BS19535.complete Sequence
644 bp assembled on 2011-01-27
GenBank Submission: KX804965
> BS19535.complete
GAAGTTATCAGTCGACATGATCAATCCCCAACTTTTGCTGATCGCCGCGC
TTATTGCGTTTATTGGGAAAGTGGCACACGCTCAAATCGCCTTTGTTGAG
GATCAAGACATTGATAAGAAGAAGGCCAACCTTGCGGGTCGCAAGCCACT
GTATTCGCCAGCCCGATGCCCCAAGCACCAGCTTCTTTATCCGGGGGACC
AGCAGAAGCAGAACGACTGGGTTTGCGACTGCGCGCCAGCCACACTGTAT
TACCCGGAGACCGATGGCTGCTATCCGGCCTACCGACAGGGACCCTGTGA
GGCTGGACAGATTCTGGTGCTCTACAAGGAGGAGATCATCCCGAAGTGCG
TACGAAATCCATGTAACAGGGACGGACACTTTATGATTCGCGACACATGC
TATGAGTTCGGAAACACCAAGAAGGAAGAAAACCCGTGTCCTTACCAGGA
GGCTTCCTTTGTACTTGGCGTGAATCCCACCAACTTGATGGTGGACTGTG
TGAAGCTGTCCGTTCAACTGGAGACGCGTATTTCGGACACGGAGCAGGCT
CCGCCGGAATACTACGTTGATTTGGCCGAGAAATGCGCACGCGGCAGTCG
CCTAATGGCTCAGGGAAAGTGTCCTTAAAAGCTTTCTAGACCAT
BS19535.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:54:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12811-RA | 612 | CG12811-PA | 1..612 | 17..628 | 3060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:54:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12811-RA | 1002 | CG12811-RA | 262..874 | 17..629 | 3065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:54:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10047380..10047771 | 629..238 | 1960 | 100 | Minus |
3R | 32079331 | 3R | 10048416..10048536 | 137..17 | 605 | 100 | Minus |
3R | 32079331 | 3R | 10047841..10047944 | 239..136 | 520 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:54:55 has no hits.
BS19535.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:36 Download gff for
BS19535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12811-RA | 32..641 | 17..626 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:06:05 Download gff for
BS19535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12811-RA | 262..871 | 17..626 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:51:40 Download gff for
BS19535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12811-RA | 262..871 | 17..626 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:51:40 Download gff for
BS19535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10047841..10047943 | 137..239 | 100 | <- | Minus |
3R | 10048417..10048536 | 17..136 | 100 | | Minus |
3R | 10047383..10047769 | 240..626 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:06:05 Download gff for
BS19535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5873105..5873491 | 240..626 | 100 | <- | Minus |
arm_3R | 5873563..5873665 | 137..239 | 100 | <- | Minus |
arm_3R | 5874139..5874258 | 17..136 | 100 | | Minus |
BS19535.pep Sequence
Translation from 16 to 627
> BS19535.pep
MINPQLLLIAALIAFIGKVAHAQIAFVEDQDIDKKKANLAGRKPLYSPAR
CPKHQLLYPGDQQKQNDWVCDCAPATLYYPETDGCYPAYRQGPCEAGQIL
VLYKEEIIPKCVRNPCNRDGHFMIRDTCYEFGNTKKEENPCPYQEASFVL
GVNPTNLMVDCVKLSVQLETRISDTEQAPPEYYVDLAEKCARGSRLMAQG
KCP*
BS19535.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12811-PA | 203 | CG12811-PA | 1..203 | 1..203 | 1109 | 100 | Plus |