGCTGGACCAGCAGGTGGATCTGCG
TATGCAGTGCTATCAGTGAAAGCTTTCTAGACCAT
BS19533.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:57:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11539-RB | 603 | CG11539-PB | 1..603 | 17..619 | 3015 | 100 | Plus |
CG11539-RA | 603 | CG11539-PA | 1..603 | 17..619 | 3015 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:57:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11539-RB | 810 | CG11539-RB | 91..695 | 17..621 | 3025 | 100 | Plus |
CG11539-RA | 737 | CG11539-RA | 18..622 | 17..621 | 3025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:57:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31615399..31616003 | 621..17 | 3025 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:57:21 has no hits.
BS19533.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:41 Download gff for
BS19533.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11539-RA | 18..619 | 17..618 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:06:46 Download gff for
BS19533.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11539-RA | 18..619 | 17..618 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:52:45 Download gff for
BS19533.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11539-RA | 18..619 | 17..618 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:52:45 Download gff for
BS19533.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31615402..31616003 | 17..618 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:06:46 Download gff for
BS19533.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27441124..27441725 | 17..618 | 100 | | Minus |
BS19533.pep Sequence
Translation from 16 to 618
> BS19533.pep
MHLNENTKILGHRVILVPYEARHVPKYHEWMSNETLRELTASEELTLEEE
HEMQRSWREDSDKLTFIVLDAETYSRDQDEIAAMVGDTNLFLHQDPDSQI
PTAEAEIMIAEPYARGKGFGREAMLLMLKYAQSQPQLKLDKFEVKIDMDN
AASLHLFKSFMFVETRRVEIFHEVTLERPITPDWINWLDQQVDLRMQCYQ
*
BS19533.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11539-PB | 200 | CG11539-PB | 1..200 | 1..200 | 1049 | 100 | Plus |
CG11539-PA | 200 | CG11539-PA | 1..200 | 1..200 | 1049 | 100 | Plus |