BS19540.complete Sequence
473 bp assembled on 2011-01-27
GenBank Submission: KX802913
> BS19540.complete
GAAGTTATCAGTCGACATGCCCGACAAAAGGCCACTGGATCCACTCCAGC
CGGTGCTCTACATTGACCACTGCCGTTATCGTCAAACTTATCGCAAGCGA
GCCCTGCACCTCCATTCTTCGCTGGCGGAGGCTCTGAGGGCCATTCAGCC
AAGGGTTAAGCTCCAGCTAAGGATCAACGACAAAGGCCCGCCCGAAGATG
GATCCTTTGAGGTTGCTATTGCTCCGCAACCAACCGATGATTCCACGGCC
CGTCAAAGTGTATGGACTGGACTAAGGCGGATGCCCAGTGCATCGAAGGT
TCCCCATGTGGACGACATTCTCACCCCAGTTTGTTTCGCCCTCAAACTGA
GGGATCCGCACAAGGAATCACATCGGCGGATGCTAACCAATTTGCGGCAC
AACGAAGGCAGTCGACCAAGGACGAGGACTATAAAAAATGTGTTAAATAA
TACCTAGAAGCTTTCTAGACCAT
BS19540.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:38:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15147-RA | 441 | CG15147-PA | 1..441 | 17..457 | 2205 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:38:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15147-RA | 636 | CG15147-RA | 164..604 | 17..457 | 2205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:38:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 17625778..17626218 | 457..17 | 2205 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:38:36 has no hits.
BS19540.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:04:44 Download gff for
BS19540.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15147-RA | 129..569 | 17..457 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:40:49 Download gff for
BS19540.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15147-RA | 129..569 | 17..457 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:27 Download gff for
BS19540.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15147-RA | 164..604 | 17..457 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:27 Download gff for
BS19540.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 17625778..17626218 | 17..457 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:40:49 Download gff for
BS19540.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 17625778..17626218 | 17..457 | 100 | | Minus |
BS19540.pep Sequence
Translation from 16 to 456
> BS19540.pep
MPDKRPLDPLQPVLYIDHCRYRQTYRKRALHLHSSLAEALRAIQPRVKLQ
LRINDKGPPEDGSFEVAIAPQPTDDSTARQSVWTGLRRMPSASKVPHVDD
ILTPVCFALKLRDPHKESHRRMLTNLRHNEGSRPRTRTIKNVLNNT*
BS19540.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:50:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15147-PA | 146 | CG15147-PA | 1..146 | 1..146 | 773 | 100 | Plus |
BthD-PA | 249 | CG11177-PA | 22..127 | 7..117 | 163 | 36.6 | Plus |