BS19538.complete Sequence
641 bp assembled on 2011-01-27
GenBank Submission: KX800304
> BS19538.complete
GAAGTTATCAGTCGACATGTTCCGCACTTTTCCTCTGCTCTGTTTGCTGT
TCCTTACGGCTGTCCGTTCCGAAAACTGTGATCAGGATGCCGGTGCCACG
CTATATTGTCGCGGTGAACGAGCTCTGCGAAATGTCTTGCGGAATTTAAA
TCGCAGTGATAAACCCCTTGTGGTGATTAGAGGATTGGAGATAGTTCCGC
TGCAGAACAATTCAATTTCTGATGAGGAGCCGGATCAGGAGCAGGGTCTT
TTGGACAGTCTATCCTTCTATCTGCGCACCCACGAAATCAATGTAAAGCT
GGCAGATCTCCTGGAGGACGAGTCCCAAGTTTCAGAAGCCCGCAAAAAGG
ACAAGGGCCAGGGAATGCTGTTGGCAATGGCTCTGATGTTTGGCAAGATG
ATGGCCGTAATGGGGTTGGGCGGCATCGCGGCATTGGCCATGAAGGCACT
GGGCGTGTCCTTGGTGGCTCTGATGATGGCCGGGATGCTGGGTCTTAAGA
CAGCCGCCCAGCATGGCGGAGAGTCTAGTCACAGCATATCGTATGTGACC
GGCGAGGGACATCACCACAAACGGAGGCGCCGCTCGTCCGGCCAACAACC
CTTGGCTTACAGAGGCTGGGACTGAAAGCTTTCTAGACCAT
BS19538.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:38:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi5-RA | 609 | CG15590-PA | 1..609 | 17..625 | 3045 | 100 | Plus |
| Osi5-RB | 606 | CG15590-PB | 1..606 | 17..625 | 2965 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:38:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi5-RA | 892 | CG15590-RA | 193..803 | 15..625 | 3055 | 100 | Plus |
| Osi5-RB | 889 | CG15590-RB | 193..800 | 15..625 | 2975 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:38:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6227704..6228024 | 15..335 | 1605 | 100 | Plus |
| 3R | 32079331 | 3R | 6228443..6228739 | 329..625 | 1485 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:38:10 has no hits.
BS19538.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:42 Download gff for
BS19538.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi5-RA | 317..919 | 22..624 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:40:39 Download gff for
BS19538.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi5-RA | 200..802 | 22..624 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:18 Download gff for
BS19538.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi5-RA | 200..802 | 22..624 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:18 Download gff for
BS19538.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6227711..6228024 | 22..335 | 100 | -> | Plus |
| 3R | 6228450..6228738 | 336..624 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:40:39 Download gff for
BS19538.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2054172..2054460 | 336..624 | 100 | | Plus |
| arm_3R | 2053433..2053746 | 22..335 | 100 | -> | Plus |
BS19538.pep Sequence
Translation from 16 to 624
> BS19538.pep
MFRTFPLLCLLFLTAVRSENCDQDAGATLYCRGERALRNVLRNLNRSDKP
LVVIRGLEIVPLQNNSISDEEPDQEQGLLDSLSFYLRTHEINVKLADLLE
DESQVSEARKKDKGQGMLLAMALMFGKMMAVMGLGGIAALAMKALGVSLV
ALMMAGMLGLKTAAQHGGESSHSISYVTGEGHHHKRRRRSSGQQPLAYRG
WD*
BS19538.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi5-PA | 202 | CG15590-PA | 1..202 | 1..202 | 1025 | 100 | Plus |
| Osi5-PB | 201 | CG15590-PB | 1..201 | 1..202 | 1008 | 99.5 | Plus |
| Osi8-PA | 274 | CG15591-PA | 130..260 | 66..201 | 144 | 31.9 | Plus |
