BS19539.complete Sequence
695 bp assembled on 2011-01-27
GenBank Submission: KX806085
> BS19539.complete
GAAGTTATCAGTCGACATGGAGTTACGCAGCCGAACAAACAGGAGATTAG
TTGACTTCCTCAAAAGCGCAGGCGTTTACGAGGAAGGCATGGATATTGAG
GAAATGACCGAATTAGCAAGTGTCGTGCAGCAATCAGCTAGTATCAGTCC
CCAGGATGAGGATCTAGAAAGGGCTCTGCACGAGAGCGAGTCTGATTTTT
TGACTTCGCATCCCAGTGCTTTGCACAACTCCACGATGATCATGTCGCCG
CAAGTGTCCAGAAGAAATCCCTCAGACATGGACAGTCCACCGAGCGAGCC
GATCCGTATAACTTTTCGGGCTTTGGTGCACCGTGCCATGGACTGGAGTC
CCACCACGGGCAATCAAATTCCCGATCGCAAGCGCATTGCTGCGGATCGC
AATCAAAACGTCGAACTAGTTGGCAAACGTTCCAGAGCAACGCCGGCTAT
CAGCATTGGCCAGGCACCGGAGGATGAGCCGCACAATGCCGACGCCACAC
CCGTTTCCCCGGGCAACGAATGCGACTCCGGCGTCAGCTGGGAGGAGATA
TCTTTGTCCAGCGCCAGCGATAGCACCACTCTTCCTTCCATCGGCGAAAT
GCCCGATCGACATTTAATCAGCACCAGCAGCGTCGCCGTCTCGGATTTCT
CAGATGCCAATGAAATCAGCCAGGAATAGAAGCTTTCTAGACCAT
BS19539.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:38:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14931-RB | 663 | CG14931-PB | 1..663 | 17..679 | 3315 | 100 | Plus |
CG14931-RC | 672 | CG14931-PC | 1..672 | 17..679 | 3190 | 98.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:38:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14931-RB | 912 | CG14931-RB | 106..768 | 17..679 | 3315 | 100 | Plus |
CG14931-RC | 1024 | CG14931-RC | 209..880 | 17..679 | 3190 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:38:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11788834..11789331 | 182..679 | 2490 | 100 | Plus |
2L | 23513712 | 2L | 11788653..11788769 | 66..182 | 585 | 100 | Plus |
2L | 23513712 | 2L | 11788542..11788591 | 17..66 | 250 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:38:26 has no hits.
BS19539.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:43 Download gff for
BS19539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14931-RB | 82..744 | 17..679 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:40:45 Download gff for
BS19539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14931-RB | 106..768 | 17..679 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:23 Download gff for
BS19539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14931-RB | 106..768 | 17..679 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:23 Download gff for
BS19539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11788542..11788590 | 17..65 | 100 | -> | Plus |
2L | 11788653..11788768 | 66..181 | 100 | -> | Plus |
2L | 11788834..11789331 | 182..679 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:40:45 Download gff for
BS19539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11788542..11788590 | 17..65 | 100 | -> | Plus |
arm_2L | 11788653..11788768 | 66..181 | 100 | -> | Plus |
arm_2L | 11788834..11789331 | 182..679 | 100 | | Plus |
BS19539.pep Sequence
Translation from 16 to 678
> BS19539.pep
MELRSRTNRRLVDFLKSAGVYEEGMDIEEMTELASVVQQSASISPQDEDL
ERALHESESDFLTSHPSALHNSTMIMSPQVSRRNPSDMDSPPSEPIRITF
RALVHRAMDWSPTTGNQIPDRKRIAADRNQNVELVGKRSRATPAISIGQA
PEDEPHNADATPVSPGNECDSGVSWEEISLSSASDSTTLPSIGEMPDRHL
ISTSSVAVSDFSDANEISQE*
BS19539.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14931-PB | 220 | CG14931-PB | 1..220 | 1..220 | 1117 | 100 | Plus |
CG14931-PC | 223 | CG14931-PC | 1..223 | 1..220 | 1103 | 98.7 | Plus |